mRNA_Ecto-sp13_S_contig10101.134.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10101.134.1 vs. uniprot
Match: D8LHF5_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF5_ECTSI) HSP 1 Score: 960 bits (2482), Expect = 0.000e+0 Identity = 541/637 (84.93%), Postives = 560/637 (87.91%), Query Frame = 1
Query: 1 MIAYVLCRNASSPVPKDRELRSFFQNLKTSFIVAVTFFFLRGCASPTMGFIQAQQELTILTIVIPILYVALYTTVNAALQMSVGLVVVGGPVAMFVSVKLCQSSGFGGPGTFVVVFLHMFIKLLQLFGDDDFADSERDGYDEDDARGRPSVSAPGTPRVSRSPRVLPSLPPYPTIAVGADVSAAAAAVDNGNGGVDGEADGS----SDDDVSSCEAEXXXXXXXXXXXSHAAGDGVDADRGRATPSERNRRGLTPAAAPPRGRKSLDHGGDHGDTTGASEEFRLPPPTVAPHQPPLGQQAQDTEGRGXXXXXXXXXXXXXXXXSASPSFLSASARRQFNPIHASLLPSAVSGVPSTGGGGSGDDRSGGRVEQRQRQ--RPPVRSWKSERPLYRRSTSGTRGGREDNKTSDSVVRNGRDASLSALGGVEGGDGIGGASGWGEVGVGGAGGRYEPGWQYTGAKEGGGEGGDGSAEPSCKRRIRRRCLSVDDLQFLSSRKRNEEWTADWELLTGRRNTCDHKGVGSGRSAAGEGGNEQNGGPRLGRTTSSDTAKQNGTQGAADGLDSNDYDESHYLRPAWMRSGVASGVASSLAAAMETNSNAQFVFKGTMRGGCALLAILSLFLASCQIISLLQEQHEW 1893
MIAYVLCRNASS VPKDRELRSFFQNLKTSFIVAVTFFFLRGCASPTMGFIQAQQELTILTIVIPILYVALYTTVNAALQMSVGLVVVGGPVAMFVSVKLCQSSGFGGPGTFVVVFLHMFIKLLQLFGDDDFADSERDGYDEDDARGRPSVSAPGTPRVSRSP LPSLPPYPTIAV ADV+ SDDDVSSCEAE SHAAG GVDA+ GRATPSER+RRG+TPAAAPPRGRKSLDHGGD GDTT SEEFRLPPPTVAPHQPP GQQAQDTEGRGXXXXXXXXXX SASPSFLSASARRQFNPIHASLLPSAVSGVPSTGGGGSGD R+GG VEQ RPPVRSWKSERPLYRRS SGTRGGRED++TSD VR+GR+ASLSALG V+ GDG+GGA+ WG+ G GGAGGRYEPG QYTGAKEGGGEGG+GS EPSCKRRIRRRCLSVDDLQFLSSR+RNE WTADWE LTGRRNT D KGVG+GRSAAGEGGNEQNGGPRLGR+TSSDTAK+NGTQG AD LDSN+Y E HYLRPAWMRSGVASGVASSLAAAMETNSNAQFVFKGTMRGGCALLAILSLFLASCQIISLLQEQHEW
Sbjct: 1 MIAYVLCRNASSAVPKDRELRSFFQNLKTSFIVAVTFFFLRGCASPTMGFIQAQQELTILTIVIPILYVALYTTVNAALQMSVGLVVVGGPVAMFVSVKLCQSSGFGGPGTFVVVFLHMFIKLLQLFGDDDFADSERDGYDEDDARGRPSVSAPGTPRVSRSPCALPSLPPYPTIAVAADVAXXXXXXXXXXXXXXXXXXXXXXXXSDDDVSSCEAEEEGGIGGDADGSHAAGGGVDANSGRATPSERSRRGMTPAAAPPRGRKSLDHGGDDGDTTCTSEEFRLPPPTVAPHQPPFGQQAQDTEGRGXXXXXXXXXXRAS---SASPSFLSASARRQFNPIHASLLPSAVSGVPSTGGGGSGDGRTGGSVEQXXXXXXRPPVRSWKSERPLYRRSMSGTRGGREDSETSDPAVRDGRNASLSALGDVKSGDGVGGATDWGQFGGGGAGGRYEPGCQYTGAKEGGGEGGEGSTEPSCKRRIRRRCLSVDDLQFLSSRRRNEAWTADWEHLTGRRNTFDRKGVGNGRSAAGEGGNEQNGGPRLGRSTSSDTAKRNGTQGTADVLDSNNYYEPHYLRPAWMRSGVASGVASSLAAAMETNSNAQFVFKGTMRGGCALLAILSLFLASCQIISLLQEQHEW 634
BLAST of mRNA_Ecto-sp13_S_contig10101.134.1 vs. uniprot
Match: A0A6H5KV83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV83_9PHAE) HSP 1 Score: 718 bits (1854), Expect = 6.740e-254 Identity = 421/519 (81.12%), Postives = 438/519 (84.39%), Query Frame = 1
Query: 355 MFIKLLQLFGDDDFADSERDGYDEDDARGRPSVSAPGTPRVSRSPRVLPSLPPYPTIAVGADVSAAAAAVDNGNGGVDGEADGSSDDDVSSCEAEXXXXXXXXXXXSHAAGDGVDADRGRATPSERNRRGLTPAAAPPRGRKSLDHGGDHGDTTGASEEFRLPPPTVAPHQPPLGQQAQDTEGRGXXXXXXXXXXXXXXXXSASPSFLSASARRQFNPIHASLLPSAVSGVPSTGGGGSGDDRS------GGRVEQRQRQRPPVRSWKSERPLYRRSTSGTRGGREDNKTSDSVVRNGRDASLSALGGVEGGDGIGGASGWGEVGVGGAGGRYEPGWQYTGAKEGGGEGGDGSAEPSCKRRIRRRCLSVDDLQFLSSRKRNEEWTADWELLTGRRNTCDHKGVGSGRSAAGEGGNEQNGGPRLGRTTSSDTAKQNGTQGAADGLDSNDYDESHYLRPAWMRSGVASGVASSLAAAMETNSNAQFVFKGTMRGGCALLAILSLFLASCQIISLLQEQHEW 1893
MFIKLLQLFGDDDFA SERDGYDEDDARGRPSVSAPGTPRVSRSPRVLPSLPPYPTIAV A+VSA AA VDNGNGGV+GEADG SDDDVSSCEAE SHA GVDADRGR P ER+RRG+ AAAPPRGRKSLDHGG GDTT ASEEFRLPP XXXXXXXXXXXXXXXX ASPSFLSASARRQFNPIHASLLPSA SGVPSTGGG GG VEQ QRQRPPVRSWKSE PLYRRS SGTRGGREDN+TSDS VR+GR+ASLSALG VEGGDGIGGA+ WG+ G GGAGGRY+PGWQYTGA EGGGEGGDGS EPSCKRRIRRRCLSVDDLQFLSSR+RNEEWTADWE LTGRRNT DHKGVG+GRSAAGEGGNEQNGGPRLGR+TSSDTAK++ TQG AD LDSN+Y E HYLRPAWMRSGVASGVASSLAAA+ETNSNAQFVFKGTMRGGCALLAILSLFLASCQIISLLQEQHEW
Sbjct: 1 MFIKLLQLFGDDDFAASERDGYDEDDARGRPSVSAPGTPRVSRSPRVLPSLPPYPTIAVAANVSATAA-VDNGNGGVEGEADGGSDDDVSSCEAEEGGGVGGDADDSHATSGGVDADRGRVAPPERSRRGMRLAAAPPRGRKSLDHGGIDGDTTCASEEFRLPPXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPSFLSASARRQFNPIHASLLPSAASGVPSTGGGXXXXXXXXXXXXXGGSVEQWQRQRPPVRSWKSEWPLYRRSMSGTRGGREDNETSDSAVRDGRNASLSALGSVEGGDGIGGATDWGQFGGGGAGGRYQPGWQYTGANEGGGEGGDGSTEPSCKRRIRRRCLSVDDLQFLSSRRRNEEWTADWERLTGRRNTFDHKGVGNGRSAAGEGGNEQNGGPRLGRSTSSDTAKRSDTQGTADSLDSNNYYEPHYLRPAWMRSGVASGVASSLAAAIETNSNAQFVFKGTMRGGCALLAILSLFLASCQIISLLQEQHEW 515
BLAST of mRNA_Ecto-sp13_S_contig10101.134.1 vs. uniprot
Match: A0A835YVP4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP4_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.530e-21 Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 1 MIAYVLCRNASSPVPKDRELRSFFQNLKTSFIVAVTFFFLRGCASPTMGFIQAQQELTILTIVIPILYVALYTTVNAALQMS--VGLVVVGGPVAMFVSVKLCQSSGFGGPGTFVVVFLHMFIKL 369
++A +LC NASSP P +LR FQNLK SF+++ FF P+MGF+ AQ+ELT+LT+VIPI YV LY V+AA++ + VGL + A+ S+ LC S FGGPGT ++ LH+F KL
Sbjct: 286 VLALILCGNASSPSPAIFQLREVFQNLKASFVLSCCLFFTTTLLHPSMGFLDAQRELTVLTVVIPITYVVLYQVVDAAMRWTSWVGLALASIAAAVL-SIVLCSYSNFGGPGTVAIMGLHIFGKL 409
BLAST of mRNA_Ecto-sp13_S_contig10101.134.1 vs. uniprot
Match: G4Z971_PHYSP (Lipase_3 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z971_PHYSP) HSP 1 Score: 66.2 bits (160), Expect = 1.490e-7 Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 25 NASSPVPKDRELRSFFQNLKTSFIVAVTFFFLRGCASPTMGFIQAQQELTILTIVIPILYVALYTTVNAALQMSVGLVVVGGPVAM------FVSVKLCQSSGFGGPGTFVVVFLHMFIKLLQ 375
N S + L FF+ LK +F++ F R C P+MGF+ AQ ELTI+ +++P +YV + +SV V++ GP+A+ FV K+ + P FVVV L +F + L+
Sbjct: 314 NVSECDSNKKALSGFFERLKFTFVIGQGIVFFRACVHPSMGFVHAQLELTIINLLLPSIYVVSLICLRMVSLLSVRAVLIDGPLALGLAGVIFVGSKMTEK-----PHVFVVVGLFLFDRFLR 431
BLAST of mRNA_Ecto-sp13_S_contig10101.134.1 vs. uniprot
Match: A0A5D6XN61_9STRA (Lipase_3 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN61_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 5.940e-7 Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 25 NASSPVPKDRELRSFFQNLKTSFIVAVTFFFLRGCASPTMGFIQAQQELTILTIVIPILYVALYTTVNAALQMSVGLVVVGGPVAMFVSVKLCQSSG-FGGPGTFVVVFLHMFIKLLQLF 381
N ++ P ++L FF+ LK +F+ A F+R C P+MGF+ AQ ELTI+ +++P +YV + L ++ + V P+A+ V + S P F+VV L +F L+ +
Sbjct: 345 NVAACEPSQKQLAGFFERLKYTFVFAQAIVFVRACVHPSMGFVHAQLELTIINLLLPSIYVVSLIMLRLLLLLNAKSIAVTVPLALGVGGAIFYGSRKTARPHPFIVVSLFLFDIFLRWY 464 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10101.134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10101.134.1 >prot_Ecto-sp13_S_contig10101.134.1 ID=prot_Ecto-sp13_S_contig10101.134.1|Name=mRNA_Ecto-sp13_S_contig10101.134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=632bp MIAYVLCRNASSPVPKDRELRSFFQNLKTSFIVAVTFFFLRGCASPTMGFback to top mRNA from alignment at Ecto-sp13_S_contig10101:505..4462- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10101.134.1 ID=mRNA_Ecto-sp13_S_contig10101.134.1|Name=mRNA_Ecto-sp13_S_contig10101.134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3958bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10101:505..4462- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10101:505..4462- >mRNA_Ecto-sp13_S_contig10101.134.1 ID=mRNA_Ecto-sp13_S_contig10101.134.1|Name=mRNA_Ecto-sp13_S_contig10101.134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1896bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10101:505..4462- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |