mRNA_Ecto-sp13_S_contig11255.1116.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11255.1116.1
Unique NamemRNA_Ecto-sp13_S_contig11255.1116.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: A0A6H5KSK2_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSK2_9PHAE)

HSP 1 Score: 594 bits (1531), Expect = 2.280e-211
Identity = 279/282 (98.94%), Postives = 281/282 (99.65%), Query Frame = 1
Query:    1 ASDDFTAYCLILPLLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDVTEQPQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKTYLAMRETARQAWTKPNFKFTDSMLYEGASLVG 846
            ASDDFTAYCLILPLLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKR+HELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDVTEQPQYRND+EGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKTYLAMRET RQAWTKPNFKFTDSMLYEGASLVG
Sbjct:  232 ASDDFTAYCLILPLLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRVHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDVTEQPQYRNDKEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKTYLAMRETGRQAWTKPNFKFTDSMLYEGASLVG 513          
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: A0A388KCP8_CHABU (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KCP8_CHABU)

HSP 1 Score: 247 bits (631), Expect = 7.080e-76
Identity = 121/271 (44.65%), Postives = 170/271 (62.73%), Query Frame = 1
Query:   40 LLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDVTEQPQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKTYLAMRETARQA--WTKPNFKFTDSMLYEGASLVG 846
            L GIG  WW  +HNIHH+VCN    DPDIQH+P  A+S K F +LYS +H + M +D + R LVS QH  +YP+M V+R  LY+Q+ + ++   +    + E+L    F+ W   L S L  +  +A +FL+SHA  GILHVQI +SHF M   E    R D+  +VV QL  TLD+DC  W+DWFHGGLQ+Q +HHLFP+LPR+NLR V++ +    ++H L YH + FL ANI     +++ A +A  +TKP  +   +ML+E  +  G
Sbjct:  192 LTGIGIGWWKSTHNIHHIVCNSRDYDPDIQHMPVFAVSSKMFNNLYSHFHKRRMNFDSVARFLVSYQHFTYYPIMAVARVNLYLQTWIHIIKGEKNFLWVMEILGVAAFWTWYLSLLSFLPSSGEKAMFFLISHAAGGILHVQICVSHFPMPTFEG---RPDDVSFVVNQLRGTLDIDCPTWLDWFHGGLQYQVIHHLFPRLPRHNLRKVRAIIEQFCKRHDLKYHSFTFLDANIALLKCLKKAALEARDYTKPAPELKQTMLWEALNAQG 459          
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: A0A6P8H3R0_ACTTE (delta(8)-fatty-acid desaturase-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H3R0_ACTTE)

HSP 1 Score: 244 bits (623), Expect = 9.760e-75
Identity = 121/282 (42.91%), Postives = 180/282 (63.83%), Query Frame = 1
Query:    7 DDFTAYCLILPLLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWP-RASYFLVSHAVSGILHVQITLSHFSMDVTEQ-PQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKTYLAMRETARQAWTKPNFKFTDSMLYEGASLVG 846
            DD+    +   + G+   WW  SHN HH+V N +  DPDIQHLP +AIS KFF S+YS YH+++M +D + +  V  QH L++ +M ++R  LY+QS +  L+K + K R  ELL+  +F+ W  YLCSHL   WP R  + L++H ++GI+H+QITLSHFSM+     PQ     + ++++Q+NTT+D++C    D+FHGGLQFQ  HHLFP++ R  LR +Q ++ AL +KHGL Y    F+ ANI+    ++ETA+++      K    ML+EG   +G
Sbjct:  180 DDWIGLFVGNLMTGVSIGWWQRSHNAHHIVTNSIEFDPDIQHLPVLAISDKFFKSIYSYYHERVMAFDGIAKIFVRYQHYLYFLIMGLARFNLYLQSFLLALSKEKVKYRFLELLTMCLFWSWYLYLCSHLP-TWPTRIVFILLAHFLAGIIHIQITLSHFSMETHHGIPQEAFQTDKFLLSQMNTTMDIECDPXFDFFHGGLQFQFEHHLFPRVAREKLRGIQMQMKALCKKHGLPYQSKSFIDANIEVINCLKETAQKS------KCISPMLWEGIHAIG 454          
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: A0A096P9X6_OSTTA (Cytochrome b5-like heme/steroid binding domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P9X6_OSTTA)

HSP 1 Score: 244 bits (624), Expect = 2.570e-74
Identity = 116/253 (45.85%), Postives = 165/253 (65.22%), Query Frame = 1
Query:   46 GIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDVTEQPQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAA-LAEKHGLTYHLYPFLQANIKTYLAMRETARQAWTKPNF 801
            G+G  WW+ +HN+HH  CN + CDPDIQH+P +A+S K+F S+YS+YH + M YD + R LV  QHL FYP+M V+R  LY+Q+++F+    R + R  E L+  +F  W + L + L     R  +F +SHAV+GI+HVQI LSHFS DV E    R + + WV  QL+ T+D++C RW+DWFHGGLQFQ  HHL P++PR+ LR  +  V    AEK+GL  H   F  AN++ +  ++  A+Q+   P+F
Sbjct:  251 GVGIAWWMATHNVHHCACNSLECDPDIQHMPVLAVSEKYFKSVYSLYHRRRMTYDRVARLLVRYQHLTFYPIMAVARINLYLQTLIFLFKAKRVRNRGMEFLTLGMFAAWLSALIAQLPSG-HRVPFFFLSHAVAGIIHVQICLSHFSRDVFEG---RPENDEWVKMQLSGTMDIECPRWLDWFHGGLQFQVEHHLCPRVPRHKLREFRETVVKPFAEKNGLQLHSVGFWAANLEVFRTLKLAAKQSRWAPHF 499          
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: A4RWB4_OSTLU (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RWB4_OSTLU)

HSP 1 Score: 241 bits (615), Expect = 4.740e-73
Identity = 117/267 (43.82%), Postives = 165/267 (61.80%), Query Frame = 1
Query:    4 SDDFTAYCLILPLLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDVTEQPQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAA-LAEKHGLTYHLYPFLQANIKTYLAMRETARQAWTKPNF 801
             D    +C+     G+G  WW+ +HN+HH  CN + CDPDIQH+P  A+S K+F S+YS+YH + M YD L R LV  QH  FYP+M V+R  LY+Q+++F++   R + R  E L+  +F  W   L + L     +  +F +SHAV+G++HVQI LSHFS DV E    R + + WV  QL  TLD+DC RW+DWFHGGLQFQT HHL P++PR+ LR  +  V    A+ +GL  H   F  AN + +  ++  A+Q+   P+F
Sbjct:  230 KDAMIGWCVGNLFNGVGIAWWMATHNVHHCACNSLECDPDIQHMPVFAVSNKYFGSVYSLYHRRRMTYDRLARTLVRFQHYTFYPIMAVARINLYLQTLIFLIKAKRVRSRAMEFLTLGVFATWLTTLIAQLPVG-HKVPFFFLSHAVAGVIHVQICLSHFSRDVFEG---RPENDEWVNMQLAGTLDIDCPRWLDWFHGGLQFQTEHHLCPRVPRHKLRAFREDVVKPYAKANGLGLHSVSFWAANAEVFRTLKLAAKQSRWAPHF 492          
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: UPI00109BD13D (delta(8)-fatty-acid desaturase n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BD13D)

HSP 1 Score: 241 bits (616), Expect = 5.370e-73
Identity = 114/272 (41.91%), Postives = 181/272 (66.54%), Query Frame = 1
Query:   40 LLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDV---TEQPQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKTYLAMRETARQAWTKPNFKFTDSMLYEGASLVG 846
            L G+   WW  SHN HH+V N +  DPDIQHLP +AIS K+F S+YS YH ++M YD L +  V+ QH L++ +M ++R  LY+QS +  L+K + K R  ELL+  +F+ W  YLCS+L     R ++  ++H ++GI+H+QITLSHFSM+      Q  ++ND+  ++++Q++TT+D++C  WMD+FHGGLQFQ  HH+FP++ R+NLR + + + AL +KHGL +    F++AN++    ++ET+ ++      +    ML+EG + +G
Sbjct:  254 LTGVSIGWWQKSHNAHHIVTNSIEFDPDIQHLPVLAISEKYFKSIYSFYHQRVMQYDKLAKFFVTYQHHLYFLVMGLARFNLYLQSFLLALSKEKVKMRFLELLTMFLFWTWYLYLCSYLPTWTTRLAFVFLAHFLAGIIHIQITLSHFSMETHXGIPQESFKNDK--FLLSQMDTTMDIECNPWMDFFHGGLQFQFEHHMFPRVARHNLRGIHNEMKALCKKHGLPFRSKSFIEANMEVIGKLKETSIKS------ESFSHMLWEGINAIG 517          
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: C1N6E7_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N6E7_MICPC)

HSP 1 Score: 241 bits (616), Expect = 6.830e-73
Identity = 117/255 (45.88%), Postives = 161/255 (63.14%), Query Frame = 1
Query:   46 GIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARA--KKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDVTEQPQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSR-VAALAEKHGLTYHLYPFLQANIKTYLAMRETARQAWTKPNF 801
            G+G  WW  +HN+HHV CN + CDPDIQH+P +A++PK+F S++S+YH++ M +D   R LVS QH  FYP+M V+R  LY QSI+ +L       K+R  EL     +F W A L S +   W R  + L+SHAV G++HVQI LSHFS ++ E    R +   WV  QL+ T+D+DC R+MDWFHGGLQFQT HHL P++PR+ LR  +   +    + HGLT     F +AN + +  +R  AR+A   P F
Sbjct:  268 GVGITWWTTTHNVHHVACNSLECDPDIQHMPIIAVTPKYFKSVWSLYHNRRMPFDAAARWLVSKQHYTFYPIMAVARFNLYAQSIILLLTSKEITLKRRTLELAVMGAYFAWLAALVSAVPSGWERLGFLLLSHAVGGVIHVQICLSHFSRNIFEG---RPENGKWVEMQLSGTMDIDCPRYMDWFHGGLQFQTEHHLVPRMPRHKLRRFREETLRPWLKAHGLTMDAPTFWEANREVWCTLRNCAREARLSPAF 519          
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: A0A7D9JH96_PARCT (Delta(8)-fatty-acid desaturase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JH96_PARCT)

HSP 1 Score: 238 bits (608), Expect = 1.750e-72
Identity = 121/282 (42.91%), Postives = 177/282 (62.77%), Query Frame = 1
Query:    4 SDDFTAYCLILPLLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDVTEQ-PQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKTYLAMRETARQAWTKPNFKFTDSMLYEGASLVG 846
            +D+   + +   L GIG  WW  SHN HHVV N V+CDPDIQHLP  A++ KFF  + S YH+K   +D + +  VS QHLL+Y +M V+R  LYVQSI+ VL     +K+  EL++  IF+CW + LCS +     R  + L+SH V+G+LHVQIT+SHFSM      P +    + + V+Q+ TT++VDC+ +MD+FHGGLQFQ  HHLFP++ R  LR + +++  L +KH + Y    F  AN +   ++RETA++A      +   S +++G + VG
Sbjct:  180 TDEIIGFLVGNTLSGIGIGWWKRSHNAHHVVTNSVNCDPDIQHLPVFAVTDKFFKPVISTYHNKTFSFDRISKFFVSNQHLLYYAIMGVARFNLYVQSIIHVLTHCTGRKQKLELITLGIFWCWFSLLCSLIPTLSGRVVFVLLSHFVAGLLHVQITISHFSMATYHGLPSHTYQRDSFFVSQMETTMNVDCHPYMDFFHGGLQFQIEHHLFPRVSRPYLRALSAKIQKLCQKHDVRYLSLSFYDANKEVLGSLRETAKKA------QCFSSFIWDGINAVG 455          
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: UPI00077AD8EF (delta(8)-fatty-acid desaturase 2-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AD8EF)

HSP 1 Score: 232 bits (592), Expect = 5.550e-72
Identity = 117/269 (43.49%), Postives = 165/269 (61.34%), Query Frame = 1
Query:   46 GIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFL-VSHAVSGILHVQITLSHFSMDVTE-QPQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKTYLAMRETARQAWTKPNFKFTDSMLYEGASLVG 846
            G+   WW  SHN HH+V N V  DPDIQHLP  A++ KFF S+ S+YH++I+ +D + R  VS QH L+Y +M ++R  LYVQS + V +    + +  EL   + F+ W  YLCS L   W     F+ V+H ++GILHVQITLSHFSMD     P       G+ + QL TT+D++C  W+D+FHGGLQFQ  HHLFP+LPR+ LR  +S+V  L  KH + Y    F +AN++    ++ETA +A      K    +++EG + +G
Sbjct:   40 GVSIGWWKKSHNAHHIVTNSVEFDPDIQHLPVFAVTEKFFKSVKSMYHERILYFDQVARFFVSNQHWLYYIVMGLARFNLYVQSFLLVFSLPSGRNKYFELFGLIFFWTWYIYLCSFLP-TWSSLFIFVFVAHFLAGILHVQITLSHFSMDTYHGHPNEVFKGSGYALLQLQTTMDIECNPWLDFFHGGLQFQIEHHLFPRLPRHRLRETKSKVQELCRKHNVPYRSKTFYEANLEVIQRLKETATKA------KCLSPIIWEGVNAIG 301          
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Match: A0A7S2TJF5_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJF5_9EUKA)

HSP 1 Score: 236 bits (603), Expect = 8.160e-72
Identity = 119/274 (43.43%), Postives = 166/274 (60.58%), Query Frame = 1
Query:    7 DDFTAYCLILPLLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAISPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSIVFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVSGILHVQITLSHFSMDVTEQPQYRNDEEGWVVTQLNTTLDVDCYRWMDWFHGGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKTYLAMRETARQAWTKPNFKFTDSMLYE 828
            D F A  L+  L GI   WW  SHN HH+V N V  D DIQHLPF  +  ++F S++S +H +IM +D     +V  Q +LFYP+M V+R +LY+QS+V++     +++R  E+ S+ +F+ W   L   L      A+YF +SHAV+GILHVQI +SHF M      +  ND E +  TQL T+LDV C  +MDWFHGGLQFQ  HHLFP +PR+NLR VQ  +    E+ G  +H   F +AN      + E +++    PN +FTD+ LY+
