mRNA_Ecto-sp13_S_contig10078.107.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10078.107.1
Unique NamemRNA_Ecto-sp13_S_contig10078.107.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: D8LSP2_ECTSI (Flagellar radial spoke protein 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP2_ECTSI)

HSP 1 Score: 605 bits (1559), Expect = 1.120e-216
Identity = 315/344 (91.57%), Postives = 322/344 (93.60%), Query Frame = 1
Query:    1 TEASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKVILRRLLSPEINMKGDGAAVDAEGGDEDPTSGDSGENPKGDP-EGEAALQTGLAGKASSLA-SSDIAGIACQE 1026
            TEASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKK+G RKPNPVTRDLACSLEELYNGCTKAFKVTRK          RLNEAGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHE+FSREGNDLIYTSM+SLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKV+LRRLLSPEINMKG GAAV AE G  DPTSGDSGENP+G+P EGEAALQTGLAGK   LA SSDIAGI+ QE
Sbjct:   46 TEASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKKQGPRKPNPVTRDLACSLEELYNGCTKAFKVTRK----------RLNEAGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEYFSREGNDLIYTSMLSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKVVLRRLLSPEINMKGAGAAVAAEEGGGDPTSGDSGENPEGNPAEGEAALQTGLAGKTLPLAPSSDIAGISRQE 379          
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: A0A836C9Z0_9STRA (DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Z0_9STRA)

HSP 1 Score: 376 bits (965), Expect = 6.670e-127
Identity = 181/284 (63.73%), Postives = 217/284 (76.41%), Query Frame = 1
Query:    4 EASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSR-EGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKVILRRLLSPEINM 852
            EAS+ FQ IGEAYDVLSDK  RA+YD+YG EGLR+GVPG DG    GY YKQN  EIFESFFGT NPF DFGFGD+ PFA+RL+K G RK  PV RDL C+LEEL+NGCTK  K+TRK          R    GEL + S ++TV V+PGWK+GT++TFP EGDE  G++PADVV VV E PH  FSR +G  L+Y + +SLADALTDC++EVPTLDGRVL LPCPEVVSPGYE+R+  EGMPISK PG RGDL++RFK+VFP +LP   K+ +R +L+ EI+M
Sbjct:   43 EASRTFQEIGEAYDVLSDKAKRAVYDRYGYEGLRDGVPGPDGAPGTGYNYKQNAAEIFESFFGTRNPFADFGFGDSTPFAARLRKPGPRKAEPVVRDLVCTLEELFNGCTKRLKITRK----------RFAPDGELRDESKEVTVDVRPGWKRGTRVTFPSEGDEAPGIVPADVVFVVQEAPHARFSRGDGAQLVYCAPLSLADALTDCVLEVPTLDGRVLSLPCPEVVSPGYEKRVPKEGMPISKKPGQRGDLILRFKIVFPKYLPDDKKLKIRHILAGEIDM 316          
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: A0A7S2V156_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V156_9STRA)

HSP 1 Score: 372 bits (955), Expect = 1.150e-125
Identity = 179/281 (63.70%), Postives = 215/281 (76.51%), Query Frame = 1
Query:    4 EASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKVILRRLLSPEI 846
            EA   FQ IGEAY+VLSDK+ RAIYDQYG EGLR+G+P   G    GYTYKQN Q IFESFFGT NPF DFGFG+TMPFASRL+K G +K +P+ +DL C+LEEL+NGCTK  K+TR   DT          +GEL E++  LT+ VKPGWKKGTKITFP EGDE   ++PADVV VV E+ HEFF REG++LIY + ++LADALTDC IEVPTLDGR L LPCPEVVSPGYE+ + GEGMP+SK  G RG+L+IRFK++FP +LP   K  LR+LL+ E+
Sbjct:   44 EAGIKFQEIGEAYEVLSDKERRAIYDQYGYEGLRDGIPDSSGETKGGYTYKQNAQGIFESFFGTKNPFSDFGFGETMPFASRLQKPGPKKADPIAQDLPCTLEELFNGCTKRLKITRTRFDT----------SGELVESTKMLTINVKPGWKKGTKITFPCEGDERPNIIPADVVFVVTEKEHEFFGREGSNLIYNAQITLADALTDCCIEVPTLDGRTLSLPCPEVVSPGYEKTIVGEGMPLSKKVGQRGELIIRFKILFPRYLPEEKKAKLRQLLAGEV 314          
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: A0A7S3UUU7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUU7_HETAK)

HSP 1 Score: 369 bits (946), Expect = 1.000e-123
Identity = 181/300 (60.33%), Postives = 221/300 (73.67%), Query Frame = 1
Query:    4 EASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKVILRRLLSPEINMKGD-----GAAVDAEGG 888
            EA+  FQ +GEAYDVLSD++ RA+YDQYG EGLR+GVP  +G    GY+YK N +EIFE FFGT NPF+DF FGD MPF SRL+K   +K  P+ +DL CSLEEL+NGCTK  K+TRK          R    G+L +    +T+ VKPGWKKGTKITFP EGDE   V+PADVV V+ E+ H++F REGN+L+Y S ++LADALTDC IEVPTLDGRVL LPCPEVV+PGYE+RLEGEGMP+SK PG RG LL+RF+L+FP +LP   KV LRRLL+ E+ +  D      AA  A+GG
Sbjct:   63 EAANKFQEVGEAYDVLSDQEKRAVYDQYGYEGLRDGVPDDNGEMQTGYSYKNNAEEIFEKFFGTKNPFMDFKFGDGMPFQSRLEKPAPKKAPPIIQDLPCSLEELFNGCTKRLKITRK----------RFTPEGDLVDEDKIVTINVKPGWKKGTKITFPCEGDEKPNVIPADVVFVITEQEHDYFGREGNNLVYNSKITLADALTDCCIEVPTLDGRVLSLPCPEVVAPGYEKRLEGEGMPLSKQPGRRGALLVRFRLLFPKYLPEHKKVELRRLLAGEVVVDDDVSEAPSAAKGAKGG 352          
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: F0XW96_AURAN (J domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW96_AURAN)

HSP 1 Score: 315 bits (807), Expect = 3.000e-103
Identity = 156/280 (55.71%), Postives = 201/280 (71.79%), Query Frame = 1
Query:    4 EASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNE--AGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKVILRRLLS 837
            EA++ FQ+IGEAY VLSDK  +AIYDQ+G E LR+GVP   G    G++YKQN +EIFE+FFGT NPF DFGFGD++PFA+RL+K G +K +P+ R L C+LEEL+NGC K F VTRK         G  +E  A +  + +  LT+AVKPGWKKGTK+TF  EGD    V+PAD+V  + E PH  FSREG +L++ + + LADAL    IEVPTLDGR L + CPEVVSPGYE+ + GEGMP+SK P  RG+L+IRF +VFP +L  A K  L+++L+
Sbjct:   49 EAAQKFQDIGEAYSVLSDKAKKAIYDQHGYEALRDGVPDDQGGMRGGWSYKQNAKEIFENFFGTANPFADFGFGDSVPFATRLRKVGPKKMSPIPRGLDCTLEELFNGCVKKFHVTRKR------LKGAADEGAAPDYVDETKALTIAVKPGWKKGTKVTFANEGDAAPNVVPADIVFTLNELPHGTFSREGANLVFVATVDLADALCGTTIEVPTLDGRKLSVSCPEVVSPGYEKTVPGEGMPLSKTPDVRGNLVIRFHIVFPKYLEQAQKDTLKKVLA 322          
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: A0A7S1TXQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXQ9_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.020e-94
Identity = 144/261 (55.17%), Postives = 181/261 (69.35%), Query Frame = 1
Query:    4 EASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVF 786
            EA+  FQ +GEAY+VL+DK+ RA+YD +G + L  G P        GY YKQNG+EIFE+FFGT NPF   GFGD  PF SRL K+   KP  V  DLAC+LEELYNGCTK  +VTR+     ++  G   EA    E  T LT+ V+PGW+ GTK+TFPG GDE  G L  D+V V+ E  H  F+RE  +L+YT+ +SLADALT+C + VP LDGR L LPCPEVVSPGYE+ +  EGMP+SK+PG RGD+L+RF ++F
Sbjct:   41 EAAARFQELGEAYEVLTDKEKRAVYDAHGYDALVNGAPDGAAGGGGGYVYKQNGKEIFEAFFGTSNPFDAMGFGDAAPFESRLNKEAPTKPPAVLHDLACTLEELYNGCTKRVRVTRQ-----RFPAGAAPEADTQPETVT-LTINVQPGWRAGTKVTFPGAGDEAPGSLAPDLVFVIQEAAHTRFTREKANLVYTAHISLADALTECALSVPMLDGRTLSLPCPEVVSPGYEKVIPSEGMPVSKSPGQRGDMLVRFNIIF 295          
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: A0A7S1CED9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CED9_9STRA)

HSP 1 Score: 274 bits (700), Expect = 3.790e-87
Identity = 146/287 (50.87%), Postives = 187/287 (65.16%), Query Frame = 1
Query:    7 ASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVP-GQDGRKPEGYTYKQ-NGQEIFESFFGTHNPFVDFGFGDTMPFASRLK------KKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGELAEASTQ-LTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNP--GSRGDLLIRFKLVFPAFLPHASKVILRRLL 834
            AS+ F+ I EAYDVLSDK+ RA YDQYGA+GL+ GVP G+ G +  GY ++Q +   IFESFFGT NPF DFG G  M               G RK   + R L CSLEEL+NGCTK  ++TRK          +LN  G       + L + VK GWK GT ITFP EGDEG G++PAD+  VVAE+PH  FSR+GN+L++ + ++L DALTDC++EV TLDGR L +PC EV+SPG  + + GEGMPISK    G+RGDL+++F +VFP+ +    K  LR LL
Sbjct:   42 ASEQFKLINEAYDVLSDKEKRATYDQYGADGLKGGVPDGRGGTRGGGYEFRQADASRIFESFFGTSNPFADFGMGGGMXXXXXXXXXXXXXSAGPRKQATIQRKLQCSLEELFNGCTKRIRITRK----------KLNPDGRTTRMEEKILEIRVKAGWKAGTTITFPNEGDEGPGIVPADIAFVVAEKPHPRFSRDGNNLVHNARVTLRDALTDCVVEVATLDGRTLSIPCNEVISPGATKVVPGEGMPISKAAAAGTRGDLILKFTIVFPSHISEDKKRQLRTLL 318          
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: A0A7S3ZLC2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLC2_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.300e-85
Identity = 138/283 (48.76%), Postives = 181/283 (63.96%), Query Frame = 1
Query:    4 EASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGE------LAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKVILRRLL 834
            EA  +FQ++GEAY VL+DK+ +A++DQYG E LR+GVP   G    G+TY QN +EIF  FFGT NPF DFGFG  +PFASR+ K G  K   + R + CSLEELY GC K F VTRK          RL +  E        + + +LTVA+KPGW+  TK+TFPGEGDEG G++PAD+   V E PH  F+R+G +L+Y   +SL+ AL    + +  LDGR L + CPEVV PGYE+ ++GEGM   ++   RGDL IRF + FP FL    K  +++ L
Sbjct:   49 EALAVFQDVGEAYTVLTDKQKKAVFDQYGYEALRDGVPDDTGGYQGGWTYTQNAREIFTEFFGTDNPFADFGFGSDVPFASRMAKAGPTKMKAIARPMDCSLEELYCGCLKTFNVTRK----------RLVQPVEDEDNPIYEDVTKKLTVAIKPGWRAKTKVTFPGEGDEGPGIIPADICFSVRELPHAHFTRDGLNLLYIHTISLSSALCGHTVNIKHLDGRTLNVSCPEVVQPGYEKVVKGEGMVKGED---RGDLTIRFNIEFPKFLEGPQKEHIQKAL 318          
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: H3G8B0_PHYRM (J domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3G8B0_PHYRM)

HSP 1 Score: 264 bits (675), Expect = 6.850e-84
Identity = 138/278 (49.64%), Postives = 178/278 (64.03%), Query Frame = 1
Query:    4 EASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQE-IFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKVILRRLL 834
            EA   FQ I EAYDVLSD + RA++DQYG +GL+ GVP ++G   +GY + +   E +F  FFGT+NPF DFGFGDT+PFAS L+KKG  K   + R+LAC+LEEL+ G TK+  V RK          RL     +A+A T   V VKPGWK GTKITF  EG+E       DV+  VA++ H  F R+G  L++T+ + L++AL D  +EVPTLDGR L + C EVVSP  E+ ++ EGMPIS  PG RGDL IRF + FP  L    K  L ++L
Sbjct:   14 EAQYRFQEISEAYDVLSDPERRAVFDQYGYDGLKNGVPDENGDMRDGYAFNERASEDVFNKFFGTNNPFGDFGFGDTLPFASSLRKKGPEKAEAIVRELACTLEELFQGTTKSVIVERK----------RLQNDELVADAKT-FVVKVKPGWKAGTKITFDREGNETRTNEAGDVIFQVAQQEHNLFKRDGAHLVFTAKLKLSEALGDYCVEVPTLDGRKLAISCNEVVSPSSEKVVKKEGMPISSQPGERGDLRIRFDITFPRHLTTLQKTALAKIL 280          
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Match: A0A0P1AU87_PLAHL (Dnaj heat shock protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AU87_PLAHL)

HSP 1 Score: 262 bits (669), Expect = 1.270e-82
Identity = 133/278 (47.84%), Postives = 177/278 (63.67%), Query Frame = 1
Query:    4 EASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYTYKQNGQE-IFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLACSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGELAEASTQLTVAVKPGWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMMSLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGSRGDLLIRFKLVFPAFLPHASKVILRRLL 834
            EA   FQ I EAYDV+SD + RA++DQYG +GL+ GVP ++G   +GY + +   E +F  FFGT NPF+DFGFGDT PFAS L+ KG +K  P+  DL+C+LEEL+ G +K+  + RK          RL    EL + +    + +KPGWK GTKITF  EG+E     P DV+  V ++ H  F R+G  LI+T+ + L++AL D  IEVPTLD R L +PC EV+SP  E+ ++ EGMPIS  PGSRGDL IRF + FP  L    K  L ++L
Sbjct:   40 EAQYRFQEISEAYDVMSDPERRAVFDQYGYDGLKNGVPDENGDMRDGYAFNERASEDVFNKFFGTSNPFMDFGFGDTQPFASSLRNKGPQKAEPIMADLSCTLEELFLGTSKSVVIARK----------RLLH-DELVDDAKTFLIKIKPGWKAGTKITFDREGNETRTNEPGDVIFQVVQQEHNVFKRDGAHLIFTAKIKLSEALGDYCIEVPTLDSRKLAIPCNEVISPTSEKLIKNEGMPISNQPGSRGDLRIRFSITFPRHLTKLQKTALAKVL 306          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10078.107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSP2_ECTSI1.120e-21691.57Flagellar radial spoke protein 16 n=1 Tax=Ectocarp... [more]
A0A836C9Z0_9STRA6.670e-12763.73DnaJ domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2V156_9STRA1.150e-12563.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UUU7_HETAK1.000e-12360.33Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0XW96_AURAN3.000e-10355.71J domain-containing protein n=1 Tax=Aureococcus an... [more]
A0A7S1TXQ9_9STRA2.020e-9455.17Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1CED9_9STRA3.790e-8750.87Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3ZLC2_9STRA1.300e-8548.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
H3G8B0_PHYRM6.850e-8449.64J domain-containing protein n=17 Tax=Phytophthora ... [more]
A0A0P1AU87_PLAHL1.270e-8247.84Dnaj heat shock protein n=1 Tax=Plasmopara halsted... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10078contigEcto-sp13_S_contig10078:1837..5944 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score610.9
Seed ortholog evalue3.6e-172
Seed eggNOG ortholog2880.D8LSP2
Model size1029
KEGG koko:K09510,ko:K09519
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.protein folding
EggNOG OGsCOG0484@1,KOG0714@2759
Ec32 ortholog descriptionflagellar radial spoke protein 16
Ec32 orthologEc-15_003130.1
Cds size1029
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10078.107.1prot_Ecto-sp13_S_contig10078.107.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10078 1837..5944 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462505.9504297-CDS-Ecto-sp13_S_contig10078:1836..20521681462505.9504297-CDS-Ecto-sp13_S_contig10078:1836..2052Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10078 1837..2052 -
1681462505.963161-CDS-Ecto-sp13_S_contig10078:2768..29451681462505.963161-CDS-Ecto-sp13_S_contig10078:2768..2945Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10078 2769..2945 -
1681462505.97266-CDS-Ecto-sp13_S_contig10078:3291..33821681462505.97266-CDS-Ecto-sp13_S_contig10078:3291..3382Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10078 3292..3382 -
1681462505.9815402-CDS-Ecto-sp13_S_contig10078:3930..40881681462505.9815402-CDS-Ecto-sp13_S_contig10078:3930..4088Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10078 3931..4088 -
1681462505.9978952-CDS-Ecto-sp13_S_contig10078:4453..46721681462505.9978952-CDS-Ecto-sp13_S_contig10078:4453..4672Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10078 4454..4672 -
1681462506.0118725-CDS-Ecto-sp13_S_contig10078:5101..51581681462506.0118725-CDS-Ecto-sp13_S_contig10078:5101..5158Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10078 5102..5158 -
1681462506.0206287-CDS-Ecto-sp13_S_contig10078:5833..59441681462506.0206287-CDS-Ecto-sp13_S_contig10078:5833..5944Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10078 5834..5944 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10078.107.1

>prot_Ecto-sp13_S_contig10078.107.1 ID=prot_Ecto-sp13_S_contig10078.107.1|Name=mRNA_Ecto-sp13_S_contig10078.107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp
TEASKIFQNIGEAYDVLSDKKNRAIYDQYGAEGLREGVPGQDGRKPEGYT
YKQNGQEIFESFFGTHNPFVDFGFGDTMPFASRLKKKGARKPNPVTRDLA
CSLEELYNGCTKAFKVTRKARDTRQYFLGRLNEAGELAEASTQLTVAVKP
GWKKGTKITFPGEGDEGAGVLPADVVLVVAERPHEFFSREGNDLIYTSMM
SLADALTDCIIEVPTLDGRVLRLPCPEVVSPGYERRLEGEGMPISKNPGS
RGDLLIRFKLVFPAFLPHASKVILRRLLSPEINMKGDGAAVDAEGGDEDP
TSGDSGENPKGDPEGEAALQTGLAGKASSLASSDIAGIACQE*
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mRNA from alignment at Ecto-sp13_S_contig10078:1837..5944-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10078.107.1 ID=mRNA_Ecto-sp13_S_contig10078.107.1|Name=mRNA_Ecto-sp13_S_contig10078.107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4108bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10078:1837..5944- (Ectocarpus species13 EcNAP12_S_4_19m)
ACTGAAGCGTCGAAGATTTTTCAAAACATTGGGGAGGCCTACGACGTGCT GAGCGACAAGAAAAACCGGGCAATCTACGACCAATACGGCGCAGAAGGTC TCCGTGAGGGAGTGAGTATCTCCCGAGCTCGCGGGTTGGTGGTGTAGAAG CTACACGAAAAACCAAATCTTGGTCAAGGCGTCCAGGAAAAATGGGTCCA AACGAGAGAAACATCCCGACACAACATACCCGCAGAGTCGCTTATGCTCT AAGTTGCCTTCTGAAAGACAAGCTTCTTTGCGTCGATGAGAGGCGGCGTA CTGCTGAGCATCGTCAATAGCGCGGAGCTCAAACGTTCGTTCTTCGCACG TCTTTATTGCGGTATCCACAAGAGATGAAACGCCCATTCTACCTCCCTCC GGCTGCTTAGACGTCTATATTTACATGTAGAGGGGAAAGCGGGGATGATA CGACACAGCGCGATAGAGAGTCCACTGATTGCTTGGGAATTTCGCATACG CTTGCTTTTTTTAATAGCCGATGAACAAGAAAGACACGGACCATCCGGTA AAAGACGAACGTACTCGCTGAATGAATTGAAAAAATATAATGGAAACAAC GCAAACGAATTCTTTGGATTTACAATTTACAAAAGGTCATTGTATGTACC GTACGACAACACCATCTTGTACATACTGTGTTGACAGCCCCGCGCTGCGT GCGACGTTGAAAATGCAGTGCACGCTCCACAAATCATCCTCCCCATCTAA GCTGGAACCGGGGTAACCACCGTCGACCCCTGGCAGGTTCCTGGACAAGA TGGGAGAAAGCCGGAGGGCTATACCTATAAGCAGAACGGGCAGGTGGGGT CGTCTTGAGAACTTTCATGGTTCGCGGTAGGCCACTGCTATCGTCGTGTG ATCGGAACGAGATTCTGTATACGTGACCTTCGCAGAACGATTGCATAATG GGGAAATTGCTTGCGACTCTGAAAAGCGGGTGGCGTTGAACGATCACCCA TATGCTAAACACAAGGAGAGTATCGGTGAATGAGGTGGTTCTGAGCCAGA TTTTTCGATCTCTCTTTCGTTATGTAAAGTGCCCGAGGGGGGAGTTGCAA AGCCCACAGCGTATTCCAAGTGCAGAGCGTGTAACTGTTGGTTTTGGTGA ATAGAGTCCAACTTCTTCTCATGAACAATTTTACTCACCTGCCGTGTTCA GTCGCTACAGCAGCTCCCAACAAGACAGTAATACCAACGAGTATCGCACC CAAACACGCACCCAAACTTCAGGAGATATTTGAGAGCTTCTTCGGGACGC ACAACCCTTTCGTCGACTTCGGTTTCGGGGACACGATGCCCTTCGCCTCG AGACTTAAGAAGAAGGGGGCCCGAAAGCCGAACCCGGTCACCCGAGACCT CGCCTGTTCCCTGGAAGAGCTGTATAACGGCTGTACCAAGGCGTTCAAGG TCACTCGAAAGGCGAGAGATACGCGACAATATTTTCTCGGGGTAAATGGG GCTAAATTACTCTATCTTTTGGCAATGAGCACATATCATAAAGGCAAGAG ATACAGGCGGGTGCACCTACCGAATTGATCTATCAGAGGATAGATAGGAA GCTACCCGAGCCCTTTTTAAAAGTCGCATGCAGGTCGAGGGGTAGAGTGC TTGCCTTACGTGTTTTTTTTGCTCGCAATACACCAACAACGCTCGCACCA AGCTCCCGACGCACGTGACCGAAGGTGTAGTTTCCTGAAAGCATCGACGA CACCAATAAACTGCGACAAACGCAGAGACTCATAACCGGGGCGTCTAAAT ACACTTCGTAGGCCACAACGTGTGTGTCTATACCGTTGGTCTGCGAAACA TATCAGAGACTGAACGAGGCCGGGGAGCTGGCGGAGGCGTCGACGCAGCT GACGGTCGCGGTCAAGCCGGGATGGAAAAAAGGAACCAAGATAACCTTTC CCGGGGAGGGTGACGAGGGGGCCGGGGTGCTCCCCGCTGACGTTGTGCTT GTAGTTGCGGAAAGGTGCAGTTTGCCTGTGACACATTGTGGTCTGTTGTG TTGTACAGTGTTGCTCTTTACCTTTTCCAAAGCCAAATGCATCGAGTTCA CGACCCACCCCCAACCTCATGCATGTATGCGTCGGGTTGCGCCGTGGCAA GGAATGAACTGGTACTGTCAACTTTTCAGTAATGTGCAAAGGCGGCACAG TAGCGGGAAAATGGGGGTAATGTAGTTGGCCCTCAACGACGCCGGTAGAA CTACGCCGGTGAACCTGTAAAGTGCCGGTGGAATTGCTGGTCGCAGACTG ATTGACCGAGACATTCTGTAGTTTTGAACAGCGCCGGTCCCCCTGAATAG CGCCTTTCGATTCGCCGGGCACACACTGGCGTTTTTGAGGGCCCTTTACT GCAGCAGATTCCGATTATTTTCCGCGTTGGGTACACCACTCGGTTACATG TTACACGTAAACAGATCCTGAGAGAGTGGGTGGGCCGATGTGAATGAATG AGTTTTAATTTTTTTTCACTCTGACATATTCATTGTCACATTCTTTATGA TCGTCGACGCAGGCCTCACGAGTTCTTCTCTCGCGAAGGAAACGACTTGA TCTACACGTCGATGATGTCGTTGGCCGACGCTTTGACGGACTGCATCATT GAGGTGTGTGCGTTACCCCGGGGGAATGCGTCATATTTCATTGAGCCCGC CCATGGACTGAGCAGAAAAGAACCACGATCGTAGTAGCACTAGCCGGAAA CATCAATCACGCTTTCTAGAGTATGCACAAGCGCTCGTGTTGTTGTTTGC AAACGACGCACGTCGCTTCCCATAACAAAAATTCTCATACAGACACGATT GTCCTGTCACTCTGCTCCTGTGATACGTAAATTAACACGCACGTCGCCGG AAATCAACCTAAGAGCATACTTCGATCATCAGCAAAAAGACTACGTGAAT ATCCTGCTCTTGATCAACACCTTGGTGTTTTTTCGTTCTTGCGTCTCAGG TCCCGACTCTGGACGGGCGCGTGCTGCGGCTGCCGTGCCCGGAGGTCGTG AGCCCCGGCTACGAGCGGCGCCTAGAGGGGGAGGGCATGCCCATCAGCAA AAACCCGGGGTCCCGAGGCGACCTGCTGATTCGTTTCAAGCTTGTCTTCC CTGCATTCCTGCCTCACGCCAGCAAGGTCAGGGGAAGTAGTTGGTTTATG GTGCAACTACCTGTATCCACTGAAAGGCTCTCCGACATGTGCTTGACGTT AAACCAATAGCAGCATGCGAAATTTCACAAGCGTTCAACATTTTGTTGTT TAGACTACCCTGATAGCGACAGTGTAAGCCGATTCTACGATCACCCCATT TCGACCATACCGTTGAGGTTGCGAAAAAGGCCATCTCGCGGGATGACCGT AGCAGGTGAATCTCTTAGTCCGCCATCGAAACCACGCGGGGTGCTCACTG CCTACAACTCCGCCGCTGCCCCTTGTGTTGGACTTTGCCGAAGAAACTGA GTACAGCAAGAAACTGTCGTGATGTTGTACTCTTTGCTCTTTGCCTTGCA CTATGAAGTGCTCGTAGTAGCGCCTATCTCCTCTTTAATTCGTAGACTGG GCGACGTGTGTGAGCATACCTACCTCTCTCGCTCATTTTTTGTAGTGGAA GGGCCTGCAGAACGCTTCTTCGACCCAAGCCGCAGCACCCAACAAGAAGA CGAACGCTTCAAGAAGGGCTTTATCCCAGAGTGCTTACGATGCCGACGGC TATTGCCTGAGGATGCATCTACATGTGCGTGTCGCGTGTTCCTCGCGCCC CTAAAAAATGAGTCCATACCTCAATTTCTTCACCTACCCATGAAACCAAC TTCACACGGTACCCATACCGCGTATCCTCCGCGGTTGTTCAGGTCATTTT AAGGAGGCTCCTCTCCCCAGAGATCAACATGAAAGGCGATGGTGCAGCGG TGGATGCGGAGGGAGGCGACGAAGACCCTACGAGCGGCGACAGCGGTGAA AATCCCAAGGGAGACCCAGAGGGGGAGGCTGCCTTGCAGACGGGGTTGGC GGGGAAGGCATCATCACTAGCATCATCCGACATTGCGGGAATAGCGTGCC AGGAATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10078:1837..5944-

>mRNA_Ecto-sp13_S_contig10078.107.1 ID=mRNA_Ecto-sp13_S_contig10078.107.1|Name=mRNA_Ecto-sp13_S_contig10078.107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10078:1837..5944- (Ectocarpus species13 EcNAP12_S_4_19m)
ACTGAAGCGTCGAAGATTTTTCAAAACATTGGGGAGGCCTACGACGTGCT
GAGCGACAAGAAAAACCGGGCAATCTACGACCAATACGGCGCAGAAGGTC
TCCGTGAGGGAGTTCCTGGACAAGATGGGAGAAAGCCGGAGGGCTATACC
TATAAGCAGAACGGGCAGGAGATATTTGAGAGCTTCTTCGGGACGCACAA
CCCTTTCGTCGACTTCGGTTTCGGGGACACGATGCCCTTCGCCTCGAGAC
TTAAGAAGAAGGGGGCCCGAAAGCCGAACCCGGTCACCCGAGACCTCGCC
TGTTCCCTGGAAGAGCTGTATAACGGCTGTACCAAGGCGTTCAAGGTCAC
TCGAAAGGCGAGAGATACGCGACAATATTTTCTCGGGAGACTGAACGAGG
CCGGGGAGCTGGCGGAGGCGTCGACGCAGCTGACGGTCGCGGTCAAGCCG
GGATGGAAAAAAGGAACCAAGATAACCTTTCCCGGGGAGGGTGACGAGGG
GGCCGGGGTGCTCCCCGCTGACGTTGTGCTTGTAGTTGCGGAAAGGCCTC
ACGAGTTCTTCTCTCGCGAAGGAAACGACTTGATCTACACGTCGATGATG
TCGTTGGCCGACGCTTTGACGGACTGCATCATTGAGGTCCCGACTCTGGA
CGGGCGCGTGCTGCGGCTGCCGTGCCCGGAGGTCGTGAGCCCCGGCTACG
AGCGGCGCCTAGAGGGGGAGGGCATGCCCATCAGCAAAAACCCGGGGTCC
CGAGGCGACCTGCTGATTCGTTTCAAGCTTGTCTTCCCTGCATTCCTGCC
TCACGCCAGCAAGGTCATTTTAAGGAGGCTCCTCTCCCCAGAGATCAACA
TGAAAGGCGATGGTGCAGCGGTGGATGCGGAGGGAGGCGACGAAGACCCT
ACGAGCGGCGACAGCGGTGAAAATCCCAAGGGAGACCCAGAGGGGGAGGC
TGCCTTGCAGACGGGGTTGGCGGGGAAGGCATCATCACTAGCATCATCCG
ACATTGCGGGAATAGCGTGCCAGGAATAG
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