prot_Ecto-sp13_S_contig11493.1307.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11493.1307.1
Unique Nameprot_Ecto-sp13_S_contig11493.1307.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length326
Homology
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: D7FYB5_ECTSI (Dihydrodipicolinate synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB5_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 2.900e-107
Identity = 163/178 (91.57%), Postives = 170/178 (95.51%), Query Frame = 0
Query:   70 VDGGEGPAAEGAATGRLALRGPVFDVLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFARKTFSGTVLNHVSASALPDVTRLISHSSSESGGGSRTVADAVLVMPPCSSFGGYAGGRETERGGDERGTEAFLRKALGGCQLPVFLYSAAGNPISPGL 247
            +DGGEG AA GAATGRLALRGPVFDVLTPFTGEGEVDFTAFGDYLQFLS+AGVPTILCNGEAGEFASLTTGERKLIV+FARKTFSGTVLNHVSASALPDVT+LISHSS +SGGGSRT+ADAVLVMPPCSSFGGY GGRETERGGDERGTEAFLRKALGGCQLPVFLYSAAG  +  GL
Sbjct:    1 MDGGEGSAAGGAATGRLALRGPVFDVLTPFTGEGEVDFTAFGDYLQFLSEAGVPTILCNGEAGEFASLTTGERKLIVDFARKTFSGTVLNHVSASALPDVTQLISHSSGKSGGGSRTLADAVLVMPPCSSFGGYPGGRETERGGDERGTEAFLRKALGGCQLPVFLYSAAGAQVGWGL 178          
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: A0A835YPJ8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.060e-29
Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 0
Query:   95 VLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFARKTFSGTVLNHVSASALPDVTRLISHSSSESG----GGSRTVADAVLVMPPCSSFGGYAGGRETERGGDERGTEAFLRKALGGCQLPVFLYSAAGNPISPGLYARLCADITTVSGILDGS 265
            +LTPFT  GE+DF +   +LQFL  AG+ +I+C   AGE+ SLT  ER+ ++ F R+ FSG ++NHVSASAL DV +LI++S   +G    GG  T ADA+L+ PP           +   G +E G EAFL +AL  C LP  + +     + P +   L  D   + G  D +
Sbjct:    1 LLTPFTDFGEIDFGSLESHLQFLEAAGISSIICGDNAGEYPSLTLEERQRLLNFCRQRFSGQIINHVSASALYDVLQLIAYSGGLAGAGGLGGHSTRADAILLQPP-----------QAFAGANEEGIEAFLHEALSSCALPSIILNGP-TAVPPRVCEALSQDFPHMLGTFDAT 163          
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: UPI0002F12EA6 (dihydrodipicolinate synthase family protein n=3 Tax=Nocardia TaxID=1817 RepID=UPI0002F12EA6)

HSP 1 Score: 110 bits (276), Expect = 1.510e-24
Identity = 76/230 (33.04%), Postives = 111/230 (48.26%), Query Frame = 0
Query:   95 VLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFARKTFSGTVLNHVSASALPDVTRLISHSSSESGGGSRTVADAVLVMPPCSSFGGYAGGRETERGGDERGTEAFLRKALGGCQLPVFLYSA---AGNPISPGLYARLCADITTVSGILDGSGDATVSWELKEALPARQLLACADRGAAEGDDPLSDCNALSVLKAGADVWVTGSSNP 321
            V+TPF   G VDF A  DYL+ L+ AGV TIL NG +GEFASLT GER+ +VE  R  ++GT++ HV A+A+ DV     H+        +   D + V+ P      +A   E+       G E F  +A+   ++P  +Y+     GNP++P + ARL  +   + G+ D   D  V+   K   P   +    DR  A             + + G D  VTG+  P
Sbjct:    8 VVTPFQVSGAVDFAALTDYLELLAGAGVGTILVNGTSGEFASLTLGERRSVVEHCRSGWAGTLIAHVGATAVADVRAAARHA--------QEYVDGLAVIAPYF----FADAPES-------GVEQFFGQAMADVEVPWLVYNFPRHTGNPVTPAMVARLAGEHPLLMGVKDSGKDLAVARAYKTTCPWLSVFVGDDRAPAR------------LGELGLDGIVTGAGGP 206          
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: UPI001FE0A176 (dihydrodipicolinate synthase family protein n=1 Tax=Nocardia amamiensis TaxID=404578 RepID=UPI001FE0A176)

HSP 1 Score: 107 bits (268), Expect = 1.400e-23
Identity = 73/220 (33.18%), Postives = 106/220 (48.18%), Query Frame = 0
Query:  105 VDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFARKTFSGTVLNHVSASALPDVTRLISHSSSESGGGSRTVADAVLVMPPCSSFGGYAGGRETERGGDERGTEAFLRKALGGCQLPVFLYSA---AGNPISPGLYARLCADITTVSGILDGSGDATVSWELKEALPARQLLACADRGAAEGDDPLSDCNALSVLKAGADVWVTGSSNP 321
            +DF AF DYL+ L+ AGV TIL NG +GEFASLT GER+ +VE  R  ++GT++ HV A+A+ DV     H+        +  AD + V+ P   F   A          E G E F  +A+   ++P  +Y+     GNP+SP + ARL  +   + G+ D   D  ++   K   P   +    DR  A             + + G D  VTG+  P
Sbjct:    1 MDFAAFTDYLELLAGAGVGTILVNGTSGEFASLTAGERRSVVEHCRNGWAGTLIAHVGATAVADVRAAARHA--------QEFADGLAVIAP--DFFADA---------PESGVEQFFGQAMADVEVPWLVYNFPRHTGNPVSPAVVARLAGEYPLLMGVKDSGKDLAIAQVYKSGCPRLSVFVGDDRAPAR------------LGELGLDGVVTGAGGP 189          
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: K0F0F0_9NOCA (Dihydrodipicolinate synthase n=2 Tax=Nocardia brasiliensis TaxID=37326 RepID=K0F0F0_9NOCA)

HSP 1 Score: 106 bits (265), Expect = 4.440e-23
Identity = 81/237 (34.18%), Postives = 108/237 (45.57%), Query Frame = 0
Query:   88 LRGPVFDVLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFARKTFSGTVLNHVSASALPDVTRLISHSSSESGGGSRTVADAVLVMPPCSSFGGYAGGRETERGGDERGTEAFLRKALGGCQLPVFLYSA---AGNPISPGLYARLCADITTVSGILDGSGDATVSWELKEALPARQLLACADRGAAEGDDPLSDCNALSVLKAGADVWVTGSSNP 321
            +  P+  V TPF  +G +D  A GDYL  L+ AG+ TIL NG   EFASLT+ ER+ IVE+AR  ++G ++ HV + A+ +   L  H++           D +  + P   F   A          E G E +  + L     PV LY+      NP+SP L ARL      V GI D   D  V+ E K   P   + A  DR  A           LS L  G D  VTG+  P
Sbjct:    2 ITSPIVAVTTPFQLDGRIDLPALGDYLDLLAAAGIRTILVNGTTAEFASLTSAERRRIVEYARGRWAGELIAHVGSPAIAEAEELADHAAQH--------CDRLAAISPY--FFADA---------PEAGVEHYFAQLLEATTHPVLLYNFPRHTQNPLSPALVARLAGRYPHVCGIKDSGMDLAVTREFKTRSPRLAVFAGNDRVGA----------GLSEL--GIDGVVTGAGGP 207          
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: A0A450SP52_9GAMM (4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Candidatus Kentron sp. FW TaxID=2126338 RepID=A0A450SP52_9GAMM)

HSP 1 Score: 90.5 bits (223), Expect = 3.710e-17
Identity = 70/240 (29.17%), Postives = 103/240 (42.92%), Query Frame = 0
Query:   85 RLALRGPVFDVLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFARKTFSGTVLNHVSASALPDVTRLISHSSSESGGGSRTVADAVLVMPPCSSFGGYAGGRETERGGDERGTEAFLRKALGGCQLPVFLYSA---AGNPISPGLYARLCADITTVSGILDGSGDATVSWELKEALPARQLLACADRGAAEGDDPLSDCNALSVLKAGADVWVTGSSNP 321
             + + GP+F  +TPF  +   D  AF +YL FL KAGV +IL NG  GEF SLT  ER    E A+K F+G V++ +S+    +   L   S           ADA+L++PP      Y   R       E G   F + AL G Q P ++Y+        +S      +      + G+ D   D  +S    E +    +                D  AL+VL+ G    ++G+ NP
Sbjct:    4 NMNINGPIFATVTPFNQDDNFDEMAFINYLAFLEKAGVKSILVNGTTGEFPSLTFEERVETCEIAKKNFNGNVISDISSCCYREANELARSS---------VDADALLLLPPY-----YYDVRS------EGGLVGFFKNALKGIQTPTYIYNFPFYTKVSLSKQDVVEIHKACANIVGLKDSGKDLGLSKSFSENIDNFDVFVA------------GDMVALNVLEIGLKGSISGAGNP 211          
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: UPI001892E6B3 (dihydrodipicolinate synthase family protein n=1 Tax=Nocardia abscessus TaxID=120957 RepID=UPI001892E6B3)

HSP 1 Score: 82.0 bits (201), Expect = 8.980e-16
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 0
Query:   92 VFDVLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFARKTFSGTVLNHVSASALPDVTRLISHSSSESGGGSRTVAD 189
            V  VL PF   G +DF A  DYL+ L+ AGV TIL NG +GEFA LT GER+ +VE  R  ++GTV+ H  A+ + DV     H+   +  G R VA+
Sbjct:    6 VVAVLAPFQRSGRIDFAALTDYLELLASAGVGTILVNGTSGEFAGLTAGERRSVVEHCRGEWAGTVIAHAGAAVVEDVRAAARHAQEHADAG-RPVAN 102          
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: A0A7C1DNL0_9BACT (PRK domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C1DNL0_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 1.140e-15
Identity = 60/163 (36.81%), Postives = 85/163 (52.15%), Query Frame = 0
Query:   88 LRGPVFDVLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFARKTFSGTVLNHVSASALPDVTRLISHSSSESGGGSRTVADAVLVMPPCSSFGGYAGGRETERGGDERGTEAFLRKALGGCQLPVFLYSA---AGNPISPGL 247
            + G +  VLTPF   GE+D   F ++L+FL+KAGV  +L NG  GEF SL +GER+L++  AR  F G +L      +L   T+     + E G      AD VLV+PP      +AG  E+       G   +  +A     LPV LY+     GNP++PG+
Sbjct:  244 ISGLILPVLTPFNASGEIDQKYFIEHLEFLAKAGVGRVLVNGTTGEFFSLDSGERRLLLRLARTYFPGVILFQAGTESLIR-TKAEIRWAEEDG------ADGVLVLPPYY----FAGAPES-------GLVRYFEEAAACSSLPVILYNFPKHTGNPLTPGI 388          
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: UPI0005B82211 (dihydrodipicolinate synthase family protein n=1 Tax=Nocardia abscessus TaxID=120957 RepID=UPI0005B82211)

HSP 1 Score: 67.4 bits (163), Expect = 7.920e-11
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   95 VLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVE 147
            V+TPF   G VDF A  DYL  L+ AGV TIL NG  GEFASLT+GER+ ++E
Sbjct:    9 VVTPFRASGAVDFGALSDYLGLLAAAGVDTILVNGTTGEFASLTSGERRAVIE 61          
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Match: A0A7C3SPN2_9ARCH (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C3SPN2_9ARCH)