Sbjct:  173 DYFIAQMLV-SLFGISSSWWKASHNNHHIVTNAVEHDADIQHLPFFVVDSEYFKSIWSTWHKRIMDFDDFSNLMVRNQAVLFYPIMMVARVYLYIQSVVYLATGRISERRGFEIASFSLFYVWFPALICQLPTWGTMAAYFFISHAVAGILHVQICISHFPMPTYMNMEMENDSEAFFKTQLVTSLDVTCPWYMDWFHGGLQFQVEHHLFPHIPRHNLRKVQPIIKEFCEEMGWKHHSVSFFEANRMVVNHLYEVSKKT---PNMRFTDTKLYD 442          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11255.1116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSK2_9PHAE2.280e-21198.94Cytochrome b5 heme-binding domain-containing prote... [more]
A0A388KCP8_CHABU7.080e-7644.65Cytochrome b5 heme-binding domain-containing prote... [more]
A0A6P8H3R0_ACTTE9.760e-7542.91delta(8)-fatty-acid desaturase-like n=1 Tax=Actini... [more]
A0A096P9X6_OSTTA2.570e-7445.85Cytochrome b5-like heme/steroid binding domain n=2... [more]
A4RWB4_OSTLU4.740e-7343.82Cytochrome b5 heme-binding domain-containing prote... [more]
UPI00109BD13D5.370e-7341.91delta(8)-fatty-acid desaturase n=2 Tax=Exaiptasia ... [more]
C1N6E7_MICPC6.830e-7345.88Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7D9JH96_PARCT1.750e-7242.91Delta(8)-fatty-acid desaturase n=2 Tax=Paramuricea... [more]
UPI00077AD8EF5.550e-7243.49delta(8)-fatty-acid desaturase 2-like n=1 Tax=Acro... [more]
A0A7S2TJF5_9EUKA8.160e-7243.43Hypothetical protein n=2 Tax=Lotharella oceanica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11255contigEcto-sp13_S_contig11255:344..4578 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score594.0
Seed ortholog evalue3.8e-167
Seed eggNOG ortholog2880.D8LHU7
Preferred nameSLD
Model size849
KEGG koko:K13076,ko:K21734,ko:K21737
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006677,GO:0006678,GO:0006679,GO:0006687,GO:0006688,GO:0006807,GO:0007009,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009405,GO:0009987,GO:0010256,GO:0016043,GO:0016491,GO:0016705,GO:0030148,GO:0034641,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044419,GO:0046467,GO:0046476,GO:0046513,GO:0051704,GO:0055114,GO:0061024,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
Exons7
EggNOG free text desc.unsaturated fatty acid biosynthetic process
EggNOG OGsCOG3239@1,KOG4232@2759
Ec32 ortholog descriptionFatty acid desaturase
Ec32 orthologEc-18_000530.1
EC1.14.19.18,1.14.19.29,1.14.19.38,1.14.19.47
Cds size849
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11255.1116.1prot_Ecto-sp13_S_contig11255.1116.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11255 344..4578 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462588.1319144-CDS-Ecto-sp13_S_contig11255:343..4581681462588.1319144-CDS-Ecto-sp13_S_contig11255:343..458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11255 344..458 +
1681462588.1494057-CDS-Ecto-sp13_S_contig11255:867..10151681462588.1494057-CDS-Ecto-sp13_S_contig11255:867..1015Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11255 868..1015 +
1681462588.1589239-CDS-Ecto-sp13_S_contig11255:1686..18251681462588.1589239-CDS-Ecto-sp13_S_contig11255:1686..1825Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11255 1687..1825 +
1681462588.1681852-CDS-Ecto-sp13_S_contig11255:2431..25471681462588.1681852-CDS-Ecto-sp13_S_contig11255:2431..2547Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11255 2432..2547 +
1681462588.1812162-CDS-Ecto-sp13_S_contig11255:3194..32941681462588.1812162-CDS-Ecto-sp13_S_contig11255:3194..3294Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11255 3195..3294 +
1681462588.1902666-CDS-Ecto-sp13_S_contig11255:4142..43041681462588.1902666-CDS-Ecto-sp13_S_contig11255:4142..4304Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11255 4143..4304 +
1681462588.1988819-CDS-Ecto-sp13_S_contig11255:4509..45781681462588.1988819-CDS-Ecto-sp13_S_contig11255:4509..4578Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11255 4510..4578 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11255.1116.1

>prot_Ecto-sp13_S_contig11255.1116.1 ID=prot_Ecto-sp13_S_contig11255.1116.1|Name=mRNA_Ecto-sp13_S_contig11255.1116.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp
ASDDFTAYCLILPLLGIGPQWWIDSHNIHHVVCNDVHCDPDIQHLPFMAI
SPKFFASLYSVYHDKIMVYDFLGRCLVSVQHLLFYPLMCVSRTFLYVQSI
VFVLAKARAKKRLHELLSYVIFFCWNAYLCSHLQGAWPRASYFLVSHAVS
GILHVQITLSHFSMDVTEQPQYRNDEEGWVVTQLNTTLDVDCYRWMDWFH
GGLQFQTLHHLFPKLPRYNLRTVQSRVAALAEKHGLTYHLYPFLQANIKT
YLAMRETARQAWTKPNFKFTDSMLYEGASLVG*
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mRNA from alignment at Ecto-sp13_S_contig11255:344..4578+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11255.1116.1 ID=mRNA_Ecto-sp13_S_contig11255.1116.1|Name=mRNA_Ecto-sp13_S_contig11255.1116.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4235bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11255:344..4578+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCCTCGGACGACTTCACGGCGTACTGCCTTATCCTTCCCCTTCTCGGGAT TGGTCCGCAATGGTGGATTGACTCTCACAACATCCACCACGTCGTGTGCA ACGATGTACACTGCGGTGAGCTGGTGTCTATCCCTGAACCGGCGAAACGT AGAGTGTGGTACCGTCGGATACCCCACGGCAGTAGTCTGTGTTGCCTGCC TTTTTACTTTACCCCGAATTGGTCCGGACACCCCGGTCCTACCGCCGTAC GTGGCGGGTTCGCTCCCGTGTGAGCCTGACACATCCGGCTTATCGCACTG ATGATTAAAGGGAATCGAGAATACTCGTATCGTTCAAATCCTCCTGTCGG GTTTTGGCGTTATGTTGAACATGGACCGAACAGAACTGCCTGTGTGTGTT TGTGTTTTCGTCCCATGTATCATGGCGGCTTTTGCGTAGCAAAGAACTTT GATTGAGATGCAAAAACAATACAGAACATGTTCTTCGAACCATCGACGAA ACCTTTTCTATTGCTCGTCGCTAGACCCGGACATCCAGCATCTCCCGTTC ATGGCGATTTCGCCCAAGTTCTTCGCCTCGTTGTACTCGGTGTACCACGA CAAGATCATGGTCTACGACTTCCTTGGTCGGTGCCTTGTGTCCGTGCAGC ATCTTCTTTTCTACCCCCTCATGTGAGCAGCATGCGGGACGCTGCCGCCC TCCGATCGGTGTACCCACCTTGTGCCGTATCGTCAGAGATGAGAAGGTCA TGGGCCTTTTCGGGCGCTTGCGCCCTTGTCTCGTGTACGTATCAGGGCGA CGCCCGTCAACTTTTTCGTGCTTCACCAGAACTAAAAACGTATGATCTGT TCCGTCGTGTGTGTTGGCGTATTCTGTGGGTGCATCTCACGCGTTTCCTG TGTCCCGTGTAACGTGTTTGGCGGAGGGTTCACCACATTGTATTTTTCTC TCGTGTGAGATTGAATAGTTGCCACCTTTCTGAGTGTAGCGCGCTGTCTA TGGCACGGACTGTGTTTTGTGCGTCTTTTGTGCTCCCTTATGTGAGCGTG TTTTGTATTTGCACAGCGCAGTGTGTTTTTCCCCGACCGAGAGTTACCTG CCTTGGCTCTACCGCGGTCTCCGGCCTCGTATCCCCGGCTCCTCGCCTGC CATTGTGCGGTTTGTCCACAGCTCTCTCAAATCTATTTACTTTCTTGCCG GGATTGCGAGCAATGCTGCTGGAATGTTTGTAGTGTCTGCACCGTTCACC GCACCCCTCGTTAGCCTCTGGCCCTCTTGCGTGGCTTCCGCCGGCGATTG AAACCCTTTTCCTGTTCGCGTCGCGCCCCAATTGCCTCGACAGGTGCGTG AGCCGAACCTTCCTGTACGTCCAGTCCATCGTGTTCGTTCTCGCCAAGGC CAGGGCCAAGAAGAGGTTGCACGAGCTGCTCTCGTACGTCATCTTCTTCT GCTGGAACGCCTACCTCTGCAGCCACTTGCAGGTGGGTCAGGGACAATGG TATATGCTTTCTGCTGGGGCAGAATACATTGGAGCGTTGCGGACCTCGCC ATCGTTTGGTCTTTTTTTTTTGTGACTTCGACACGTTCCGGTACATCAGG TGGTACGCGTTTGAGAACGGAGCTTTGAAGTCCTCTGCGGGTTCGTGGAG GGTAGGATGGGCGGTTGAGGAATGCACCGCCACCTCTTGATACTCTTTCG TTCCGGCAAACTCGCGGCCTGTTCCACGGTAAAATTGATACCCACAGCAC GAAGGCTCATGACATTGTTTCGTGTCATCCCGACCGACCTTGCCAAAAAG ATGGGTTCGAACATCCGCAACAGCCGCTGTTGGGCGTGTGTCTTCTCGCA CTTTGGTTCGGTCGAAACACGTCGTGCATCGCTGTTCTCGAACGGTCCAC TCCTTTGATTGCCGGAGGCTACTCGAATCACGCCTCTCGTTCGTCTTGCC AAACGCGCTTCGTCAGCCCTGTCACACTTGTACATGCCGTGTCGACGTGA AAGTTTGGCACGTGCGTGTCGTCCGATAACTCAACCACTGCGTTTCCTGC TGCATTGTTTTTTTCGTTTCATTCTGGCGTTCTCTCAGGGTGCTTGGCCA CGGGCTTCCTACTTCTTGGTATCCCACGCGGTGTCGGGTATCCTGCACGT CCAGATCACGCTCAGCCACTTCTCGATGGACGTCACGGAGCAGCCGCAGT ACCGGTGAGAAGCTGTTTGCCGCGTTGCCGCGTGCAAGTACCACCACGTG TTGGTAATGTACTTGATTGTACGCTCTCGTGTCTTGTACCGGTGTATTCG GAGGCTCGTCTTTTTTTCATCAACATGCAGCAGTTATTGCATTAAGTAGA TTTCAATGATGGATAATTGTATTCTTTGTGTGATCCGCGGATCTCAAGTG CGTCCAGGTAGCGCTCACGTACCTCAGCAAAAGTTTAAAGTCGCAATGCT CACAACGGAATTTACTGTGCCACCAGCAAGAGGTCAGAAGGCTCTTGCAC ATGTATTTAGAGGAAACGCTGTCCACCTAGAGATAAATGAAGACGTCCTC TGAGAACATGTATAGATAGATCATGCTGGCGACGACGTCTCGACACTTTG CTGTTCCCATCACAGTAGACTGCAGTAGATTGTCTCGTCAGGATGAGGCT ACCAGTGTGACTGCTTGGGGATTCCCGTACCAGTGAACGCAAACGTACCA TCCGCATGGCTGGCAGTGATGGAGAAGACAACGGGAAGCCTGAGCAACAC ATGTCCTCGCGTGCGCGACAAAAACAACGTCACGCAACCTCATCAACCTA CCGCCGTTCTTGCGGCTAAACCCCGCTTCTTTTGTTGCGATGTATTCGAA GCAACGACGAGGAAGGATGGGTGGTTACGCAGCTCAACACGACGTTGGAT GTTGACTGCTACCGGTGGATGGACTGGTTCCACGGAGGGCTCCAGTTCCA GGTGCCCGTCCGTTTTGTTAGTCGTCTTTTTTCCGATGGCTGTGTCGGGA ATGATCATGTACGCACAGCTCGGCCCAAGTTTGCTACACCGTGATTTCCC ATAGTCTCACGAGCTTTCTTCGGCGAGGTAGAGGTTGTTCTGGTACCGTC AAGTATGCTGGTAGTGCTGTGGACAATTATCTTGTGGCTGCGTTCAAATC GTTTCGTGCGATGGTGGGACAGGCCACATCGGCGTTGTCGGTTGTTTTGG CGTGCCGACCTTGATCTATGCCCCCGCGCGGACAAGGAAACCGAGGGAGC CGTTTGGGGTTCCGGTTGGTCAGTGTGGGTGCCCCTCATGGCCGGGTCGA ACGGTGCACTGTGCTAGGAGTCTCCTCTGCTGTACTGCCGACCTCGAGCT GCTCTTTTTTCTCCGCGTGCGGTATCTGTCGTCGCCACGCCGGTCATACA AGACGGTTGAGGTAGTTATGCTTCCACAAGGACATCGACTTGCTTCCAAG CAGCCCCGTGGAGGGATCACCTTGAGACAGACCACTTTTAACATAGCCAA TGCTCTCACAAGTTACGGGCCACCAAACACCATGGTTGGGTGGCGACAAA CTGCAGGCGAATTTGCGCGATGCTTTGCAAAAGTAAGGGCCACTTCAGTA TCGGCTCCCGCTTCACCCAGAGGCTGTGTGTTTCGTAATCCCCGTTGACA ACCCACGAATTGTATACTCCTATACGTTTCAGCGTTTCTGGTGCACATTG TTTTTCTTACATGTCACCATTGCTCCCGACCGCGGCGGTTCTCTTGTCCT TTCGCGTTTGTGCTCGCCGCAAAAAAAACTGTGAACGGTTTCTGTACAGA CGCTGCACCACCTCTTCCCGAAGCTGCCGAGGTACAACTTGAGGACGGTC CAGTCGCGCGTCGCTGCCTTGGCCGAAAAGCACGGCCTCACCTACCACCT GTACCCCTTCCTGCAGGCGAACATCAAGACCTACCTGGCGATGAGGGAGA CGGCCCGGCAGGTCAGCGCTTTTCGTCTACGATGCTTCGTGTTGTTCGTG TTGCGAGTGTGGCGATGATGAAAGTGGACCAATCGTTGCGTGCGCTGCAA TGATGCAGTCTCCGGACATGTCAGGGTGGGGTTAGAGACCAACTTTGCCA ATGCCATGCCTCTGGTCTTACCCTCATCGGTGCAATTTTGCTTTCCTTTC TGGCGATATCCGACAGGCCTGGACTAAACCGAACTTCAAGTTTACGGATT CGATGCTCTACGAAGGAGCTTCGTTGGTGGGGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11255:344..4578+

>mRNA_Ecto-sp13_S_contig11255.1116.1 ID=mRNA_Ecto-sp13_S_contig11255.1116.1|Name=mRNA_Ecto-sp13_S_contig11255.1116.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11255:344..4578+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCCTCGGACGACTTCACGGCGTACTGCCTTATCCTTCCCCTTCTCGGGAT
TGGTCCGCAATGGTGGATTGACTCTCACAACATCCACCACGTCGTGTGCA
ACGATGTACACTGCGACCCGGACATCCAGCATCTCCCGTTCATGGCGATT
TCGCCCAAGTTCTTCGCCTCGTTGTACTCGGTGTACCACGACAAGATCAT
GGTCTACGACTTCCTTGGTCGGTGCCTTGTGTCCGTGCAGCATCTTCTTT
TCTACCCCCTCATGTGCGTGAGCCGAACCTTCCTGTACGTCCAGTCCATC
GTGTTCGTTCTCGCCAAGGCCAGGGCCAAGAAGAGGTTGCACGAGCTGCT
CTCGTACGTCATCTTCTTCTGCTGGAACGCCTACCTCTGCAGCCACTTGC
AGGGTGCTTGGCCACGGGCTTCCTACTTCTTGGTATCCCACGCGGTGTCG
GGTATCCTGCACGTCCAGATCACGCTCAGCCACTTCTCGATGGACGTCAC
GGAGCAGCCGCAGTACCGCAACGACGAGGAAGGATGGGTGGTTACGCAGC
TCAACACGACGTTGGATGTTGACTGCTACCGGTGGATGGACTGGTTCCAC
GGAGGGCTCCAGTTCCAGACGCTGCACCACCTCTTCCCGAAGCTGCCGAG
GTACAACTTGAGGACGGTCCAGTCGCGCGTCGCTGCCTTGGCCGAAAAGC
ACGGCCTCACCTACCACCTGTACCCCTTCCTGCAGGCGAACATCAAGACC
TACCTGGCGATGAGGGAGACGGCCCGGCAGGCCTGGACTAAACCGAACTT
CAAGTTTACGGATTCGATGCTCTACGAAGGAGCTTCGTTGGTGGGGTAG
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