mRNA_Ecto-sp13_S_contig11560.1360.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: D7FYT3_ECTSI (Dynein heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT3_ECTSI) HSP 1 Score: 789 bits (2038), Expect = 7.000e-258 Identity = 393/398 (98.74%), Postives = 394/398 (98.99%), Query Frame = 3
Query: 3 ILSGHMLGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHLSEFQAEMFKQPVIFTTFCGKGTSSAYTCVPDVPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVELGELSVKESLAVHMAEEHLSVTKASTEYYE 1196
ILSGHMLGWG SINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSA IE+ARLWVHECERVFRDRIISAPEMEVLDGMMGE AKKHLSEFQAEMFKQPVIFTTFCGKGTSSAYTCVPD PTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVELGELSVKESLAVHMAEEHLSVTKASTEYYE
Sbjct: 2527 ILSGHMLGWGDSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAPIEIARLWVHECERVFRDRIISAPEMEVLDGMMGEVAKKHLSEFQAEMFKQPVIFTTFCGKGTSSAYTCVPDAPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVELGELSVKESLAVHMAEEHLSVTKASTEYYE 2924
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: A0A835YNN0_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN0_9STRA) HSP 1 Score: 560 bits (1443), Expect = 5.640e-178 Identity = 270/401 (67.33%), Postives = 330/401 (82.29%), Query Frame = 3
Query: 3 ILSGHMLGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYS-AQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHLSEFQAEMFKQPVIFTTFCGK--GTSSAYTCVPDVPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVELGELSVKESLAVHMAEEHLSVTKASTEYYE 1196
I +GH+ G+ + M R+VDASI +H +V+ KFLPSAVKFTYNWNMREL+N+F G+ A S A + +ARLW+HECERVFRDR+++ ++ D M+ + +KKHL+E Q MF++PV+FT F GK G Y+ VP + LK LDGKLQEYNESN MMDLVLF+QAMEHVTRICRII RPSGNAMLIGVGGSGKQSLSRL+AFICGF+VRQL+VT+ FKV+DLKEAL+EMF+TAGVKG PL+ LMTDGQIV++ FLI IN ILANGW+SDLF KDE + L+G LRNEAKA G+PDTPE+ ++FL+ R+K+NLHV LCFSPVGD+FRIRARRFPGLINCT++DFFHPWPR+ALISVA+RFL DV+LG+ K SLA+HMAEEHLSVT+ S +YY+
Sbjct: 2592 IFAGHLTGFPAAAAAMSERIVDASIALHRLVAEKFLPSAVKFTYNWNMRELSNVFAGMLLATPGSGGGAPLALARLWLHECERVFRDRLLTEEDLAGFDVMLQDVSKKHLTELQTGMFERPVVFTDFAGKASGGGGDYSAVPSIAKLKQVLDGKLQEYNESNAMMDLVLFEQAMEHVTRICRIIGRPSGNAMLIGVGGSGKQSLSRLSAFICGFDVRQLAVTASFKVEDLKEALREMFRTAGVKGNPLMLLMTDGQIVDDHFLISINAILANGWVSDLFAKDEVDQLLGGLRNEAKACGVPDTPESMMDFLVQRVKANLHVVLCFSPVGDVFRIRARRFPGLINCTTIDFFHPWPREALISVASRFLADVDLGDEETKTSLALHMAEEHLSVTQTSKDYYD 2992
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: A0A482RYG8_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RYG8_9ARCH) HSP 1 Score: 488 bits (1257), Expect = 5.130e-153 Identity = 244/399 (61.15%), Postives = 304/399 (76.19%), Query Frame = 3
Query: 3 ILSGHMLGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHLS-EFQAEMFKQPVIFTTFCGKGTSSAYTCVPDVPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVELGELSVKESLAVHMAEEHLSVTKASTEYYE 1196
IL+GH++G+ I R+V+AS++++ VS KFLPSA+KFTYNWN+RELTNIFQG+C Q Y+ ++ ++W+HE RV DR + PE++V D ++ + KK L Q E+ Q +I+T+F T ++Y VP + LK +D KL EYNESN MMDLVLF+QA EH+ RI RII PSGNAMLIGVGGSGKQSLSRLAAFI G+EVRQL VT F+VDDL EA +EMFK AGVKG +LFLMTD Q+V+ERFLIYIN IL++ WIS LFPKDE +G++G LRNEAKA GIPD EA + FLISRI++NLHV LCFSPVGDIFR+RARRFP LI T++DFFHPWPR+ALISVA +FL +V+L +++ LAVHMAEEHLSVT+ S YYE
Sbjct: 2633 ILAGHVMGFPQQIMDSVDRIVEASLVLYDEVSKKFLPSALKFTYNWNLRELTNIFQGICMIRQGEYNTFQDMVKIWIHEFSRVISDRFFTIPELDVYDAILRDVMKKQLGIANQDEILGQTLIYTSFAAT-TVNSYLPVPSMEHLKKVVDNKLAEYNESNAMMDLVLFEQAAEHIARISRIISNPSGNAMLIGVGGSGKQSLSRLAAFINGYEVRQLQVTGSFRVDDLLEAFREMFKQAGVKGIQILFLMTDTQVVDERFLIYINAILSSSWISGLFPKDEIDGMLGNLRNEAKANGIPDVQEAMIAFLISRIRTNLHVVLCFSPVGDIFRVRARRFPALIMSTAIDFFHPWPREALISVAFKFLGEVDLPTSDIRDQLAVHMAEEHLSVTERSKRYYE 3030
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: A0A7S3HP77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HP77_9STRA) HSP 1 Score: 486 bits (1250), Expect = 6.630e-153 Identity = 236/400 (59.00%), Postives = 306/400 (76.50%), Query Frame = 3
Query: 3 ILSGHMLGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHLS-EFQAEMFKQPVIFTTFCGKGTSSAYTCVPDVPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVE-LGELSVKESLAVHMAEEHLSVTKASTEYYE 1196
+++GH++G+ + ++V+AS++++ VS KFLPSAVKFTYNW++RELTNIFQG+C D Y+ Q++V +LW+HE RV DR + PE++V D ++ E KK L+ Q ++ + +I+TTF S Y + D+ LK +D KL +YNESN MMDLVLF+QA +H+ RI RII PSGNAMLIGVGGSGKQSLSRLAAFI +EVRQL VT F+VDDL EA +E+FK GVKG ++FLMTD Q+V+ERFLIYIN IL++GWIS LFPKDE +G++G +RN+AKAAG+PD PEA L F I R+++NLHV LCFSPVGDIFR+RARRFP LI T++DFFHPWPR+ALISVAA+FL +VE L +++ +LAVHMAEEHLSVT S +YYE
Sbjct: 845 LMAGHVMGFTNQVCDSVPKIVEASLVLYEEVSKKFLPSAVKFTYNWSLRELTNIFQGICLMKSDDYTTQLDVVKLWIHEFARVVSDRFFTTPELDVYDAILREVMKKQLNISNQDDILNKAIIYTTFANSAAGS-YLPITDIDQLKKVVDSKLVDYNESNAMMDLVLFEQAAQHICRISRIISNPSGNAMLIGVGGSGKQSLSRLAAFINNYEVRQLQVTGSFRVDDLLEAFREIFKQCGVKGIQIVFLMTDTQVVDERFLIYINAILSSGWISGLFPKDEIDGMLGNIRNDAKAAGVPDVPEAMLAFFIQRVRANLHVVLCFSPVGDIFRVRARRFPALIMNTAIDFFHPWPREALISVAAKFLAEVEDLPSEAIRSNLAVHMAEEHLSVTDLSKKYYE 1243
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: A0A4D9CU04_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU04_9STRA) HSP 1 Score: 485 bits (1248), Expect = 8.330e-152 Identity = 239/417 (57.31%), Postives = 303/417 (72.66%), Query Frame = 3
Query: 3 ILSGHMLGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHLS----EFQAEMFKQPVIFTTFCGKGTSS---------------AYTCVPDVPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVELGELSVKESLAVHMAEEHLSVTKASTEYYE 1196
IL+GH+ G+ + C ++VDA+I +H V +FLPSAVKFTYNWNMREL+N+FQGL A D Y+ + RLW HECERVF DR+ S E + M+ A + S + + ++P++ T F G TSS Y VP + LK TL+GKLQEYNESN MMDLVLFD+AM HVTRICRII PSG+AMLIGVGGSGKQSL+RLAAFICG+EV+QL++TS+FK++DLK+AL++M+K AGVKG PL+FL+ D Q+++ERFLIYIN +L++GWI DL KDE E + ++R A+A G+PDTP LEFLI+RI++NLHV L FSPVG FR RARRFP L+NCT++D FHPWPR+AL+SVA RFL+DV+LG VK LA+HMAEEHLSV KAS + E
Sbjct: 2850 ILAGHLKGFAPRVEECCTKIVDATIALHGQVLQRFLPSAVKFTYNWNMRELSNVFQGLTLARSDLYTTPLPFLRLWAHECERVFGDRLTSESERGIFQDMLTSVANRTFSSPSEDIVESLVQRPLLCTNFVGGITSSESTSGGESAGLTSPMGYVPVPTLTELKTTLNGKLQEYNESNAMMDLVLFDEAMAHVTRICRIISNPSGHAMLIGVGGSGKQSLTRLAAFICGYEVKQLAITSRFKLEDLKDALKDMYKFAGVKGVPLVFLIRDSQVIDERFLIYINALLSSGWIPDLLVKDELESTLASIRTVARAQGVPDTPATLLEFLITRIRTNLHVVLAFSPVGSTFRTRARRFPALVNCTAIDVFHPWPREALVSVAQRFLDDVDLGSPYVKSQLALHMAEEHLSVMKASHTFLE 3266
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: A0A482UH00_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UH00_9ARCH) HSP 1 Score: 441 bits (1135), Expect = 1.840e-145 Identity = 215/405 (53.09%), Postives = 297/405 (73.33%), Query Frame = 3
Query: 3 ILSGHMLGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHLSEFQAE-MFKQPVIFTTFCGK-GTSSAYTCVPDVPT----LKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGI-PDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVELGELSVKESLAVHMAEEHLSVTKASTEYYE 1196
IL+GH+ + + + + +ASI +H +V +KFLP A +F Y+WNMREL N+FQGLC A + Y ++ RLWVHE RVF+DR++ A ++ D + + + + +F P++FT+F + G Y +P L TL KL++YN S+ +MDLVLF QAMEH+ RICRII P+GNAMLIGVGGSGKQSLS+LA+ ICG++VRQLSVTS+F V DLKE+L+EM++TAGVKG L FL+TD QIVN+RFL+Y+NDIL++GWI+DLF +DE + + GALRNEAK+ G+ D P+ L+F ISR+++NLH+ LCFSPVG +FR+RARRFPGLINCT VD FH WP++AL+SVA+RF++D++L ++K+S+A+HMAE HL+VT S ++ E
Sbjct: 124 ILAGHLRAFQPDVQALAGPITEASIKLHKVVVTKFLPDAERFMYSWNMRELANVFQGLCLARAEFYPQPVKFLRLWVHEVLRVFQDRMVDAGDVAQFDTELRGIVRAVWKDIDMDALFAAPLLFTSFAAQTGADPVYLPLPTGEAGSELLSKTLADKLEDYNSSHSIMDLVLFQQAMEHICRICRIISNPAGNAMLIGVGGSGKQSLSKLASHICGYDVRQLSVTSRFTVTDLKESLKEMYRTAGVKGQGLSFLLTDSQIVNDRFLVYVNDILSSGWIADLFERDELDAIYGALRNEAKSQGVMADVPDEMLKFFISRVRNNLHIILCFSPVGAVFRVRARRFPGLINCTVVDKFHAWPQEALVSVASRFIDDLDLVSDTIKQSVALHMAEVHLTVTAVSEDFKE 528
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: A0A5D6Y7I6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7I6_9STRA) HSP 1 Score: 446 bits (1146), Expect = 3.940e-138 Identity = 231/422 (54.74%), Postives = 289/422 (68.48%), Query Frame = 3
Query: 3 ILSGHM--LGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHLSEFQ-AEMFKQPV------------------IFTTFCGK--GTSSAYTCVPDVPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVE-LGELSVKESLAVHMAEEHLSVTKASTEYYE 1196
IL GH G+G + C V SIL+H ++++FLPSA KF YNWNMREL+N+FQGL ++ D + ARLWVHEC RVF DR+I+ ++ + + E AKK L + +F IFTTF G SAY V + L L +L +YN MM+L LFD AMEHVTRICRII P GNAMLIGVGGSGKQSLSRLAA ICGFEVRQLSVTS F+++DLKE L EMFK AG++G PL+FL+TD QIVNERFL+YIND+L++GWI DLFPK++ + L+GALR+EAKA G+PDT + L+FL+ RI+ N + LCFSPVG +FR+RARRFPGL+NCT +D+FHPWPR AL+ VA FL+ VE LG+ +K SLA HMA+ H+SVT S Y+E
Sbjct: 2218 ILKGHFQSAGFGAACAGSCDAFVAVSILLHEDIANRFLPSATKFVYNWNMRELSNVFQGLTRSKGDFFPTAAHFARLWVHECTRVFCDRLINDDDIIKFNDRIREIAKKTLPDVDHVALFNDHTPAAAGDDGSGGTGTTAINIFTTFATPVAGADSAYVAVDSMRQLNKVLVEQLDDYNSKYSMMNLELFDNAMEHVTRICRIIGNPGGNAMLIGVGGSGKQSLSRLAAHICGFEVRQLSVTSNFRIEDLKENLAEMFKVAGIQGLPLVFLITDSQIVNERFLVYINDMLSSGWIPDLFPKEDIDSLLGALRSEAKANGVPDTTDTLLDFLLLRIRLNFRIVLCFSPVGAVFRVRARRFPGLVNCTVIDWFHPWPRDALVRVATSFLDKVEDLGDAPLKRSLANHMADVHISVTDMSRRYFE 2639
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: K0RBF7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RBF7_THAOC) HSP 1 Score: 444 bits (1142), Expect = 3.960e-138 Identity = 224/405 (55.31%), Postives = 287/405 (70.86%), Query Frame = 3
Query: 3 ILSGHMLGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHL--SEFQAE-MFKQPVIFTTFCGKGTSSAYTCVPDVPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVELG----ELSVKESLAVHMAEEHLSVTKASTEYYE 1196
+ GH+ + S+ + ++VD +I ++ VS++FLPSAV+F YNWNMREL NIFQG C A D Y +ARL+ HE RV+ DR+++ E+EV DG E KK+L AE +F ++T F S Y P + LK L+ KL EYNESN +MDLVLF QA+ H+TRI RIIQ P GNAMLIGVGGSGKQSL RLAAFI FEVRQ+SVTS + V+DLKE L+ ++ AGV+G P++FLMTD QIVNE FL+YIN I+ +GWI DLFPK++ + ++G++ NEAK+AG+PDTPE+ + F +S++K NLHV L FSPVGD FR RARRFPGL+N T +D FHPWPR AL+SVA RFL+DVE+ VK +LA+HMAEEHLSV K S + E
Sbjct: 564 VFGGHLSTFQPSMQELTGKIVDTAIQVYEAVSTRFLPSAVRFMYNWNMRELANIFQGCCLAKGDYYIKPAMLARLFTHESHRVYADRLVTEDEIEVFDGFFNEIVKKNLVGPNLSAEDLFGPDNVYTNFVTMSDGS-YLPAPSMEKLKAVLEAKLVEYNESNAIMDLVLFKQAILHITRINRIIQNPGGNAMLIGVGGSGKQSLCRLAAFIGDFEVRQISVTSSYSVEDLKEELRSVYVAAGVRGNPIVFLMTDSQIVNEHFLVYINGIITSGWIPDLFPKEDIDNILGSIANEAKSAGVPDTPESRINFFVSKVKKNLHVVLAFSPVGDTFRTRARRFPGLVNSTVIDQFHPWPRDALVSVAERFLKDVEMSVDESPDEVKRNLAMHMAEEHLSVAKMSQHFLE 967
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: A0A7S2B5T1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5T1_9STRA) HSP 1 Score: 444 bits (1143), Expect = 6.690e-138 Identity = 217/397 (54.66%), Postives = 281/397 (70.78%), Query Frame = 3
Query: 3 ILSGHMLGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHLSEFQAEMFKQPVIFTTFCGKGTSSAYTCVPDVPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVELGELS-VKESLAVHMAEEHLSVTKASTEY 1190
I GH+ G+ + + +V+A+I +H MV +FLPSA+KFTYNWNMREL NIFQ +C + D+Y + + RLWVHE +RVF DR+++ E+EV GM E AKK + +MF+ P++FT F Y + DVP LK LDGKL EYNES MMDLVLFD AM HV RI RII GNAMLIGVGGSGKQSL +LA++I G+EV+++ VT + ++D +E L+ ++ A VK P++FLMTDGQIV E L+YIN IL++GWI LFPK++ +G+ GALR +AK AG+PD PEA EFL+ R ++ L V L FSPVGD R+RARRFPGLINCT++D FHPWPR AL +VA RFL +VE + +K +L+ HMAEEHLSVTK+S Y
Sbjct: 372 IFDGHLQGFNSKCCELSSTLVEATITLHKMVQDRFLPSAIKFTYNWNMRELANIFQNICLSTSDNYQDSMVLLRLWVHETDRVFSDRMLTETEVEVYRGMAQECAKKQFKGMEKQMFEAPLVFTNFANS-LGGLYLPITDVPHLKTVLDGKLIEYNESYAMMDLVLFDMAMFHVARIARIIANSGGNAMLIGVGGSGKQSLCQLASYIAGYEVKRIQVTGNYSIEDFREFLRSIYTAAIVKNNPVVFLMTDGQIVIEEMLVYINAILSSGWIPGLFPKEDMDGIYGALRGQAKTAGVPDNPEAMFEFLVKRSRAQLKVVLAFSPVGDTMRVRARRFPGLINCTAIDKFHPWPRDALENVAVRFLSNVEFDQGDEIKLALSKHMAEEHLSVTKSSEMY 767
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Match: A0A662XP47_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XP47_9STRA) HSP 1 Score: 431 bits (1109), Expect = 8.840e-138 Identity = 223/402 (55.47%), Postives = 281/402 (69.90%), Query Frame = 3
Query: 3 ILSGHM--LGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFQGLCQADQDSYSAQIEVARLWVHECERVFRDRIISAPEMEVLDGMMGEAAKKHLSEF-QAEMFKQ--------------PV-IFTTFCGK--GTSSAYTCVPDVPTLKNTLDGKLQEYNESNPMMDLVLFDQAMEHVTRICRIIQRPSGNAMLIGVGGSGKQSLSRLAAFICGFEVRQLSVTSKFKVDDLKEALQEMFKTAGVKGTPLLFLMTDGQIVNERFLIYINDILANGWISDLFPKDEREGLVGALRNEAKAAGIPDTPEAGLEFLISRIKSNLHVALCFSPVGDIFRIRARRFPGLINCTSVDFFHPWPRQALISVAARFLEDVE-LGELSVKESLAVH 1145
IL GHM G+ + C V+ SIL+H + +KFLPSA KF YNWNMREL+NIFQGL ++ D + + ARLWVHE RVF DR+I+ + + E KK + E Q +F PV IFTTF G S Y VP + L L +L +YN MM+L LFD AMEHVTRICRII P GNAMLIGVGGSGKQSLSRLA+ ICGF+VRQLSVTS F++DDLKE+L EMFK AGV+G PL+FL+TD QIVNERFL+YIND+L++GWI DLFPK++ +GL+GALR+EAKA G+PD +A ++FL+ RI+ N V +CFSPVG +FR+RARRFPGL+NCT +D+FHPWPR AL+ VA+ FLE +E +G++ ++ SLA H
Sbjct: 780 ILKGHMQNAGFVAPVIAACDNFVNVSILLHEEMVNKFLPSATKFVYNWNMRELSNIFQGLTRSKGDFFPNVFQFARLWVHEATRVFCDRLINEDDNVKFGDRIREVTKKTMPELDQVALFNDQPPPAVGTEDSTPTPVNIFTTFATPVAGADSVYIAVPSMKQLNKVLVEQLDDYNSKYSMMNLELFDNAMEHVTRICRIIGNPGGNAMLIGVGGSGKQSLSRLASHICGFDVRQLSVTSNFRIDDLKESLAEMFKVAGVQGLPLVFLITDSQIVNERFLVYINDMLSSGWIPDLFPKEDLDGLLGALRSEAKANGVPDAMDALMDFLLLRIRMNFRVIMCFSPVGAVFRVRARRFPGLVNCTVIDWFHPWPRDALVRVASSFLEKIEDIGDVPLQRSLANH 1181 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11560.1360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11560.1360.1 >prot_Ecto-sp13_S_contig11560.1360.1 ID=prot_Ecto-sp13_S_contig11560.1360.1|Name=mRNA_Ecto-sp13_S_contig11560.1360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=393bp MLGWGGSINTMCARVVDASILIHSMVSSKFLPSAVKFTYNWNMRELTNIFback to top mRNA from alignment at Ecto-sp13_S_contig11560:2199..5372+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11560.1360.1 ID=mRNA_Ecto-sp13_S_contig11560.1360.1|Name=mRNA_Ecto-sp13_S_contig11560.1360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11560:2199..5372+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11560:2199..5372+ >mRNA_Ecto-sp13_S_contig11560.1360.1 ID=mRNA_Ecto-sp13_S_contig11560.1360.1|Name=mRNA_Ecto-sp13_S_contig11560.1360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1179bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11560:2199..5372+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |