prot_Ecto-sp13_S_contig1122.1081.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1122.1081.1
Unique Nameprot_Ecto-sp13_S_contig1122.1081.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1403
Homology
BLAST of mRNA_Ecto-sp13_S_contig1122.1081.1 vs. uniprot
Match: D7FWC6_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC6_ECTSI)

HSP 1 Score: 1703 bits (4411), Expect = 0.000e+0
Identity = 974/1239 (78.61%), Postives = 1009/1239 (81.44%), Query Frame = 0
Query:    1 MCENDTITEGRRGTCLTELTRHRSSVCDAALDTEVGAAVVVPDPQSGLAAKCAREASSEKTAAHKRLLAESLIVFFDKRSSSRQLATQVMVRLVGRLAVVQGADDIIAVVEKLHVLHASRSGINAIITDLDPKIPKLMEFLRLRSLRPGLGKLPVVSVIVVVDPDDLRPELLASAMESGVDAVIRRPLERSSFTSCVGEVLRRHASVEFVYKDVVGEVETFNYPRFLLEGFHFLAVGETSSVGDGVREGDSTFNEIAGDAVRTYTKEASTGSGNGSVTTIGTGGWAQDGIVSPNGENAGQSDPGSGLLRSRSIVGVVSSIEQSASSAXXXXXXXXXXXXXXXVGASTTGTDAMGFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITSSSLRPRLYLYPGDKGYVGSGGSTMNANIDSRNEGKRSSTGCSNGGVGGSGDINGAGGDRDRQNQGGTEVDRRMESERQVSNELAPFVKRRPPVLGDLATSSGLRKERLATTMRLVENTFAFTKGQKANTAWQTKGRTAAAATSPLLRASVPTPGSFATPAGHGPNTITPSAKSRPRAPRNARIGLGFPPGVGATSPGGALPQNRRRPPKATRTAAGPAAEGSWKAATVRAPRPDDGNPVSQKKIFNATGTQGRRAATRAGMFDEVLRSDQTNANPTEMATTGNLRSALGVVMTGETAARVVIARMIRNRKVRMAKTAMSKGGEDGSCGAAAGACAIGPISKGAGRGGQTGGRNKAASRERGGRGGSAEVLKRKLAKGVSTSAGGVSGGLLGEGIFKTVLSSMAKKRLREGLHEIKSNPLDLLRRGFVEVEPAKHGSTALGCHLIKGWEEQKNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMEPFDALKDFSAAISFKLDETHRAALQQSGASNTKRPSNRVTASGNAAGVSTFGRDSGGARTAKGEGASGESNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVAGDTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQMLEQTAADRNATQETIRRPSTPAVKDGLHTGSNTLIGSPTTTGAXXXXXXXXXATGAPEEKEGATRPRAVKGHGKGISSSGGGLVPDGSAAVHARAKSVPSAGARATTVAVAEPGVGTVEKPSAGRRKHVQRCTSSPLSEKTSLGDVGIGDVILTPGKSLLLEENDTPTNPGHG-RRIEEHEGTAEDGRSVAAAADGPATSITRTGTAPMTAGYSLPRGRQG 1238
            MCENDTITEGRRGTCLTELTRH+SSVCDA LD EVGAA V PDPQ GLAAKCARE SSE TAAHKRLLAESLIVF DKRSSSRQLATQ+MVRLVGRLAVVQGADDIIAVVEKLHV HASRSG+NAIITDLDPKIPKLME LRLRSLRPGLGKLP+VSVIVVVDPDDLRPELLASA+ESGVDAVIRRPLERSSFTSCVGEVLR+HASVEFVYKDVVGEVETFNYPRFLLEGFHFL VGET SVG GV EGDSTFNEIAGDAVRTYTKEASTGSGNGSVTT+GTGGWAQDGIVSPNG NAGQS+                                    XXXX  ASTT TDA GFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITS SLRPRLYLY GDKGYVG GGSTMNAN DSR+ GKRSS GCSNGGVGGS       GDRDRQNQGGTEVDRR+ESERQ                                                   AWQ+KGRTAAA TS  LR SVPTPGSF T AGH P      A S  RA RNARIG GFPPGVG   PG ALPQNR RPPK T TA GPAAEGSW+AATVRAPRPD+GNPVSQKKIFNATGTQGRRAATRAGMFDEVLR DQTNANPTEMA+TGNLRSALGVV+TGE AAR+VI RMI+NRK RMAKTAMS GGEDGS GA  GACA GPISK A RGG TGGR+ AA R+RGGRGGSA  LKRK  KGVSTSAGGVSGGLLGEGIFKTVLSSMAKKRLREGL EIKSNPLDLLRRGFVEVEP KHGSTALGCHLIKGWEEQ NGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLME FDALKDFSAAISFKLDETHRAALQQ GASNTKRPSN VTASG+A                       +SNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVA DTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQ+LEQTAADR+ATQETI RP+TPAVKDG HTGS  L GSPTT GA         ATGAPEEK GATRP AVK HGKGISS GGGLVPDGSAAVHARA+S+PSAGAR TT  VAEPGVGTVEKP+AG R+HVQRC SSPL E+TS G+VG+G VI TPGKSLLLEEN TP +PGHG R IEEH+GTA+DG S AAAADGPATS TRTGTA MT GYSLP+GRQG
Sbjct:    1 MCENDTITEGRRGTCLTELTRHKSSVCDAGLDNEVGAAAVAPDPQRGLAAKCAREDSSENTAAHKRLLAESLIVFHDKRSSSRQLATQIMVRLVGRLAVVQGADDIIAVVEKLHVPHASRSGVNAIITDLDPKIPKLMESLRLRSLRPGLGKLPIVSVIVVVDPDDLRPELLASAIESGVDAVIRRPLERSSFTSCVGEVLRKHASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVGETGSVGGGVGEGDSTFNEIAGDAVRTYTKEASTGSGNGSVTTVGTGGWAQDGIVSPNGGNAGQSEA------------------------------PLPTPXXXXXXASTTATDATGFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITSPSLRPRLYLYTGDKGYVGGGGSTMNANTDSRDGGKRSSAGCSNGGVGGSXXXXXXXGDRDRQNQGGTEVDRRVESERQ---------------------------------------------------AWQSKGRTAAAGTSSSLRPSVPTPGSFTTSAGHAPTAAGHGAGSGLRAQRNARIGPGFPPGVGIIPPGRALPQNRTRPPKTTGTAVGPAAEGSWRAATVRAPRPDEGNPVSQKKIFNATGTQGRRAATRAGMFDEVLRRDQTNANPTEMASTGNLRSALGVVVTGEAAARLVIGRMIQNRKARMAKTAMSNGGEDGSRGA--GACAYGPISKRAPRGGLTGGRSMAAGRDRGGRGGSAGALKRKPVKGVSTSAGGVSGGLLGEGIFKTVLSSMAKKRLREGLQEIKSNPLDLLRRGFVEVEPTKHGSTALGCHLIKGWEEQTNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALQQRGASNTKRPSNGVTASGSAGXXXXXXXXXXXXXXXXXXXXXXKSNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQILEQTAADRSATQETISRPATPAVKDGPHTGSIALNGSPTTAGAAGAAE----ATGAPEEKGGATRPWAVKSHGKGISSGGGGLVPDGSAAVHARARSLPSAGARTTTAVVAEPGVGTVEKPTAGHREHVQRCASSPLLERTSHGNVGVGAVIPTPGKSLLLEENKTPASPGHGGRSIEEHKGTAQDGGSAAAAADGPATSSTRTGTATMTTGYSLPKGRQG 1152          
BLAST of mRNA_Ecto-sp13_S_contig1122.1081.1 vs. uniprot
Match: A0A6H5K1M1_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M1_9PHAE)

HSP 1 Score: 1282 bits (3317), Expect = 0.000e+0
Identity = 770/1041 (73.97%), Postives = 805/1041 (77.33%), Query Frame = 0
Query:  375 TKVLTTMRGGHVKITSSSLRPRLYLYPGDKGYVGSGGSTMNANIDSRNEGKRSSTGCSNGGVGGSGDINGAGGDRDRQNQGGTEVDRRMESERQVSNELAPFVKRRPPVLGDLATSSGLRKERLATTMRLVENTFAFTKGQKANTAWQTKGRTAAAATSPLLRASVPTPGSFATPAGHGPNTITPSAKSRPRAP-----RNARIGLGFPPGVGATSPGGALPQNRRRPPKATRTAAGPAAEGSWKAATVRAPRPDDGNPVSQKKIFNATGTQGRRAATRAGMFDEVLRSDQTNANPTEMATTGNLRSALGVVMTGETAARVVIARMIRNRKVRMAKTAMSKGGEDGSCGAAAGACAIGPISKGAGRGGQTGGRNKAASRERGGRGGSAEVLKRKLAKGVSTSAGGVSGGLLGEGIFKTVLSSMAKKRLREGLHEIKSNPLDLLRRGFVEVEPAKHGSTALGCHLIKGWEEQKNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMEPFDALKDFSAAISFKLDETHRAALQQSGASNTKRPSNRVTASGNAAGVSTFGRDSGGARTAKGEGASGESNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVAGDTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQMLEQTAADRNATQETIRRPSTPAVKDGLHTGSNTLIGSPTTTGAXXXXXXXXX-------ATGAPEEKEGATRPRAVKGHGKGISSSGGGLVPDGSAAVHARAKSVPSAGARATTVAVAEPGVGTVEKPSAGRRKHVQRCTSSPLSEKTSLGDVGIGDVILTPGKSLLLEENDTPTNPGHGRRIEEHEGTAEDGRSVAAAADGPATSITRTGTAPMTAGYSLPRGRQGDTHTGCGDDRAADSNNDSSASPATXXXXXTSAAXXXXXXXXXXTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTRTTAGYKSIDAGHSSCSSEHWSDLFRDKRLMEDNFRRRALLRELYLSPAERGEARGNRYPDEDGRGGAESEKRNSGSYGRLRKTSGKG 1403
            TKVLTTMRGGHVKITS SLRPRLYLYPGDKGYVG GGS MNAN DS + G+RSSTGCSNGGVGGS       GDRDR+NQ GTE+DRR+ESERQ                                                   AWQ+KGR  AA TS L R S+PTPGSF TPAGHGP+T  PSA            RNARI LGFPPGVG T PGG + +NR RPPK T TAAGPAAEGSWKAATVRAPRPD+GNP+ QKKIFNATGTQGRRAATRAGMFDEVLRSDQTN NPTE ATTGNLRSALGVV+TGE AAR VI RMIRNRK +MAKTAMSKGGED S G   GACA GPISKGA RGG+TGGR+K A  +R GRGGSA VLK K AKGVS SAGGVSGGLLGEGIFKTVLSSMAKKRLREGLHEIKSNPLDLLRRGF EVEPAKHGSTALGCHLIKGWEEQKNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLME FDALKDFSAAISFKLDETHRAAL+QSGASNTKRPSN VTASGNAAGV T GRD G ART +G G SGESNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVA DTRNIT                GAQQDYSRIRALQMLEQTA DRNA QETI RPSTPAVKDG HTGS  L GSPTT   XXXXXXXXX       ATGAPEEK GA RPRAVK HGKGISSSGGGLV DG AA+HARAKS+PS GAR+TTV VAEPGVG  EKP AG  +HV+RCTSSPL EKT LG+VG+G VI  PGKSLLLEEN TP +PGHG+R+ EHEGTA+DG SVAAAADGPAT ITRTG A  TAGYSLP+GRQGDTHTGCG+DRA DSN D  A PA XXXXX    XXXXXXXXXX                                TTRTTAG KSIDAG SSCSSEHWSDLFRDKRLMEDNFRRRALLREL+LSP + GE R NRYPDEDGRGGAESEKRNSG   RLRKT+GKG
Sbjct:    5 TKVLTTMRGGHVKITSPSLRPRLYLYPGDKGYVGGGGSAMNANTDSHDRGERSSTGCSNGGVGGSXXXXXXXGDRDRRNQSGTELDRRVESERQ---------------------------------------------------AWQSKGRRVAADTSSLFRPSIPTPGSFTTPAGHGPSTTAPSAAGXXXXXXXXXRRNARIDLGFPPGVGVTPPGGVIRRNRTRPPKTTGTAAGPAAEGSWKAATVRAPRPDEGNPMCQKKIFNATGTQGRRAATRAGMFDEVLRSDQTNVNPTETATTGNLRSALGVVVTGEAAARAVIGRMIRNRKAKMAKTAMSKGGEDCSSGVTVGACAHGPISKGADRGGKTGGRSKVACGDREGRGGSAGVLKNKPAKGVSISAGGVSGGLLGEGIFKTVLSSMAKKRLREGLHEIKSNPLDLLRRGFAEVEPAKHGSTALGCHLIKGWEEQKNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALRQSGASNTKRPSNWVTASGNAAGVYTHGRDGGEARTGQGGGTSGESNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNIT----------------GAQQDYSRIRALQMLEQTATDRNAIQETISRPSTPAVKDGPHTGSIALNGSPTTAAXXXXXXXXXXXXXXXXGATGAPEEKGGARRPRAVKSHGKGISSSGGGLVSDGPAAMHARAKSLPSTGARSTTVVVAEPGVGMAEKPPAGHHEHVRRCTSSPLLEKTFLGEVGVGSVIPAPGKSLLLEENKTPASPGHGQRVMEHEGTAQDGGSVAAAADGPATFITRTGAATRTAGYSLPKGRQGDTHTGCGNDRATDSN-DIPAPPAXXXXXXXXXXXXXXXXXXXXXXTM----------------------------TTRTTAGDKSIDAGLSSCSSEHWSDLFRDKRLMEDNFRRRALLRELHLSPTDGGEGRRNRYPDEDGRGGAESEKRNSGGCDRLRKTTGKG 949          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1122.1081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWC6_ECTSI0.000e+078.61Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5K1M1_9PHAE0.000e+073.97Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 987..1022
e-value: 460.0
score: 0.4
coord: 863..896
e-value: 100.0
score: 6.1
coord: 829..862
e-value: 32.0
score: 10.6
coord: 953..986
e-value: 16.0
score: 13.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 831..912
e-value: 6.8E-7
score: 30.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 946..1043
e-value: 4.1E-9
score: 38.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 832..1017
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 840..1013
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 840..1013
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 829..896
score: 8.115
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 953..1020
score: 9.294
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 72..201
score: 10.801

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1122contigEcto-sp13_S_contig1122:419..12170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1122.1081.1mRNA_Ecto-sp13_S_contig1122.1081.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1122 419..12170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1122.1081.1 ID=prot_Ecto-sp13_S_contig1122.1081.1|Name=mRNA_Ecto-sp13_S_contig1122.1081.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1403bp
MCENDTITEGRRGTCLTELTRHRSSVCDAALDTEVGAAVVVPDPQSGLAA
KCAREASSEKTAAHKRLLAESLIVFFDKRSSSRQLATQVMVRLVGRLAVV
QGADDIIAVVEKLHVLHASRSGINAIITDLDPKIPKLMEFLRLRSLRPGL
GKLPVVSVIVVVDPDDLRPELLASAMESGVDAVIRRPLERSSFTSCVGEV
LRRHASVEFVYKDVVGEVETFNYPRFLLEGFHFLAVGETSSVGDGVREGD
STFNEIAGDAVRTYTKEASTGSGNGSVTTIGTGGWAQDGIVSPNGENAGQ
SDPGSGLLRSRSIVGVVSSIEQSASSAAAPPEAPLPTPLETPVGASTTGT
DAMGFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITSSSLRPRLYLY
PGDKGYVGSGGSTMNANIDSRNEGKRSSTGCSNGGVGGSGDINGAGGDRD
RQNQGGTEVDRRMESERQVSNELAPFVKRRPPVLGDLATSSGLRKERLAT
TMRLVENTFAFTKGQKANTAWQTKGRTAAAATSPLLRASVPTPGSFATPA
GHGPNTITPSAKSRPRAPRNARIGLGFPPGVGATSPGGALPQNRRRPPKA
TRTAAGPAAEGSWKAATVRAPRPDDGNPVSQKKIFNATGTQGRRAATRAG
MFDEVLRSDQTNANPTEMATTGNLRSALGVVMTGETAARVVIARMIRNRK
VRMAKTAMSKGGEDGSCGAAAGACAIGPISKGAGRGGQTGGRNKAASRER
GGRGGSAEVLKRKLAKGVSTSAGGVSGGLLGEGIFKTVLSSMAKKRLREG
LHEIKSNPLDLLRRGFVEVEPAKHGSTALGCHLIKGWEEQKNGNKSRALG
HFRRAVASEPENVEALFCKAVLSAQLMEPFDALKDFSAAISFKLDETHRA
ALQQSGASNTKRPSNRVTASGNAAGVSTFGRDSGGARTAKGEGASGESNV
SLAHLYGNRALVHVCLGDDDSALDDLDRAVAGDTRNITYRSNRALILRRV
GDFRGAQQDYSRIRALQMLEQTAADRNATQETIRRPSTPAVKDGLHTGSN
TLIGSPTTTGAGAGVAAGAGATGAPEEKEGATRPRAVKGHGKGISSSGGG
LVPDGSAAVHARAKSVPSAGARATTVAVAEPGVGTVEKPSAGRRKHVQRC
TSSPLSEKTSLGDVGIGDVILTPGKSLLLEENDTPTNPGHGRRIEEHEGT
AEDGRSVAAAADGPATSITRTGTAPMTAGYSLPRGRQGDTHTGCGDDRAA
DSNNDSSASPATTAAAATSAAATTAATTTAATAATAATTTAATTAAAAAT
VATATAAVAASTPTTRTTAGYKSIDAGHSSCSSEHWSDLFRDKRLMEDNF
RRRALLRELYLSPAERGEARGNRYPDEDGRGGAESEKRNSGSYGRLRKTS
GKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR001789Sig_transdc_resp-reg_receiver