HSP 1 Score: 63.9 bits (154), Expect = 6.040e-8
Identity = 62/244 (25.41%), Postives = 105/244 (43.03%), Query Frame = 0
Query:   88 LRGPVFDVLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFARKTFSGTV-----LNHVSASALPDVTRLISHSSSESGGGSRTVADAVLVMPPCSSFGGYAGGRETERGGDERGTEAFLRKALGGCQLPVFLYSAAGNP------ISPGLYARLCADITTVSGILDGSGDATVSWELKEALPARQLLACADRGAAEGDDPLSDCNALSVLKAGADVWVTGSSN 320
            L+G +  ++TPF    EV+ +A  + + +  + G+  IL  G  GEFA+L++ ERK + +       G V      +  S  A  ++T+      +E+ G     ADAVLV+PP      Y   +E E            +      +LP+ +Y+   NP      I P L A+L A+   +  + + SGD T  W+++        + C            S+  AL     GA  W++ ++N
Sbjct:    6 LKGVIVAMVTPFDEHEEVNLSALKEIVDYFIEQGIHGILVCGSTGEFAALSSSERKKMFDIVINHVDGRVPVVCGTSTCSTKATIELTKY-----AENAG-----ADAVLVVPPF-----YIKPKENE-------VYEHYKLIAESTKLPIIIYN---NPWTSKVDIPPHLIAKL-AEFNNIKYVKESSGDITRIWKIRSLTNDGITVFCG-----------SENQALESFVMGAKGWISAAAN 212          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11493.1307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYB5_ECTSI2.900e-10791.57Dihydrodipicolinate synthetase n=1 Tax=Ectocarpus ... [more]
A0A835YPJ8_9STRA3.060e-2940.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
UPI0002F12EA61.510e-2433.04dihydrodipicolinate synthase family protein n=3 Ta... [more]
UPI001FE0A1761.400e-2333.18dihydrodipicolinate synthase family protein n=1 Ta... [more]
K0F0F0_9NOCA4.440e-2334.18Dihydrodipicolinate synthase n=2 Tax=Nocardia bras... [more]
A0A450SP52_9GAMM3.710e-1729.174-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=... [more]
UPI001892E6B38.980e-1645.92dihydrodipicolinate synthase family protein n=1 Ta... [more]
A0A7C1DNL0_9BACT1.140e-1536.81PRK domain-containing protein n=1 Tax=bacterium Ta... [more]
UPI0005B822117.920e-1160.38dihydrodipicolinate synthase family protein n=1 Ta... [more]
A0A7C3SPN2_9ARCH6.040e-825.414-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002220DapA-likeSMARTSM01130DHDPS_2coord: 87..325
e-value: 1.1E-5
score: -39.6
IPR002220DapA-likePFAMPF00701DHDPScoord: 94..165
e-value: 2.2E-7
score: 29.9
IPR002220DapA-likePANTHERPTHR12128DIHYDRODIPICOLINATE SYNTHASEcoord: 87..272
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 80..324
e-value: 2.6E-28
score: 100.7
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 88..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11493contigEcto-sp13_S_contig11493:917..5189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11493.1307.1mRNA_Ecto-sp13_S_contig11493.1307.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11493 917..5189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11493.1307.1 ID=prot_Ecto-sp13_S_contig11493.1307.1|Name=mRNA_Ecto-sp13_S_contig11493.1307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=326bp
HALTDFPGPPASAATSTTAFAAFSLGGSSLRRPSPAQYRRGGGYINPPPP
HPTNRRRPRPYETAFAVVGVDGGEGPAAEGAATGRLALRGPVFDVLTPFT
GEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTGERKLIVEFAR
KTFSGTVLNHVSASALPDVTRLISHSSSESGGGSRTVADAVLVMPPCSSF
GGYAGGRETERGGDERGTEAFLRKALGGCQLPVFLYSAAGNPISPGLYAR
LCADITTVSGILDGSGDATVSWELKEALPARQLLACADRGAAEGDDPLSD
CNALSVLKAGADVWVTGSSNPRECS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002220DapA-like
IPR013785Aldolase_TIM