mRNA_Ecto-sp13_S_contig11009.893.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: D7FQ82_ECTSI (3-ketoacyl-(Acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ82_ECTSI) HSP 1 Score: 441 bits (1134), Expect = 1.730e-149 Identity = 235/238 (98.74%), Postives = 237/238 (99.58%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAIGA 715
GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKA AVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVF+VSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGG+AIGA
Sbjct: 55 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKAAAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 292
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: A0A835YXE5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE5_9STRA) HSP 1 Score: 319 bits (818), Expect = 1.420e-102 Identity = 164/237 (69.20%), Postives = 194/237 (81.86%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAIG 712
G+SRG+GAAIA LA GC V++NYAASSGAA+ VV I+ GG+A A++AD SK +V+ +F A AFP + +EV+VNNAGITRDTL +RMKPDQWQ VIDLNL+GVF+ SQAA K MLK+R GRI+NISS+VG IGNPGQANYAAAK GVI MT +M +EFA+RGVTVNAVCPGFIESDMTADL DAIK MIP+ RLGK E+AG+V ++AT+ SA YITG TF VDGGIAIG
Sbjct: 8 GSSRGIGAAIAASLAEKGCKVVINYAASSGAADAVVADIKAKGGEAVAIQADCSKLADVEAMFKGAVEAFPGDNVEVLVNNAGITRDTLVLRMKPDQWQDVIDLNLTGVFYCSQAAAKTMLKKRAGRIVNISSVVGQIGNPGQANYAAAKGGVIAMTRTMGKEFASRGVTVNAVCPGFIESDMTADLQLDAIKAMIPMARLGKASEVAGLVTYLATDPSADYITGHTFNVDGGIAIG 244
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: A0A2V3ICR5_9FLOR (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICR5_9FLOR) HSP 1 Score: 298 bits (763), Expect = 1.730e-93 Identity = 157/238 (65.97%), Postives = 195/238 (81.93%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAIGA 715
G+SRG+G AIA +L GC+V+VNY +S+ AAEEVV +I+ +GG A AVK +VSK+D+V LF A F +I+VVVNNAGITRDTL +RMK DQWQ VIDLNL+GVF +QAA KLMLKQR GRI+NI+S+VGLIGNPGQ NY AAKAGVIG+TMS A+E A+RG+TVNAV PGFI SDMTA+L D IKKMIP+ R G+P+E+AG+V+++A + S+AYITG TF+VDGGIAIG+
Sbjct: 68 GSSRGIGKAIALELGKHGCNVVVNYTSSADAAEEVVTTIKSSGGDAIAVKGNVSKSDQVDALFKAAKDHFG--RIDVVVNNAGITRDTLMLRMKQDQWQDVIDLNLTGVFLCTQAAAKLMLKQRSGRIVNITSVVGLIGNPGQVNYGAAKAGVIGLTMSAAKECASRGITVNAVAPGFINSDMTANLPVDDIKKMIPMNRFGEPEEVAGLVRYLALDPSSAYITGHTFSVDGGIAIGS 303
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: Q00GM6_KARBR (Plastid beta-ketoacyl-ACP reductase protein n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GM6_KARBR) HSP 1 Score: 295 bits (754), Expect = 9.540e-92 Identity = 161/240 (67.08%), Postives = 189/240 (78.75%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIK---KMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAIG 712
G SRGLG AIA DLA GC +IVNYAAS+ AAEEVV+ I++ GG AV+AD+S + V LF AA AF DE + V+VNNAGITRD LTMRMKP QW VI+ NL+GVF +QAA K+MLK+RKGRIINI+S+VG IGNPGQANYAAAK GVI MTMSMAREF +RG+TVNAV PGFIESDMTA+L Q+ + K IPLGR GKP+E+AG+VK++A + SA YITG VDGGIAIG
Sbjct: 91 GGSRGLGKAIALDLAKEGCKIIVNYAASAAAAEEVVEEIKKLGGDGVAVQADMSTKEGVDGLFKAAAEAF-DEPVGVLVNNAGITRDALTMRMKPAQWTDVINTNLNGVFFAAQAASKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMSMAREFGSRGITVNAVAPGFIESDMTAELPQEIVDLQLKNIPLGRFGKPEEVAGLVKYLALDPSALYITGHCLNVDGGIAIG 329
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: B4VS33_9CYAN (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VS33_9CYAN) HSP 1 Score: 290 bits (743), Expect = 3.180e-91 Identity = 152/236 (64.41%), Postives = 190/236 (80.51%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAI 709
GASRG+G A+A LA G V+VNYA+SSGAA+EVV I EAGG A A++ADVSK DEV+TL + F +++V+VNNAGITRDTL MRMKPD WQ+VIDLNL+GVF ++AA K+MLKQ+ GRIINI+S+ G +GNPGQANY+AAKAGVIG T ++A+E A+RG+TVNAV PGFIE+DMT D+ + I K IPLGR GKP+EIAGMV+F+A + +AAYITGQ F VDGG+ +
Sbjct: 19 GASRGIGRAVAFALAAEGAKVVVNYASSSGAADEVVAKITEAGGDAIALQADVSKLDEVETLVKETKDKFG--RLDVLVNNAGITRDTLLMRMKPDDWQAVIDLNLTGVFFCTRAASKIMLKQKSGRIINIASVAGQMGNPGQANYSAAKAGVIGFTKTVAKELASRGITVNAVAPGFIETDMTKDIKSEDIIKYIPLGRYGKPEEIAGMVRFLAADPAAAYITGQVFNVDGGMVM 252
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: A0A4D9D9L3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9L3_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.210e-90 Identity = 151/238 (63.45%), Postives = 192/238 (80.67%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAIGA 715
GASRG+G A A +LA G V+VNYA+S+ +A VV+ I+ G +A A+KAD+SK +EV+ LF + AAAF D + ++VNNAGIT+D L M MKP+ WQ+VID+NLSGVF+ S+AA +ML+ R+GRIIN++S+VG IGNPGQANYAAAK GV+G+T + A+EFAARGVTVNAVCPGFIESDMT LD D IKK IPLGRLG+ E+AGMV+F+A + +AAYITG +F VDGGIAIG+
Sbjct: 56 GASRGIGKACALELAQHGVKVVVNYASSADSALAVVEEIKALGSEAVAIKADMSKPEEVEALFKETAAAFKDP-VNILVNNAGITKDGLVMTMKPEAWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGRASEVAGMVRFLAVDPAAAYITGHSFDVDGGIAIGS 292
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: R7QE57_CHOCR (Chloroplast 3-oxoacyl-[acyl-carrier protein] reductase orecursor n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE57_CHOCR) HSP 1 Score: 288 bits (736), Expect = 2.980e-90 Identity = 150/238 (63.03%), Postives = 189/238 (79.41%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAIGA 715
G+SRG+G AIA+ L AGC V++NYA+S+ AAE+ V +++ GG A A++ ++S D+V LF A AF +++V+VNNAGITRD L +RMKP QWQ VIDLNL+GVF +QAA KLMLKQR GRI+NI+S+VGLIGN GQ NY AAKAGVIG+TMS ARE A RGVTVNAV PGFI SDMTA L + I +MIP+ RLG+P+E+AG+VK++A + S+AYITG TF+VDGGIAIGA
Sbjct: 13 GSSRGIGRAIAEALGAAGCKVVINYASSAEAAEDAVAKVKQLGGDAVAIRGNMSDPDQVANLFKGAVDAFG--RVDVLVNNAGITRDGLLLRMKPSQWQEVIDLNLTGVFMCTQAAAKLMLKQRSGRIVNIASVVGLIGNAGQVNYGAAKAGVIGLTMSAARECAPRGVTVNAVAPGFINSDMTATLPTEKIAEMIPMKRLGEPEEVAGLVKYLALDPSSAYITGHTFSVDGGIAIGA 248
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: X5CV96_9EUKA (FabG n=2 Tax=Eukaryota TaxID=2759 RepID=X5CV96_9EUKA) HSP 1 Score: 289 bits (739), Expect = 5.270e-90 Identity = 155/240 (64.58%), Postives = 188/240 (78.33%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIK---KMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAIG 712
G SRGLG AIA L GC V+VNYAAS+ AAE+VV+ I+ GG AV+AD+S + + LF A AFPD +EV+VNNAGITRDTL +RMKP+QW+ VI+ NL+GVF+ SQAA K+MLK+RKGRIINI+S+VG IGNPGQANYAAAK GVI MTM+MA+EFA+RGVTVNAV PGFI SDMT +L D I+ K IP+GR GKP+E+AG+VK++A + SA YITG VDGGIAIG
Sbjct: 56 GGSRGLGRAIALKLGSEGCRVVVNYAASAEAAEKVVEEIKGLGGDGVAVQADMSSIEGISALFEATAKAFPDP-VEVLVNNAGITRDTLVLRMKPNQWEDVINTNLNGVFYASQAAAKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMTMAKEFASRGVTVNAVAPGFISSDMTDELPADIIEQVTKSIPVGRFGKPEEVAGLVKYLALDPSADYITGHCINVDGGIAIG 294
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: F0Y3V7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3V7_AURAN) HSP 1 Score: 286 bits (733), Expect = 9.580e-90 Identity = 153/241 (63.49%), Postives = 190/241 (78.84%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKM---IPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAIGA 715
GASRG+G AIA DL GC+V+VNYAAS G A EVV++I+ +GG A AVKAD++ DE+K LF + A F +V+VNNAGIT+D L MRMKP QWQ+VID+NLSGVF+ SQAA M K+R GRIIN+SS+VGL GNPGQANYAAAK GV G+TMS A+EFA RGVTVNAVCPGFI ++M +L +D + K+ IPLGRLG+ DE+AG+V+++A + SAAYITG + T+DGGIAIGA
Sbjct: 12 GASRGIGRAIALDLGAQGCNVVVNYAASEGPALEVVEAIKASGGDAVAVKADMASVDEIKALFKETADHFGG--CDVLVNNAGITKDGLAMRMKPAQWQAVIDVNLSGVFYCSQAAFTQMAKKRAGRIINMSSVVGLFGNPGQANYAAAKGGVCGLTMSNAKEFAGRGVTVNAVCPGFIGTEMANELGEDMLNKVKEAIPLGRLGEADEVAGLVRYLALDKSAAYITGHSMTIDGGIAIGA 250
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Match: A0A7S3QGR3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QGR3_9STRA) HSP 1 Score: 287 bits (735), Expect = 1.890e-89 Identity = 153/241 (63.49%), Postives = 184/241 (76.35%), Query Frame = 2
Query: 2 GASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKATAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQD---AIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGIAIGA 715
GASRGLG AIA DL G V+VNYA S AA E V+ ++ AGG A AV+A+V D++K +FA A ++V++NNAGIT+D L MRMKP QWQ VID+NLSGVF+ +QA KL +K+RKGRIINISS+VG IGNPGQANYAAAK GVIG+TMS A+EF+ RG+TVN +CPGFIESDMTA+L D + K IPLGRLGKP E+AGM F+A +D+A YITG TF VDGGIAIGA
Sbjct: 53 GASRGLGRAIACDLGAKGQKVVVNYAGSVDAANETVEMVKAAGGDAIAVQANVGSPDDIKEMFAVITANEDFGTVDVLINNAGITKDGLVMRMKPKQWQDVIDINLSGVFYTTQAFFKLAMKKRKGRIINISSVVGQIGNPGQANYAAAKGGVIGLTMSNAKEFSTRGITVNCICPGFIESDMTAELSDDYLAEVSKGIPLGRLGKPAEVAGMASFLALDDAADYITGHTFNVDGGIAIGA 293 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11009.893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11009.893.1 >prot_Ecto-sp13_S_contig11009.893.1 ID=prot_Ecto-sp13_S_contig11009.893.1|Name=mRNA_Ecto-sp13_S_contig11009.893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp MRMKPDQWQSVIDLNLSGVFHVSQAACKLMLKQRKGRIINISSIVGLIGNback to top mRNA from alignment at Ecto-sp13_S_contig11009:547..4992+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11009.893.1 ID=mRNA_Ecto-sp13_S_contig11009.893.1|Name=mRNA_Ecto-sp13_S_contig11009.893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4446bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11009:547..4992+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11009:547..4992+ >mRNA_Ecto-sp13_S_contig11009.893.1 ID=mRNA_Ecto-sp13_S_contig11009.893.1|Name=mRNA_Ecto-sp13_S_contig11009.893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11009:547..4992+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |