mRNA_Ecto-sp13_S_contig11219.1080.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A6H5J7G6_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7G6_9PHAE) HSP 1 Score: 349 bits (896), Expect = 2.280e-115 Identity = 178/182 (97.80%), Postives = 179/182 (98.35%), Query Frame = 1
Query: 1 QIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDAIDDDDSGLSLGTFGKDLPEGGEGAEEMVALLASDGD 546
+IGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVF SMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDT LPGCPYLIAAVVCLAALLLSYEIPDAIDDDDSGL LGTFGKDLPEGGEGAEEMVALLASDGD
Sbjct: 289 KIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFLSMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTLLPGCPYLIAAVVCLAALLLSYEIPDAIDDDDSGLLLGTFGKDLPEGGEGAEEMVALLASDGD 470
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A836CJ60_9STRA (Hippocampus abundant transcript 1 protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ60_9STRA) HSP 1 Score: 218 bits (554), Expect = 2.720e-64 Identity = 117/179 (65.36%), Postives = 138/179 (77.09%), Query Frame = 1
Query: 4 IGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDAIDDDDSGLSLGTFGKDLPEGGEGAEEMVALLASD 540
+GQLL FG CTMFAEGVLVR++VP LGEKLT+Q+GLLGF AQCV++GLA S +M+FASMGGSLLSNLVYP++SSL+SRSV+T+ QGEVLG INGVRALTEGFGPL+F L E T LPG PYLIA V + AL+ S+ IPD DD L +GTFG D G A E+ LLA+D
Sbjct: 286 VGQLLGMFGACTMFAEGVLVRYLVPWLGEKLTMQLGLLGFTAQCVMIGLADSPYMIFASMGGSLLSNLVYPAMSSLVSRSVSTAAQGEVLGTINGVRALTEGFGPLIFGALMSQFEGTLLPGAPYLIAGGVSVGALVYSFGIPDETDD---ALCVGTFGADSD--GFAAVELQPLLAAD 459
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A7S2XVJ1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ1_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.440e-54 Identity = 93/145 (64.14%), Postives = 115/145 (79.31%), Query Frame = 1
Query: 1 QIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPD 435
+GQLLSAFGVCTMFAEGVLVR MVP+LGE+LTLQIGLLGFA QC+ +GLA W+++ SM S+LSNLVYP++SS++SR V ++ G LGA+NGV+ALTEGFGPL F L + EDT LPG PYLIAA+ + ALL SY + +
Sbjct: 78 MVGQLLSAFGVCTMFAEGVLVRIMVPRLGERLTLQIGLLGFACQCITIGLAKDTWVLYLSMLFSVLSNLVYPALSSMVSRGVGPNQVGVALGAMNGVKALTEGFGPLCFGALLFQFEDTRLPGAPYLIAAMFAIGALLASYSLKE 222
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A6V3A0Z0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3A0Z0_HETAK) HSP 1 Score: 182 bits (461), Expect = 9.800e-51 Identity = 94/180 (52.22%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 1 QIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDAIDDDDSGLSLGTFGKDLPEGGEGAEEMVALLASD 540
IG L+S+FGVCTMF+EG+LVR+MVP GE+LTLQ+GLLGF+ +CV++GLA WM+++ M S+ SNLVYPS+SSL+SR V +QGE LGA+NGV+ALTEGFGPLLF L E T +PG PYL+AA AL+ S+ +P+ D + G + E A E+V LL+ +
Sbjct: 276 MIGYLMSSFGVCTMFSEGILVRYMVPMFGERLTLQLGLLGFSMKCVIIGLASQAWMIYSVMLVSVFSNLVYPSLSSLVSRGVGAGRQGEALGALNGVKALTEGFGPLLFGHLLAAFEGTVVPGAPYLVAAAFAAGALVTSFALPE-----DPDAAAGAWAARHTEDAADALELVNLLSGE 450
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A4D9D9X9_9STRA (MFS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9X9_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.350e-41 Identity = 91/180 (50.56%), Postives = 118/180 (65.56%), Query Frame = 1
Query: 4 IGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDAIDDDDSGLSLGTFGKDLPEGGEGAEEMVALLASDG 543
+G+L+SAFGVCTM +EGVLVR MVP GEK +QIGL FA QC A V S+ S L+NLVYP++SSL+SRSV SKQGE LGA+NG+RALTEGFGPLLF L + +DT PG PYL+A+ +AALL + ++P S + + K + + G +E V LL+ +G
Sbjct: 316 LGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLP-------SEAEIWEYEKRVSKQA-GLQEAVGLLSEEG 487
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A1E7FRL6_9STRA (MFS general substrate transporter (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRL6_9STRA) HSP 1 Score: 152 bits (384), Expect = 6.110e-40 Identity = 72/143 (50.35%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 4 IGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIP 432
