prot_Ecto-sp13_S_contig1140.1228.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1140.1228.1
Unique Nameprot_Ecto-sp13_S_contig1140.1228.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length134
Homology
BLAST of mRNA_Ecto-sp13_S_contig1140.1228.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 3.490e-19
Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    3 YSCVRGTNDVKAQKGYRRYLRTLLTRYCASWALARSVLQKFNVRGNLRMIVKNRGSPVALRGHCIEYHVELIQRATD 79
            Y CVRGTNDV+   GY RYLRTLL  YCAS ALA+SVL +FN R NL+M+VKNRG P  L  H  ++ VE+IQRAT+
Sbjct:  694 YRCVRGTNDVE---GYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEIIQRATE 767          
BLAST of mRNA_Ecto-sp13_S_contig1140.1228.1 vs. uniprot
Match: A0A6H5K9U3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U3_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 4.270e-16
Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 0
Query:    3 YSCVRGTNDVKAQKGYRRYLRTLLTRYCASWALARSVLQKFNVRGNLRMIVKNRGSPVALRGHCIEYHVELIQRATDGLAPELPNPR-PEWPAAID 97
            + CVRGTN     +GY RYLR LL+ YCAS ALA SVL +FN R N+RM VKNRG P  +     +Y  E+IQR T    P+  NP  PEW +A+D
Sbjct:   57 HRCVRGTN---CTEGYHRYLRRLLSSYCASPALAHSVLLEFNFRWNVRMAVKNRGLPREVGEFFDQYETEIIQRDTASWYPD--NPLFPEWVSALD 147          
BLAST of mRNA_Ecto-sp13_S_contig1140.1228.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 8.030e-16
Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0
Query:    5 CVRGTNDVKAQKGYRRYLRTLLTRYCASWALARSVLQKFNVRGNLRMIVKNRGSPVALRGHCIEYHVELIQRATDGLAPELPNPRPEWPAAIDSV 99
            CVRGTN     +GY RYLR LL+ YCAS +LA SVL +FN R N+RM VKNRG P  +     ++ +E+IQR T    P+ P   PEW +A+D+ 
Sbjct:  329 CVRGTN---CTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPL-FPEWVSALDAA 419          
BLAST of mRNA_Ecto-sp13_S_contig1140.1228.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.920e-15
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 0
Query:    5 CVRGTNDVKAQKGYRRYLRTLLTRYCASWALARSVLQKFNVRGNLRMIVKNRGSPVALRGHCIEYHVELIQRATDGLAPELPNPRPEWPAAIDSV 99
            CVRGTN     +GY RY+R LL+ YCAS +LA SVL +FN R N+RM VKNRG P  +     ++ +E+IQR T    P+ P   PEW +A+D+ 
Sbjct:  332 CVRGTN---CTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPL-FPEWVSALDAA 422          
BLAST of mRNA_Ecto-sp13_S_contig1140.1228.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 9.960e-9
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 0
Query:    5 CVRGTNDVKAQKGYRRYLRTLLTRYCASWALARSVLQKFNVRGNLRMIVKNRGSPVALRGHCIE-YHVELIQRATDGLAPELP 86
            CVRGTN  +   GY R L  LL+ YCAS ALA S+L +F  R N++M VKN    +   G C + + +E+IQR T    P+ P
Sbjct:  351 CVRGTNSTE---GYHRLLLRLLSTYCASPALAHSILLEFKHRWNIKMAVKNLSKEI---GGCFDQFDIEIIQRETTSWDPDCP 427          
BLAST of mRNA_Ecto-sp13_S_contig1140.1228.1 vs. uniprot
Match: A0A6H5KP32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP32_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 7.100e-6
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   25 LLTRYCASWALARSVLQKFNVRGNLRMIVKNRGSPVALRGHCIEYHVELIQRAT 78
            LL+ YCAS ALA S+L +FN R N++M VKNR  P  + G   ++ +E+IQR T
Sbjct:   84 LLSTYCASPALAHSILLEFNHRWNIKMAVKNRNLPKEIGGCFDQFDIEIIQRET 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1140.1228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G3Q9_ECTSI3.490e-1963.643'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K9U3_9PHAE4.270e-1652.08Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLP1_9PHAE8.030e-1649.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPK9_9PHAE1.920e-1548.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSM2_9PHAE9.960e-944.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP32_9PHAE7.100e-650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1140contigEcto-sp13_S_contig1140:15202..16303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1140.1228.1mRNA_Ecto-sp13_S_contig1140.1228.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1140 15089..16560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1140.1228.1 ID=prot_Ecto-sp13_S_contig1140.1228.1|Name=mRNA_Ecto-sp13_S_contig1140.1228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=134bp
MAYSCVRGTNDVKAQKGYRRYLRTLLTRYCASWALARSVLQKFNVRGNLR
MIVKNRGSPVALRGHCIEYHVELIQRATDGLAPELPNPRPEWPAAIDSVA
QWARARRVGSPGAYRRKRPTGGREFPRRRGVAC*
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