prot_Ecto-sp13_S_contig1101.894.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1101.894.1
Unique Nameprot_Ecto-sp13_S_contig1101.894.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length136
Homology
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: D7FSN0_ECTSI (Mitochondrial import inner membrane translocase subunit TIM16 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSN0_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 8.180e-62
Identity = 116/135 (85.93%), Postives = 120/135 (88.89%), Query Frame = 0
Query:    1 FICCWTHRGADARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEAALKAKAXXXXXXXXXXXXXAKTRPAAGGARRPSANRRR 135
            F+  ++    +ARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEAALKAKA     XXXXX   AK RPAAGGARRPSANRRR
Sbjct:   24 FVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEAALKAKAAAGGKXXXXX---AKARPAAGGARRPSANRRR 155          
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: A0A835YVS4_9STRA (Mitochondrial import inner membrane translocase subunit TIM16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.120e-26
Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 FICCWTHRGADARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAK 91
            F+  ++    +ARTGT +  K+M+RTSK+ST EA+Q+LNL K EM P  I Q++ +YF  NDP+KGGSFYLQSKVFRA+E+L E L L AK
Sbjct:   24 FVAAYSQAVQNARTGTQQQVKSMTRTSKMSTAEALQVLNLSKAEMDPTRISQQFARYFESNDPNKGGSFYLQSKVFRARESLHETLELAAK 114          
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: A0A7S3V4X6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4X6_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.320e-16
Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 0
Query:   11 DARTGTLESAKAMSR----TSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDE 84
            +AR G +++AKA S       K+S  EAMQ+LNL KG++ P  +++++D+YF  N  +KGGSFYLQSK++RAKE LDE
Sbjct:   35 NARKGGVDAAKANSEGIFGKKKISVDEAMQVLNLVKGDVSPKAVQKQFDRYFATNAVEKGGSFYLQSKIYRAKEQLDE 112          
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: G3TKX0_LOXAF (Presequence translocase associated motor 16 n=2 Tax=Loxodonta africana TaxID=9785 RepID=G3TKX0_LOXAF)

HSP 1 Score: 74.3 bits (181), Expect = 1.860e-14
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 0
Query:   10 ADARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQ 92
            ADAR  T   + A S  S LS  EA QILN+ K  + P+ I++ Y+  F +ND   GGSFYLQSKV RAKE LDE+L +QA++
Sbjct:   35 ADARGRTSHRSAAASNLSGLSLQEAQQILNVSK--LSPEEIQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQE 115          
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: A0A6V2QTH1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2QTH1_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.740e-14
Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    9 GADARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDE 84
            GA A +G    A +M   +++S  EA+Q+LNL +GE+  + IK++YD+YF  N  +KGGSFYLQSK++RAKE LDE
Sbjct:   40 GAQAASGP---AGSMLGKARISRDEALQVLNLTEGEVTVESIKKQYDKYFAANAIEKGGSFYLQSKIYRAKELLDE 112          
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: A0A8C8SS45_9SAUR (Presequence translocase associated motor 16 n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8SS45_9SAUR)

HSP 1 Score: 73.9 bits (180), Expect = 2.760e-14
Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 0
Query:   10 ADARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQA 90
            ADAR      + A SR S +S  EA QILN+ K  + P+ I++ YD  F +ND   GGSFYLQSKV RAKE LDE+L ++A
Sbjct:   35 ADARGQARSQSAAASRISGISLQEAQQILNVSK--LSPEEIQKNYDHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIEA 113          
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: A0A1D2MJN7_ORCCI (Mitochondrial import inner membrane translocase subunit tim16-B n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MJN7_ORCCI)

HSP 1 Score: 73.6 bits (179), Expect = 3.360e-14
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    7 HRGADARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQ 89
            HR  +A  GT       S+   +S  EA QILN+   E  PD +++R++Q F IND  KGGSFY+QSKV+RAKE LDE L ++
Sbjct:   43 HRNCNANEGT-------SKRHGISVEEARQILNMGPEESSPDDVQKRFEQLFKINDTKKGGSFYIQSKVYRAKERLDEHLRIE 118          
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: F6ZIB8_ORNAN (Presequence translocase associated motor 16 n=48 Tax=Mammalia TaxID=40674 RepID=F6ZIB8_ORNAN)

HSP 1 Score: 73.6 bits (179), Expect = 3.710e-14
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 0
Query:   10 ADARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEA 97
            ADAR  T   + A S  S LS  EA QILN+ K  + P+ I++ Y+  F +ND   GGSFYLQSKV RAKE L+E+L +Q ++ +E+A
Sbjct:   35 ADARGRTGHQSAAASNLSGLSLQEAQQILNVSK--LSPEEIQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLEEELKIQTQEETEQA 120          
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: A0A7S1UAM3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAM3_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.990e-14
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   11 DARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEA 97
            +AR G  ++A    R  K+   EA+ ILNL+K E   + I QR+D  + +NDP +GGSFYLQSKVFRAKE L+  +    K+AS+ A
Sbjct:   28 NARKGGGQAATQAVRRLKMQESEALSILNLKKPEASTEAIAQRFDHLYKVNDPAEGGSFYLQSKVFRAKECLEFHMKEAVKEASKSA 114          
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Match: A0A023FNQ3_AMBCJ (Putative mitochondrial import inner membrane translocase subunit tim16 n=4 Tax=Amblyomma TaxID=6942 RepID=A0A023FNQ3_AMBCJ)

HSP 1 Score: 73.2 bits (178), Expect = 6.060e-14
Identity = 43/85 (50.59%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    8 RGADARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQ 92
            R A A  G      A S    +S  EAMQILN+ K  + P+L+++ Y   F +ND  KGGSFYLQSKV+RAKE LDE+L LQ +Q
Sbjct:   36 RQAGAGRGDSTQRAAASTKLGMSVQEAMQILNVDK--VDPELMEKNYKHLFEVNDKSKGGSFYLQSKVYRAKERLDEELKLQEEQ 118          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1101.894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSN0_ECTSI8.180e-6285.93Mitochondrial import inner membrane translocase su... [more]
A0A835YVS4_9STRA6.120e-2657.14Mitochondrial import inner membrane translocase su... [more]
A0A7S3V4X6_9STRA2.320e-1651.28Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
G3TKX0_LOXAF1.860e-1451.81Presequence translocase associated motor 16 n=2 Ta... [more]
A0A6V2QTH1_9STRA2.740e-1451.32Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8C8SS45_9SAUR2.760e-1451.85Presequence translocase associated motor 16 n=1 Ta... [more]
A0A1D2MJN7_ORCCI3.360e-1448.19Mitochondrial import inner membrane translocase su... [more]
F6ZIB8_ORNAN3.710e-1448.86Presequence translocase associated motor 16 n=48 T... [more]
A0A7S1UAM3_9STRA3.990e-1447.13Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A023FNQ3_AMBCJ6.060e-1450.59Putative mitochondrial import inner membrane trans... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110coord: 29..91
e-value: 1.4E-23
score: 84.0
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 27..85
NoneNo IPR availablePFAMPF03656Pam16coord: 10..97
e-value: 1.4E-22
score: 80.0
NoneNo IPR availablePANTHERPTHR12388:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM16coord: 20..97
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 20..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1101contigEcto-sp13_S_contig1101:16307..17948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1101.894.1mRNA_Ecto-sp13_S_contig1101.894.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1101 16307..17948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1101.894.1 ID=prot_Ecto-sp13_S_contig1101.894.1|Name=mRNA_Ecto-sp13_S_contig1101.894.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
FICCWTHRGADARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLI
KQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEAALK
AKAAAGGKGGAGGAGGAKTRPAAGGARRPSANRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf
IPR005341Tim16