+G+L+S G+ TM AE +L+RW+VP LGEK T+++GL+ F QC++LG A+ W +F +G SLL NLVYPS+SSL+S V K GE LGAING++ALTEG GPL F L ++E T PG PY +A ++ A L+ ++P
Sbjct: 254 LGELMSCLGLSTMVAEAILIRWLVPMLGEKQTIRVGLISFGLQCIVLGAANEPWQLFLCVGLSLLGNLVYPSLSSLVSGIVEPKKVGEALGAINGIKALTEGIGPLFFGTLMTFSEGTAFPGSPYWLAGILVFVAYHLADKLP 396
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A7S1D8G3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8G3_CYCTE) HSP 1 Score: 147 bits (370), Expect = 3.190e-39 Identity = 73/150 (48.67%), Postives = 104/150 (69.33%), Query Frame = 1
Query: 1 QIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDAIDDD 450
++G+L+SA G+ TM AE VLVR +VP LGEK ++++GL F QC++LG A W +F + S++ NLVYPS++SL+S SV GE LGA+NG++ALTEG GPL+F L +E++ LPG PYL+AAV+ A + +PD +DD
Sbjct: 15 RLGELMSALGLSTMLAEAVLVRILVPMLGEKKSMRVGLAAFGFQCIVLGFAFEGWHLFVCIIFSMVGNLVYPSLTSLVSASVEPEALGEALGAVNGIKALTEGIGPLVFGSLMTLSENSSLPGSPYLLAAVLVFFAYRYADRLPDVQNDD 164
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A1Z5JPM2_FISSO (MFS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPM2_FISSO) HSP 1 Score: 152 bits (385), Expect = 3.790e-39 Identity = 79/150 (52.67%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 1 QIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDAIDDD 450
++G+L+SA G+ TM AE VLVR+MVP LGEK +++GL+ F QCV+LG A W +F SLL NLVYPS+SSL+S SV GE LGAING++ALTEG GPL+F L +E + LPG PYL+A+++ AA ++ E+PD +DD
Sbjct: 337 RLGELMSALGLSTMLAEAVLVRFMVPWLGEKKAMKVGLVSFGLQCVVLGFATEGWHLFVCAMFSLLGNLVYPSLSSLVSGSVEPDAVGEALGAINGIKALTEGIGPLVFGSLMTLSEASPLPGWPYLLASLLVFAAYRVADELPDLEEDD 486
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A7S1UG73_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG73_9STRA) HSP 1 Score: 150 bits (378), Expect = 4.750e-38 Identity = 73/150 (48.67%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 1 QIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDAIDDD 450
+GQL+SA+G+CTM +EGVLVR MVP GE +GL GFA QCV++ A ++++ SM G+L +NL YPSIS+LISR+V+ ++QGE LGA+NG+++L EG GPL+F L +E+T +PG PYL+AA A + ++P ++ D
Sbjct: 306 MVGQLMSAYGLCTMISEGVLVRIMVPLFGEPFCAVLGLAGFALQCVIIAFADRPFVMYLSMVGALFANLFYPSISALISRTVSPAQQGEALGALNGIKSLCEGVGPLVFGTLMTASENTAMPGAPYLVAAAAAAVAGWHALDLPKLVEAD 455
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Match: A0A7S0C6V0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C6V0_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.220e-36 Identity = 76/150 (50.67%), Postives = 103/150 (68.67%), Query Frame = 1
Query: 1 QIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDAIDDD 450
++G+L+SAFG+CTM AE VLVR +VP +GE ++Q GL+ FA QC +L A W +F + S ++NLVYPS++SLIS VA GE LGAINGV+ALTEG GPLLF L +E++ PG PYL+A++ L AL + +P D+D
Sbjct: 308 RLGELMSAFGLCTMVAEAVLVRIIVPAVGEIRSMQYGLIAFALQCAVLAFAFEGWQLFLCVFLSTMTNLVYPSLTSLISHVVADDAVGEALGAINGVKALTEGIGPLLFGGLMTLSENSRFPGWPYLLASMFSLLALARTRHLPTGSDND 457 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11219.1080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11219.1080.1 >prot_Ecto-sp13_S_contig11219.1080.1 ID=prot_Ecto-sp13_S_contig11219.1080.1|Name=mRNA_Ecto-sp13_S_contig11219.1080.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp MFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGback to top mRNA from alignment at Ecto-sp13_S_contig11219:3524..5136- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11219.1080.1 ID=mRNA_Ecto-sp13_S_contig11219.1080.1|Name=mRNA_Ecto-sp13_S_contig11219.1080.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1613bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11219:3524..5136- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11219:3524..5136- >mRNA_Ecto-sp13_S_contig11219.1080.1 ID=mRNA_Ecto-sp13_S_contig11219.1080.1|Name=mRNA_Ecto-sp13_S_contig11219.1080.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11219:3524..5136- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |