prot_Ecto-sp13_S_contig11.881.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig11.881.1
Unique Name	prot_Ecto-sp13_S_contig11.881.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	614

Homology

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A6H5KXI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI0_9PHAE)

HSP 1 Score: 923 bits (2386), Expect = 0.000e+0
Identity = 567/621 (91.30%), Postives = 573/621 (92.27%), Query Frame = 0

Query:    1 PLPFQIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGYPPSPSALGPVMGGGPMNKPTSAAAXXXXXXXXXXXXXXXXXXXXXP-RDTMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQQQHQQHTGSVPQHGXXXXXXXXXH--GHMQAREEMASFRLHGSHSSFLPPSAAARAEAAAAHAFVQELKAWDVENPGQGLSFDEPLDYYSEQPXXXXXXXXXXXRG-PSMEFNTRTETSGAGGSNDGTYGTGATGSVTWRPGPGNGQPSAQRAAWAQHGQAGSTIRQXXXXXXXXXXXXXXXXXAHRPPGDATRLLAHNSRVEDVSPRHSDNFSTFSHHEDGTAAPCPDGIDTHTHLSISTGAGQNGDGXYXXXXXXXXXXXXXXSA----AALNEAPNGKMMSPGEAGGTPALMGSSPLLGSNGLLETAFADLKLDGPNPNQNGDGPSMLSGIGGGGPPSASSEALPYGRAGGGTAVDGGGGSEGLAASSVWRADAFGSALGVSVPRTVDEIGSMPMSERKDIMGGGGLGERFMGPLGTTGAGGGTTHVNMGWS 613
            P+  +IFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGYPPSPSALGP MGGGPMNKP SAA XXXXXXXXXXXXXXXXXXXXX  RD MVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQQQHQQHTGSVPQH XXXXXXXXX   G MQAREEMASFRLHGSHSSFLPPSAAARAEAAAAHAFVQELKAWDVENPGQGLSF+EPLDYYSE P XXXXXXXXXX   PSMEFNTRTETSGAGGSN+G+YG G TGSVTWRPGPGNGQPSAQRAAWAQHGQAGSTIRQXXXXXXXXXXX      AH PPGDATRLLAHNSRVEDVSPRHSDNFSTFSHHEDGTAA CPDGIDTHTHLSISTGA QNGDG Y      XXXXXXXX      AALNEAPNGKM SPGEAGGTPALMGSSPLLGSNGLLETAFADLKLDGPNPNQNGDGPSMLSGIGGGGPPSASSEALPYGRAGGGTAVDGGGGSEGLAASSVWRADAFGSALGVSVPRTVDEIGSMPMSERKDIMG  GLGERFM   GTTGAGGGTTHVNMGW+
Sbjct:  153 PMATKIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGYPPSPSALGPGMGGGPMNKPASAAXXXXXXXXXXXXXXXXXXXXXXXXRDNMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQQQHQQHTGSVPQHXXXXXXXXXXXXXGLMQAREEMASFRLHGSHSSFLPPSAAARAEAAAAHAFVQELKAWDVENPGQGLSFEEPLDYYSELPQXXXXXXXXXXXXXPSMEFNTRTETSGAGGSNNGSYGNGVTGSVTWRPGPGNGQPSAQRAAWAQHGQAGSTIRQXXXXXXXXXXX------AHGPPGDATRLLAHNSRVEDVSPRHSDNFSTFSHHEDGTAAACPDGIDTHTHLSISTGAAQNGDGGYHNGHGQXXXXXXXXXXXXXXAALNEAPNGKMTSPGEAGGTPALMGSSPLLGSNGLLETAFADLKLDGPNPNQNGDGPSMLSGIGGGGPPSASSEALPYGRAGGGTAVDGGGGSEGLAASSVWRADAFGSALGVSVPRTVDEIGSMPMSERKDIMGVEGLGERFMESFGTTGAGGGTTHVNMGWN 767

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: D7G4R7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R7_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 1.580e-90
Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 0

Query:    1 PLPFQIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGYPPSPSALGPVMGGGPMNKPTSAAAXXXXXXXXXXXXXXXXXXXXXPRDTMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQ 185
            P+  +IFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPA+MGYPPSPSALGP MGGGPM KPT+AA XXXXXXXXXXXXXXXXXXX  PRDTMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQ
Sbjct:  153 PMATKIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPALMGYPPSPSALGPGMGGGPMIKPTAAAXXXXXXXXXXXXXXXXXXXX--PRDTMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQ 335

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A835ZB24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB24_9STRA)

HSP 1 Score: 129 bits (325), Expect = 7.640e-30
Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 0

Query:    5 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPR 82
            ++FVGGLHYETRD + + YFEQFG V  A+VMFNRETHKSRGFGFVVFES +SA  VLQ+SHHT+NGKVVEVKRAVPR
Sbjct:  152 KVFVGGLHYETRDNAFRTYFEQFGKVLAADVMFNRETHKSRGFGFVVFESADSAARVLQTSHHTINGKVVEVKRAVPR 229

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A836CPN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPN2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.080e-29
Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 0

Query:    5 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPR 82
            ++FVGGLHYETRD++ +AYFEQFGPV  A+VMFNRETHKSRGFGFV FE  ES   VL+ SHHT+ GKVVEVKRAVPR
Sbjct:  136 KLFVGGLHYETRDSTFRAYFEQFGPVLAADVMFNRETHKSRGFGFVTFEHPESVGHVLRVSHHTIGGKVVEVKRAVPR 213

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A8J4W8W6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A8J4W8W6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.480e-26
Identity = 73/144 (50.69%), Postives = 91/144 (63.19%), Query Frame = 0

Query:    5 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQ-------SSTGGS--NPSSP---------------AMMGYPPSPSALGPVMGGGPMNKPTSAAA 124
            +IFVGGLHYET+DA  + YF Q+G V +AEVMFNRET+KSRGFGFV+FESE+S   VLQ  +H ++GK VEVKRAVPR         SS GGS   PS P               ++ G  PS S L  VMG   +++ +SA+A
Sbjct:  122 KIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEDSVELVLQDKNHIIDGKSVEVKRAVPRTDVPPPRSVSSRGGSFSGPSGPGSVGSLDDINATPPVSLSGSMPSSSGLTAVMGSEKLSRASSASA 265

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A421GV64_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GV64_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.300e-25
Identity = 73/144 (50.69%), Postives = 91/144 (63.19%), Query Frame = 0

Query:    5 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQ-------SSTGGS--NPSSP---------------AMMGYPPSPSALGPVMGGGPMNKPTSAAA 124
            +IFVGGLHYET+DA  + YF Q+G V +AEVMFNRET+KSRGFGFV+FESE+S   VLQ  +H ++GK VEVKRAVPR         SS GGS   PS P               ++ G  PS S L  VMG   +++ +SA+A
Sbjct:  122 KIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEDSVELVLQDKNHIIDGKSVEVKRAVPRTDVPPPRSVSSRGGSFSGPSGPGSVGSLDDINATPPVSLSGSMPSSSGLTAVMGSEKLSRASSASA 265

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: W2RJD1_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RJD1_PHYPN)

HSP 1 Score: 114 bits (286), Expect = 5.240e-25
Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 0

Query:    5 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPR 82
            +IFVGGLHYET+DA  + YF Q+G V +AEVMFNRET+KSRGFGFV+FESE S   VLQ  +H ++GK VEVKRAVPR
Sbjct:  122 KIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEASVELVLQDKNHVIDGKSVEVKRAVPR 199

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A6G0WHQ9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHQ9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.010e-24
Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 0

Query:    5 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSP 95
            +IFVGGLHYET+DA  + YF+QFG V +AEVMFNRET+KSRGFGFV+FE+E+S   VLQ   H ++GK VEVKRAVPR  +    SN + P
Sbjct:  104 KIFVGGLHYETKDADFKKYFQQFGKVVSAEVMFNRETNKSRGFGFVIFETEQSVELVLQDRGHVIDGKSVEVKRAVPRTDAPPSSSNSNRP 194

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A6A5AHV8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AHV8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.490e-24
Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 0

Query:    5 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSS 94
            +IFVGGLHYET+DA  + YF Q+G V +AEVMFNRET+KSRGFGFV+FE+E S + VLQ   H ++GK VEVKRAVPR  +    S+ SS
Sbjct:  132 KIFVGGLHYETKDAEFKKYFSQYGKVVSAEVMFNRETNKSRGFGFVIFETEHSVDLVLQDGGHVLDGKSVEVKRAVPRTDAPPPSSSSSS 221

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BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A067BU65_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BU65_SAPPC)

HSP 1 Score: 115 bits (288), Expect = 2.780e-24
Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 0

Query:    5 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPR 82
            +IFVGGLHYET+DA  + YF+QFG V +AEVMFNRET+KSRGFGFV+FE+E S   VLQ   H ++GK VEVKRAVPR
Sbjct:  120 KIFVGGLHYETKDAEFKTYFQQFGKVVSAEVMFNRETNKSRGFGFVIFETEASVELVLQDKTHVIDGKSVEVKRAVPR 197

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXI0_9PHAE	0.000e+0	91.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G4R7_ECTSI	1.580e-90	94.05	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZB24_9STRA	7.640e-30	78.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CPN2_9STRA	1.080e-29	75.64	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A8J4W8W6_9STRA	7.480e-26	50.69	Uncharacterized protein n=2 Tax=Phytophthora kerno...	[more]
A0A421GV64_9STRA	3.300e-25	50.69	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
W2RJD1_PHYPN	5.240e-25	69.23	Uncharacterized protein n=1 Tax=Phytophthora paras...	[more]
A0A6G0WHQ9_9STRA	1.010e-24	62.64	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A6A5AHV8_9STRA	1.490e-24	62.22	Uncharacterized protein (Fragment) n=1 Tax=Aphanom...	[more]
A0A067BU65_SAPPC	2.780e-24	69.23	Uncharacterized protein n=1 Tax=Saprolegnia parasi...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 347..367
None	No IPR available	PANTHER	PTHR11176:SF13	GENE 17190-RELATED	coord: 5..446
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 5..77 e-value: 8.1E-24 score: 95.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 6..74 e-value: 1.4E-17 score: 63.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..81 score: 16.705
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..93 e-value: 7.5E-24 score: 86.2
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 5..446
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig11	contig	Ecto-sp13_S_contig11:62554..64395 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig11.881.1	mRNA_Ecto-sp13_S_contig11.881.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig11 62554..64395 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig11.881.1 ID=prot_Ecto-sp13_S_contig11.881.1|Name=mRNA_Ecto-sp13_S_contig11.881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=614bp
PLPFQIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFV
VFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGY
PPSPSALGPVMGGGPMNKPTSAAAAAAAVAAAAAAGAKRPQRPRPPRDTM
VGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQQQHQQHTGSVPQHGG
GGGKPPQHHGHMQAREEMASFRLHGSHSSFLPPSAAARAEAAAAHAFVQE
LKAWDVENPGQGLSFDEPLDYYSEQPQPQQQQQQQIQRGPSMEFNTRTET
SGAGGSNDGTYGTGATGSVTWRPGPGNGQPSAQRAAWAQHGQAGSTIRQQ
QQQQQQQQQQQQQQQQAHRPPGDATRLLAHNSRVEDVSPRHSDNFSTFSH
HEDGTAAPCPDGIDTHTHLSISTGAGQNGDGGYHNGHGQQQQQQQQQSAA
ALNEAPNGKMMSPGEAGGTPALMGSSPLLGSNGLLETAFADLKLDGPNPN
QNGDGPSMLSGIGGGGPPSASSEALPYGRAGGGTAVDGGGGSEGLAASSV
WRADAFGSALGVSVPRTVDEIGSMPMSERKDIMGGGGLGERFMGPLGTTG
AGGGTTHVNMGWS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR037366	BOULE/DAZ
IPR035979	RBD_domain_sf