mRNA_Ecto-sp13_S_contig11.881.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A6H5KXI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI0_9PHAE) HSP 1 Score: 923 bits (2386), Expect = 0.000e+0 Identity = 567/621 (91.30%), Postives = 573/621 (92.27%), Query Frame = 1
Query: 1 PLPFQIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGYPPSPSALGPVMGGGPMNKPTSAAAXXXXXXXXXXXXXXXXXXXXXP-RDTMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQQQHQQHTGSVPQHGXXXXXXXXXH--GHMQAREEMASFRLHGSHSSFLPPSAAARAEAAAAHAFVQELKAWDVENPGQGLSFDEPLDYYSEQPXXXXXXXXXXXRG-PSMEFNTRTETSGAGGSNDGTYGTGATGSVTWRPGPGNGQPSAQRAAWAQHGQAGSTIRQXXXXXXXXXXXXXXXXXAHRPPGDATRLLAHNSRVEDVSPRHSDNFSTFSHHEDGTAAPCPDGIDTHTHLSISTGAGQNGDGXYXXXXXXXXXXXXXXSA----AALNEAPNGKMMSPGEAGGTPALMGSSPLLGSNGLLETAFADLKLDGPNPNQNGDGPSMLSGIGGGGPPSASSEALPYGRAGGGTAVDGGGGSEGLAASSVWRADAFGSALGVSVPRTVDEIGSMPMSERKDIMGGGGLGERFMGPLGTTGAGGGTTHVNMGWS 1839
P+ +IFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGYPPSPSALGP MGGGPMNKP SAA XXXXXXXXXXXXXXXXXXXXX RD MVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQQQHQQHTGSVPQH XXXXXXXXX G MQAREEMASFRLHGSHSSFLPPSAAARAEAAAAHAFVQELKAWDVENPGQGLSF+EPLDYYSE P XXXXXXXXXX PSMEFNTRTETSGAGGSN+G+YG G TGSVTWRPGPGNGQPSAQRAAWAQHGQAGSTIRQXXXXXXXXXXX AH PPGDATRLLAHNSRVEDVSPRHSDNFSTFSHHEDGTAA CPDGIDTHTHLSISTGA QNGDG Y XXXXXXXX AALNEAPNGKM SPGEAGGTPALMGSSPLLGSNGLLETAFADLKLDGPNPNQNGDGPSMLSGIGGGGPPSASSEALPYGRAGGGTAVDGGGGSEGLAASSVWRADAFGSALGVSVPRTVDEIGSMPMSERKDIMG GLGERFM GTTGAGGGTTHVNMGW+
Sbjct: 153 PMATKIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGYPPSPSALGPGMGGGPMNKPASAAXXXXXXXXXXXXXXXXXXXXXXXXRDNMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQQQHQQHTGSVPQHXXXXXXXXXXXXXGLMQAREEMASFRLHGSHSSFLPPSAAARAEAAAAHAFVQELKAWDVENPGQGLSFEEPLDYYSELPQXXXXXXXXXXXXXPSMEFNTRTETSGAGGSNNGSYGNGVTGSVTWRPGPGNGQPSAQRAAWAQHGQAGSTIRQXXXXXXXXXXX------AHGPPGDATRLLAHNSRVEDVSPRHSDNFSTFSHHEDGTAAACPDGIDTHTHLSISTGAAQNGDGGYHNGHGQXXXXXXXXXXXXXXAALNEAPNGKMTSPGEAGGTPALMGSSPLLGSNGLLETAFADLKLDGPNPNQNGDGPSMLSGIGGGGPPSASSEALPYGRAGGGTAVDGGGGSEGLAASSVWRADAFGSALGVSVPRTVDEIGSMPMSERKDIMGVEGLGERFMESFGTTGAGGGTTHVNMGWN 767
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: D7G4R7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R7_ECTSI) HSP 1 Score: 294 bits (752), Expect = 1.580e-90 Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 1
Query: 1 PLPFQIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGYPPSPSALGPVMGGGPMNKPTSAAAXXXXXXXXXXXXXXXXXXXXXPRDTMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQ 555
P+ +IFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPA+MGYPPSPSALGP MGGGPM KPT+AA XXXXXXXXXXXXXXXXXXX PRDTMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQ
Sbjct: 153 PMATKIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPALMGYPPSPSALGPGMGGGPMIKPTAAAXXXXXXXXXXXXXXXXXXXX--PRDTMVGPNNGAVPGTPPQRPRYPPTTSYAAVLRFGAGRQ 335
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A835ZB24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB24_9STRA) HSP 1 Score: 129 bits (325), Expect = 7.640e-30 Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 1
Query: 13 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPR 246
++FVGGLHYETRD + + YFEQFG V A+VMFNRETHKSRGFGFVVFES +SA VLQ+SHHT+NGKVVEVKRAVPR
Sbjct: 152 KVFVGGLHYETRDNAFRTYFEQFGKVLAADVMFNRETHKSRGFGFVVFESADSAARVLQTSHHTINGKVVEVKRAVPR 229
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A836CPN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPN2_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.080e-29 Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 1
Query: 13 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPR 246
++FVGGLHYETRD++ +AYFEQFGPV A+VMFNRETHKSRGFGFV FE ES VL+ SHHT+ GKVVEVKRAVPR
Sbjct: 136 KLFVGGLHYETRDSTFRAYFEQFGPVLAADVMFNRETHKSRGFGFVTFEHPESVGHVLRVSHHTIGGKVVEVKRAVPR 213
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A8J4W8W6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A8J4W8W6_9STRA) HSP 1 Score: 118 bits (296), Expect = 7.480e-26 Identity = 73/144 (50.69%), Postives = 91/144 (63.19%), Query Frame = 1
Query: 13 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQ-------SSTGGS--NPSSP---------------AMMGYPPSPSALGPVMGGGPMNKPTSAAA 372
+IFVGGLHYET+DA + YF Q+G V +AEVMFNRET+KSRGFGFV+FESE+S VLQ +H ++GK VEVKRAVPR SS GGS PS P ++ G PS S L VMG +++ +SA+A
Sbjct: 122 KIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEDSVELVLQDKNHIIDGKSVEVKRAVPRTDVPPPRSVSSRGGSFSGPSGPGSVGSLDDINATPPVSLSGSMPSSSGLTAVMGSEKLSRASSASA 265
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A421GV64_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GV64_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.300e-25 Identity = 73/144 (50.69%), Postives = 91/144 (63.19%), Query Frame = 1
Query: 13 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQ-------SSTGGS--NPSSP---------------AMMGYPPSPSALGPVMGGGPMNKPTSAAA 372
+IFVGGLHYET+DA + YF Q+G V +AEVMFNRET+KSRGFGFV+FESE+S VLQ +H ++GK VEVKRAVPR SS GGS PS P ++ G PS S L VMG +++ +SA+A
Sbjct: 122 KIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEDSVELVLQDKNHIIDGKSVEVKRAVPRTDVPPPRSVSSRGGSFSGPSGPGSVGSLDDINATPPVSLSGSMPSSSGLTAVMGSEKLSRASSASA 265
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: W2RJD1_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RJD1_PHYPN) HSP 1 Score: 114 bits (286), Expect = 5.240e-25 Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 13 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPR 246
+IFVGGLHYET+DA + YF Q+G V +AEVMFNRET+KSRGFGFV+FESE S VLQ +H ++GK VEVKRAVPR
Sbjct: 122 KIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEASVELVLQDKNHVIDGKSVEVKRAVPR 199
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A6G0WHQ9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHQ9_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.010e-24 Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 13 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSP 285
+IFVGGLHYET+DA + YF+QFG V +AEVMFNRET+KSRGFGFV+FE+E+S VLQ H ++GK VEVKRAVPR + SN + P
Sbjct: 104 KIFVGGLHYETKDADFKKYFQQFGKVVSAEVMFNRETNKSRGFGFVIFETEQSVELVLQDRGHVIDGKSVEVKRAVPRTDAPPSSSNSNRP 194
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A6A5AHV8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AHV8_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.490e-24 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 13 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSS 282
+IFVGGLHYET+DA + YF Q+G V +AEVMFNRET+KSRGFGFV+FE+E S + VLQ H ++GK VEVKRAVPR + S+ SS
Sbjct: 132 KIFVGGLHYETKDAEFKKYFSQYGKVVSAEVMFNRETNKSRGFGFVIFETEHSVDLVLQDGGHVLDGKSVEVKRAVPRTDAPPPSSSSSS 221
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Match: A0A067BU65_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BU65_SAPPC) HSP 1 Score: 115 bits (288), Expect = 2.780e-24 Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 13 QIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPR 246
+IFVGGLHYET+DA + YF+QFG V +AEVMFNRET+KSRGFGFV+FE+E S VLQ H ++GK VEVKRAVPR
Sbjct: 120 KIFVGGLHYETKDAEFKTYFQQFGKVVSAEVMFNRETNKSRGFGFVIFETEASVELVLQDKTHVIDGKSVEVKRAVPR 197 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11.881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11.881.1 >prot_Ecto-sp13_S_contig11.881.1 ID=prot_Ecto-sp13_S_contig11.881.1|Name=mRNA_Ecto-sp13_S_contig11.881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=614bp PLPFQIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVback to top mRNA from alignment at Ecto-sp13_S_contig11:62554..64395- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11.881.1 ID=mRNA_Ecto-sp13_S_contig11.881.1|Name=mRNA_Ecto-sp13_S_contig11.881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1842bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:62554..64395- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11:62554..64395- >mRNA_Ecto-sp13_S_contig11.881.1 ID=mRNA_Ecto-sp13_S_contig11.881.1|Name=mRNA_Ecto-sp13_S_contig11.881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1842bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:62554..64395- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |