mRNA_Ecto-sp13_S_contig11544.1350.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 630 bits (1626), Expect = 5.010e-212 Identity = 314/339 (92.63%), Postives = 324/339 (95.58%), Query Frame = 1
Query: 1 TVMPVDVYGRRLSASDDSDPLRVAKMIGAEDVGDELSVDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCGSDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPMGTNEALRESLGLRHGASLQHDGDGASMVALQELVEFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEVSIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIEIMP 1017
TVMPVDVYGRRLSASD+SDPLRVAKMI AEDVG+ELSVDVDREQAIRFFEEAAER YSQDLKRHNLCAFVGGR EEAMWEVTV SILQFMPG+RVAIAAEAEGLDAYERS+GGLPGVTISST+NPATAALFAD YCG ALILYVEPGSVLSRPF SKDTHSPR DLLVV+TGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLP+GTNEALRESLGLRHGASLQHDGDGAS++ALQELV FDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKE SIWDVPLVKPRYTCAIAP QLEPGSPNTAEVLQSNLDFFSKGGKCANGLI+ MP
Sbjct: 1178 TVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELSVDVDREQAIRFFEEAAERSYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGIRVAIAAEAEGLDAYERSMGGLPGVTISSTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRSDLLVVYTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPVGTNEALRESLGLRHGASLQHDGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPVQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIDFMP 1516
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE) HSP 1 Score: 609 bits (1571), Expect = 7.100e-212 Identity = 302/339 (89.09%), Postives = 319/339 (94.10%), Query Frame = 1
Query: 1 TVMPVDVYGRRLSASDDSDPLRVAKMIGAEDVGDELSVDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCGSDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPMGTNEALRESLGLRHGASLQHDGDGASMVALQELVEFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEVSIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIEIMP 1017
T+MPVDVYGRRLSASD+ DPLRVAKMI AE+VGDE SVDVDR +AIRFFEEAAERP+ QDLKRHNLCAFVGGRV EEAMWEVTVKSILQFMPGMRVAIAAE+EGLDAYERS+GGLPG ISST+N ATAALFAD YCG+ ALILYVEPGSVLSRPF SKDTHSPRGDLLVVHTGS GSYHD+QLRSRSASVLGFDAPSFTHGTDLMLPMGTN+ALRESLG R GASLQHDGDGAS++AL+ELV FD+VSA+PQVLAALAYSRETPGVWFVDPQAWVGQNLFKE SIWDVPLVKPRY CAIAPAQLEPGSPNTA VLQSNLDFFSKGGKCANGLI+IMP
Sbjct: 489 TMMPVDVYGRRLSASDEGDPLRVAKMIEAEEVGDEWSVDVDRVKAIRFFEEAAERPFFQDLKRHNLCAFVGGRVGEEAMWEVTVKSILQFMPGMRVAIAAESEGLDAYERSLGGLPGAAISSTQNSATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSPGSYHDSQLRSRSASVLGFDAPSFTHGTDLMLPMGTNQALRESLGFRLGASLQHDGDGASLIALEELVGFDRVSALPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYMCAIAPAQLEPGSPNTANVLQSNLDFFSKGGKCANGLIDIMP 827
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 577 bits (1488), Expect = 4.300e-192 Identity = 291/346 (84.10%), Postives = 310/346 (89.60%), Query Frame = 1
Query: 1 TVMPVDVYGRRLSASDDSDPLRVAKMIG-------AEDVGDELS-VDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCGSDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPMGTNEALRESLGLRHGASLQHDGDGASMVALQELVEFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEVSIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIEIM 1014
TVMPVDVYGRRL+ D S PLRVAK+ A+DV +EL+ VDVDRE I FFEEAAERPYSQDLKR NLCAFVGGR EEAMW+VTVKSILQF+PGMRVAIAAEAEGLDAYERS+GGLPGVT+S T+NPATAALFAD YCG ALILYVEPGSVLSRPF SKDTHSPRGDLLVVHTGSQGSYHDAQLR RSASVLGFDAPSFTHGTDLMLP+G NE LRESLGLRHGASLQHDGD ASMVALQELVEFDQ SAVPQVLAALAYSR+TPGVWF+DPQAWVGQ+LF+E SIW++PLVKPRYTCAIAPAQLEPGSP TAEVLQSNLDFFS GGKCANGLI+ +
Sbjct: 1114 TVMPVDVYGRRLTPDDGSRPLRVAKIFSVEDSEEEADDVEEELANVDVDREDVISFFEEAAERPYSQDLKRRNLCAFVGGRAGEEAMWDVTVKSILQFVPGMRVAIAAEAEGLDAYERSMGGLPGVTVSGTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSQGSYHDAQLRRRSASVLGFDAPSFTHGTDLMLPVGANEDLRESLGLRHGASLQHDGDWASMVALQELVEFDQFSAVPQVLAALAYSRDTPGVWFLDPQAWVGQHLFQEASIWNIPLVKPRYTCAIAPAQLEPGSPKTAEVLQSNLDFFSMGGKCANGLIDFV 1459
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 455 bits (1171), Expect = 1.880e-148 Identity = 237/346 (68.50%), Postives = 274/346 (79.19%), Query Frame = 1
Query: 10 PVDVYGRRLSASDDSDPLRVAKMIGAEDVGDELS---------VDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCGSDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPMGTNEALRESLGLRHGAS-LQHDGDGASMVALQELVEFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEVSIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIEIMP 1017
PVDVYGRRLSA + ++A+ + AED DE S V+V RE+AIRFFE AAERPY ++ R +LCAFV G V EEAMWEVTVKSILQFMPGM+VAIAAE+EGLDAYERS+G LPGVT+S T+NPATAALFAD YC S LILYV PGSVLSR F KDTHSPRGDLLVVH GSQGSYHD +L RS+SVLGF+ PSFT GTDLMLP N +RE+LGL+ G+ LQ D DG +++ALQE V FDQVSAVPQVLAA+AYSR+TPGVWFVDP+ WVGQNLFKE SIWD+PLVKPR+TC IA +L+ SP TA+VLQ+++ FF+ GGKCANGLI P
Sbjct: 773 PVDVYGRRLSAHPEDRFPQLAQQMEAEDSEDENSEGSYEPRVEVEVGREKAIRFFEAAAERPYLGEINRGDLCAFVSGGVGEEAMWEVTVKSILQFMPGMKVAIAAESEGLDAYERSMGRLPGVTVSGTQNPATAALFADKYC-SFSELILYVRPGSVLSRSFTPKDTHSPRGDLLVVHAGSQGSYHDTELSHRSSSVLGFETPSFTQGTDLMLPGDANYYVREALGLKIGSEGLQEDRDGDAVIALQEFVYFDQVSAVPQVLAAVAYSRKTPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRFTCTIASDKLDSSSPKTAQVLQNSVVFFANGGKCANGLIADAP 1117
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: A0A6H5L131_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE) HSP 1 Score: 440 bits (1132), Expect = 6.000e-147 Identity = 232/348 (66.67%), Postives = 270/348 (77.59%), Query Frame = 1
Query: 1 TVMPVDVYGRRLSASDDSDPLRVAKMIGAEDVGDELS-------VDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCGSDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPMGTNEALRESLGLRHGA-SLQHDGDGASMVALQELVEFDQVSAVPQ----VLAALAYSRETPGVWFVDPQAWVGQNLFKEVSIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIE 1008
TVMPVDV LS ++ L++ + + ED +E+ VD RE I FFEEAAERP+ QDLKR NLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAA A+GLDAYERS+GG PGVTISST+NPATA+LFAD +CG+ ALILYVEPGSVLSRPF KDTHSPRGDLLVVH G QGSY + + RS VLG +APSFT GTDLMLP+G N+ LRESLG+ A S++ DGDGA++ AL E V+F++VS+VPQ +LAALAY+R TPGVWF DPQ W GQ LF+E SIWD+PL KPR+TCAIA LEP S + A LQ+NLDFFS+GGKC +GLIE
Sbjct: 375 TVMPVDVRSLWLSIDNEDYSLQIGQAMEGEDGEEEVEGSFERVGVDGVREGVISFFEEAAERPFFQDLKRGNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGRPGVTISSTQNPATASLFADRFCGAGTALILYVEPGSVLSRPFTFKDTHSPRGDLLVVHGGGQGSYRNDERSRRSGLVLGLEAPSFTRGTDLMLPVGANKDLRESLGMEMQADSVRRDGDGAAVTALAEPVDFEEVSSVPQARNRMLAALAYARNTPGVWFGDPQVWSGQRLFQEASIWDIPLAKPRFTCAIA-LTLEPDSLHAATTLQNNLDFFSRGGKCEDGLIE 721
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: D7FI38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI38_ECTSI) HSP 1 Score: 437 bits (1123), Expect = 2.330e-146 Identity = 233/350 (66.57%), Postives = 269/350 (76.86%), Query Frame = 1
Query: 1 TVMPVDVYGRRLSASDDSDPLRVAKMIGAEDVGDELS-----VDVD--REQAIRFFEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCGSDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPMGTNEALRESLGLR-HGASLQHDGDGASMVALQELVEFDQVSAVPQ----VLAALAYSRETPGVWFVDPQAWVGQNLFKEVSIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIEIM 1014
T MPVDV LS + L++A + AED +E VDVD RE I FFEE AERP+ QDLKR NLCAFV GRVDEEAMWEVTVKSILQFMPGMRVAIAA A+GLDAYERS+GGLPGVTISST NPATA+LFAD +CG+ ALILYVE GSVLSRPF SKDTHSPRGDLLVVH G QGSY D + RS VLG +APSFT GTDL+LP+G N+ LR SLG+ H S++ DG GA+++AL E +F++VSAVPQ +LAALAY+R TPGVWF DP+ WVGQ+LF+E SIWD+PLVKPR+TCAIA A LEP A LQ+NLDFFS+GGKC +GLIE +
Sbjct: 317 TAMPVDVRDLWLSTDSEDHSLQIAHAMEAEDREEEAEGSFERVDVDGIREGVISFFEEEAERPFFQDLKRGNLCAFVSGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGLPGVTISSTHNPATASLFADRFCGAGTALILYVELGSVLSRPFTSKDTHSPRGDLLVVHRGGQGSYRDDERSRRSGLVLGLEAPSFTRGTDLVLPVGANKDLRGSLGMEMHADSVRRDGVGAAVMALTEPADFEEVSAVPQARNRMLAALAYARNTPGVWFGDPKVWVGQHLFQEASIWDIPLVKPRFTCAIALA-LEPDILRAATTLQNNLDFFSRGGKCEDGLIEYL 665
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 460 bits (1184), Expect = 1.290e-145 Identity = 240/347 (69.16%), Postives = 277/347 (79.83%), Query Frame = 1
Query: 10 PVDVYGRRLSASDDSDPLRVAKMIGAEDVGDELS-------VDVD---REQAIRFFEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCGSDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPMGTNEALRESLGLRHGAS-LQHDGDGASMVALQELVEFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEVSIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIEIMP 1017
PVDVYGRRLS D L +A++ AE+ DE S VDV+ RE+A+RFFE AAER Y +++R NLCAFV G EEAMWEVTVKSILQFMPGM+VA+AAEAEGLDAYERS+G LPGVT+S T+NPATA L+AD YC S LILYV+PGSVLSR F SKDTHSPRGDLLVVH GSQGSYHD +L RSASVLGF+APSFT GTDLMLP N LRE+LGL+ G+ LQ DGDG +++ALQ+ V+FDQVSAVPQVLAA+AYSRETPGVWF+DP+ WVGQNLFKE SIWD+PLVKPR+TC IA +L+ SP TAE LQS++DFF+ GGKCANGLI P
Sbjct: 1463 PVDVYGRRLSGHQDFS-LELARLTEAENSEDEDSEDGFEPRVDVEVGGREKAVRFFEAAAERTYLGEVERGNLCAFVSGWAGEEAMWEVTVKSILQFMPGMKVAVAAEAEGLDAYERSMGRLPGVTVSGTQNPATATLYADKYC-SFSELILYVKPGSVLSRSFTSKDTHSPRGDLLVVHAGSQGSYHDTELSRRSASVLGFEAPSFTQGTDLMLPGDANYYLREALGLKIGSDGLQGDGDGDAVIALQKFVDFDQVSAVPQVLAAVAYSRETPGVWFIDPRGWVGQNLFKEASIWDIPLVKPRFTCTIAADKLDSASPKTAETLQSSVDFFANGGKCANGLIAAAP 1807
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: A0A6H5JHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL7_9PHAE) HSP 1 Score: 385 bits (988), Expect = 1.760e-124 Identity = 199/255 (78.04%), Postives = 212/255 (83.14%), Query Frame = 1
Query: 1 TVMPVDVYGRRLSASDDSDPLRVAKMIGAEDVGDEL--------SVDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCGSDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPMGTNEALRESLGLRHGASLQHDGDGASMVALQELVEFD 741
TVMPVDVYGRRL+ D S PLR AK+ ED +E +VDVDRE I FFEEAA+RPYSQDLKR NLCAFV GRV EE MWEVTVK ILQFMPGMRVAIAAEAEGLD YERS+GG PGVT+S T+N ATA+LFAD YCG+ ALILYV+PGS LSR F SKDTHSPRGDLLVVHTG QGSYHDAQLR RS SVLGFDAPSFT GTDLMLP+G NE LRESLGLRHGASLQHDGDGASMVALQE+VEFD
Sbjct: 547 TVMPVDVYGRRLTPDDGSRPLREAKIFSVEDSEEEADGVEGELANVDVDREDVISFFEEAAKRPYSQDLKRRNLCAFVSGRVGEETMWEVTVKIILQFMPGMRVAIAAEAEGLDTYERSMGGRPGVTVSGTQNLATASLFADQYCGAGAALILYVKPGSDLSRFFTSKDTHSPRGDLLVVHTGFQGSYHDAQLRRRSVSVLGFDAPSFTDGTDLMLPVGANEDLRESLGLRHGASLQHDGDGASMVALQEMVEFD 801
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: A0A6H5JGJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ2_9PHAE) HSP 1 Score: 299 bits (766), Expect = 1.470e-91 Identity = 163/318 (51.26%), Postives = 203/318 (63.84%), Query Frame = 1
Query: 145 FEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCG--SDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQ-GSYHDAQLRSRSASVLGFDA------------PSFTHGTDLMLPMGTNEALRESLGLRHGASLQHDGDGASMV-ALQELVEFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEVSIWDVPLVKPRYTCAIAPAQLEP-----------GSPNTAEVLQSNLDFFSKGGKCANGLIEIMP 1017
F +AA+ P+++D+ +LCAF+ GR E W VTV SI +F PGMRVA+AAE E + YER+VG LPGVT++ST + TA+L+AD YCG + +LI+YV GS SRP SKDTHSPRGDLLV H+ S S+H A L ++ASVL PSFT GTDLMLP G N LR+ + GD A+ A+Q L + D ++AVPQ LAAL YSR+ GVWF+DPQAWV + LFKEVSIWD+PLVKPR+TCA+ PA L S A+VLQ LDFFSKGG C+NG I+ P
Sbjct: 492 FAQAAKSPFTEDVAYGSLCAFIAGRAGEVDEWAVTVSSIQKFAPGMRVAVAAEEEAVHLYERAVGPLPGVTVASTPSALTASLYADRYCGGTNSTSLIMYVTRGSTFSRPLTSKDTHSPRGDLLVAHSSSATASHHVAHLAKQTASVLALSEGGAAPPPPLPLPPSFTFGTDLMLPAGANADLRDLFASK--------GDKATFQQAVQTLADLDDLAAVPQALAALQYSRQPEGVWFLDPQAWVSEYLFKEVSIWDIPLVKPRFTCAVDPALLRNHASAGAARGGRSSFEVAQVLQDGLDFFSKGGTCSNGQIDFRP 801
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Match: D8LLE5_ECTSI (Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI) HSP 1 Score: 295 bits (755), Expect = 5.540e-91 Identity = 149/305 (48.85%), Postives = 206/305 (67.54%), Query Frame = 1
Query: 106 LSVDVDREQAIRFFEEAAERPYSQDLKRHNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAEAEGLDAYERSVGGLPGVTISSTKNPATAALFADHYCG-SDIALILYVEPGSVLSRPFASKDTHSPRGDLLVVHTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPMGTNEALRESLGLRHGASLQHDGDGASMVALQELVEFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEVSIWDVPLVKPRYTCAIAPAQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIEIMP 1017
+ DR + RFFE + RP+++D++R+ +CAFV G + EVTV S+L+F+PGMRV +AAE + +DAYER+VGGLPGV++SST++ TA+ FAD YCG ++ LI Y++ GSV+SR F SKDTHSP+GDLLVV G H L R+A+VLGF+AP FT GTDL+LP+G N LR +L AS + D A++++ + +AVPQ+LAAL Y R PG+WF +PQ WV +LF+ SIW++PLVKPR+TC + S + A++LQ NLDFF+ GG C G+I + P
Sbjct: 399 FAASADRVEVSRFFEMESVRPFAEDVERNRVCAFVAGTASQVDQIEVTVSSVLEFVPGMRVVVAAEVDAVDAYERAVGGLPGVSVSSTQSVFTASFFADEYCGVANTTLIYYLKTGSVVSRSFTSKDTHSPQGDLLVVF----GKGHSGDLADRTANVLGFEAPPFTTGTDLILPVGANADLRAAL-----ASEKTVNDAVG--AIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTNHLFQTASIWEIPLVKPRFTCELDHVSSADES-DVADILQRNLDFFAMGGTCERGVIAMQP 691 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11544.1350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11544.1350.1 >prot_Ecto-sp13_S_contig11544.1350.1 ID=prot_Ecto-sp13_S_contig11544.1350.1|Name=mRNA_Ecto-sp13_S_contig11544.1350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp MPVDVYGRRLSASDDSDPLRVAKMIGAEDVGDELSVDVDREQAIRFFEEAback to top mRNA from alignment at Ecto-sp13_S_contig11544:3919..5379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11544.1350.1 ID=mRNA_Ecto-sp13_S_contig11544.1350.1|Name=mRNA_Ecto-sp13_S_contig11544.1350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1461bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11544:3919..5379- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11544:3919..5379- >mRNA_Ecto-sp13_S_contig11544.1350.1 ID=mRNA_Ecto-sp13_S_contig11544.1350.1|Name=mRNA_Ecto-sp13_S_contig11544.1350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1014bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11544:3919..5379- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |