mRNA_Ecto-sp13_S_contig11.880.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11.880.1
Unique NamemRNA_Ecto-sp13_S_contig11.880.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: D7G4R6_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R6_ECTSI)

HSP 1 Score: 631 bits (1628), Expect = 1.060e-227
Identity = 339/345 (98.26%), Postives = 341/345 (98.84%), Query Frame = 1
Query:    1 MGFSSILSIALLLAPGSEAFLSARGAMPLASSRAVASPAAFRSTSLAPRQQQCNTKSLKMSTAAAPVVAGGSTAAPVPAAASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK 1035
            MGFSSILSIAL+LAPGSEAFLSARGAMPLASSRAVASPAAFRSTS+APRQQ CNTKSLKMSTAAAPVVAGGST APV A ASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK
Sbjct:    1 MGFSSILSIALVLAPGSEAFLSARGAMPLASSRAVASPAAFRSTSMAPRQQ-CNTKSLKMSTAAAPVVAGGSTTAPVSAVASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK 344          
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: A0A7S2UWW2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWW2_9STRA)

HSP 1 Score: 326 bits (836), Expect = 9.080e-108
Identity = 167/263 (63.50%), Postives = 198/263 (75.29%), Query Frame = 1
Query:  247 APSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK 1035
            AP +KPPP +Y+ AV  G  KASGS AK+F +GI+SGCHIGFGA LA+SIGG CP + A NPG+QK+I GAFGLPFGL MT+  GGELFTGNTA+VTAAV+EGK +   L KNW+ SYLGNFVGSL+L +LA + G + +   A+ IATAK SL F  AF RGILCNWLVCMAV+M+   S   GK  A++ PISAFVALGLDHSVANMF+IPLGM  GA +T  Q  L NL+PVTLGNIVGGA+ V   +   FG  F KK+
Sbjct:   49 APELKPPPALYEGAVAAGAAKASGSWAKIFKLGIVSGCHIGFGAYLAISIGGACPQIAAANPGVQKMILGAFGLPFGLIMTLATGGELFTGNTALVTAAVLEGKTTKKDLAKNWISSYLGNFVGSLILAYLAFKSGTLGDLPGAVNIATAKVSLPFTVAFVRGILCNWLVCMAVYMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFIIPLGMLRGADITIGQMFLKNLIPVTLGNIVGGALCVMAPFGTTFGKWFQKKE 311          
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: A0A6U5HVT6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HVT6_9STRA)

HSP 1 Score: 326 bits (836), Expect = 1.960e-107
Identity = 165/261 (63.22%), Postives = 199/261 (76.25%), Query Frame = 1
Query:  250 PSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKK 1032
            P++KPP  +YQ AV  G  KAS    K+F +GI+SG HI FGA LAV++GG CPGL ++NPGLQKIIFG+FGLPFGL MT++ GGELFTGNTA+VTAA  EGK S+  L+KNW  SYLGNFVGSLLL +LA  GG + +  ++  IATAK S+ F+ AF RGILCNWLVCMAV+M+   S   GK  A++ PISAFVALGLDHS+ANMFLIPLGM  GA VT +Q  + NL+PVTLGNIVGGA+ V G +  AFG+ F KK
Sbjct:   72 PALKPPASLYQGAVAAGAAKASAPFGKIFKLGIVSGAHIAFGAFLAVTVGGACPGLASSNPGLQKIIFGSFGLPFGLIMTLITGGELFTGNTALVTAAYAEGKTSMSDLIKNWSASYLGNFVGSLLLAYLAYTGGTLGSAPASAAIATAKCSMPFLTAFVRGILCNWLVCMAVYMASGISTMGGKMVAVYFPISAFVALGLDHSIANMFLIPLGMMRGAEVTIAQMFMKNLIPVTLGNIVGGALCVAGGFGSAFGNWFEKK 332          
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: B8BXN4_THAPS (Formate/nitrite transporter family member n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXN4_THAPS)

HSP 1 Score: 318 bits (815), Expect = 3.570e-105
Identity = 161/261 (61.69%), Postives = 195/261 (74.71%), Query Frame = 1
Query:  250 PSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKK 1032
            P +K PP +Y+ AV  G  KAS S  K+F +GI +GCHIGFG+ LA+++GG CP +   NPGLQKIIFGAFGLPFGL MT+V G ELFTGNTA+VTAAV+EGK +   L+KNWV SY GN VGSL+L +LA + G + N  +++ IATAK SL F  AF RGILCNWLVCMAV+M+   +  AGK  A++ PISAFVALGLDHSVANMF+IPLGM  GA +T   F+  NL+PVTLGNIVGGA+ V G+Y  AFG  F  K
Sbjct:    9 PDLKAPPAIYEGAVAAGAAKASASWEKIFKLGIAAGCHIGFGSYLAITVGGACPQIAEANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAAVMEGKTTTKDLIKNWVASYAGNVVGSLILAYLAFKSGTLGNAPASVAIATAKCSLPFETAFVRGILCNWLVCMAVYMASGCASLAGKMVAVWFPISAFVALGLDHSVANMFIIPLGMMRGAQITVGDFITKNLIPVTLGNIVGGALCVMGIYGSAFGKWFKSK 269          
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: A0A835YP49_9STRA (Nitrite transporter NAR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP49_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.070e-104
Identity = 162/250 (64.80%), Postives = 198/250 (79.20%), Query Frame = 1
Query:  268 PQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGS 1017
            P +YQNAV++G KKA+  + K+  +GI+SGCHIGFGALLAV++GGN P + A NPG QK + GA GLPFGLFMT+VGGGELFTGNTA+VTAA++E +AS+ GLLK+W  SYLGNF+GSLLL  +AV  G++  P +  G+A AK ++  VQ+F RG+LCNWLVCMAV+MS  ASDA GK  AIFLPISAFVALG DH VANMFL+P  M +GA +   +FL  +LLPVTLGNIVGGA AV G+YS AFGS
Sbjct:   77 PALYQNAVELGAKKAAMPINKILTLGILSGCHIGFGALLAVTVGGNVPEMAAANPGAQKFLLGAVGLPFGLFMTLVGGGELFTGNTALVTAALLEKRASLKGLLKSWSISYLGNFLGSLLLAAIAVNAGIIAVP-ALKGVACAKAAVYPVQSFFRGLLCNWLVCMAVYMSAGASDAGGKLAAIFLPISAFVALGTDHCVANMFLLPAAMMVGADIGLGRFLFGHLLPVTLGNIVGGAAAVAGMYSLAFGS 325          
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: A0A8J9ST54_9CHLO (Probable formate transporter 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9ST54_9CHLO)

HSP 1 Score: 318 bits (814), Expect = 4.180e-104
Identity = 158/257 (61.48%), Postives = 200/257 (77.82%), Query Frame = 1
Query:  250 PSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSL 1020
            P + PPP  +  A+  GQ KA+ S++K F MGI+ G  IGFG+ LA+S+GG CPGL +TNPGLQKI++GAFGLPFGL + ++ G ELFTGNTA+VTA+V+EGKAS+  L KNW FSYLGNF GSLL+V L V  G++    + + +A AKTSLTF QAF+RGILCNWLV  AV+M+ +AS A GK  A++ PISAFVALGL+HSVANMF++PLG+ALGA V+++ FL ANLLPVTLGNIVGGAV +   Y+  FG +
Sbjct:   73 PELSPPPAAFAKAIAAGQSKAALSISKTFFMGILGGAFIGFGSFLALSVGGACPGLASTNPGLQKIVYGAFGLPFGLLLVLMCGAELFTGNTALVTASVLEGKASLEQLAKNWFFSYLGNFAGSLLMVTLVVSTGLLATAAAPLNVAVAKTSLTFAQAFSRGILCNWLVSAAVYMANAASSAPGKAVAVWFPISAFVALGLEHSVANMFMVPLGIALGAKVSFATFLTANLLPVTLGNIVGGAVCIALAYAACFGKM 329          
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: A0A7S0GAY3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAY3_9STRA)

HSP 1 Score: 315 bits (806), Expect = 3.070e-103
Identity = 178/312 (57.05%), Postives = 209/312 (66.99%), Query Frame = 1
Query:  100 AVASPAAFRSTSLAPRQQQCNTKSLKMSTAAAPVVAGGSTAAPVPAAASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK 1035
            A A  AAF S+ +AP        ++KMS        GG+ A P         +K PP +Y  AV  G  KA     K+F +GI+SG HI FGA LA+++GG CP + A NPGLQKIIFGAFGLPFGL MT+V G ELFTGNTA+VTAA +EGK +   L+K+WV SYLGNFVGSLLL +LA  GG + N  +A  IATAK SL F  AF RGILCNWLVCMAV M+   S   GK  A++ PISAFVALGLDHSVANMFLIPLGM  GA +T +   + NL+PVTLGNIVGGAV V   Y   FGS F KK+
Sbjct:   15 AAAPAAAFASSVIAPSATFARATAIKMS--------GGADAVP--------ELKAPPALYAGAVAAGTAKALAPAEKIFTLGIVSGAHIAFGAFLALAVGGACPEIAAANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAARMEGKITTKDLIKSWVSSYLGNFVGSLLLAYLAFNGGTLGNGPAAAAIATAKCSLPFKVAFIRGILCNWLVCMAVLMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFLIPLGMMRGAEITIADMFIKNLIPVTLGNIVGGAVCVMAPYGKTFGSWFSKKE 310          
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: A0A448ZQ46_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ46_9STRA)

HSP 1 Score: 312 bits (800), Expect = 2.740e-102
Identity = 164/265 (61.89%), Postives = 197/265 (74.34%), Query Frame = 1
Query:  238 AASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKK 1032
            A +AP +KPPP +YQ AV  G  KAS +   +F +GI+SGCHI FGA LA+++GG C G+ A NPGLQKIIFG+FGLPFGL MT+V GGELFTGNTA+VTAA  EGK S   L+KNWV SY GN VGSLLL +LA + G +    ++  IATAK SL +  AF RGILCNWLVCMAV+M+   +  AGK  A++ PISAFVALGLDHSVANMF+IPLGM  GA +T   FL+ NL+PVTLGNIVGGA+ V   +   FGS +GKK
Sbjct:   48 AGTAPELKPPPSLYQGAVAAGVGKASKTWGDIFKLGIVSGCHIAFGAYLAITVGGACSGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKISGKDLIKNWVSSYTGNLVGSLLLAYLAYKSGTLAASPASAAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCASMAGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGADITIKAFLMKNLIPVTLGNIVGGALCVMAPFGSVFGS-WGKK 311          
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: A0A7S2AA06_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AA06_TRICV)

HSP 1 Score: 311 bits (798), Expect = 5.330e-102
Identity = 159/262 (60.69%), Postives = 195/262 (74.43%), Query Frame = 1
Query:  250 PSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK 1035
            P +KPPP +YQ AV  G  KASGS  K+F +G++SGCHIGFGA LA+++GG CP + A NPGLQKII GAFGLPFGL MT+V GGELFTGNTA+V AA +EGK +   L+KNWV SY+GNFVGSL+L +LA + G + N  +++ IATAK SL F  AF RGILCNWLVCMAV+M+   S   GK  A++ PISAFVALGLDHSVANMF+IPL M  GA +T +   + NL+PVTLGNIVGG + V   +    GS F K++
Sbjct:   51 PPLKPPPALYQGAVAAGVAKASGSWEKIFKLGVVSGCHIGFGAYLAITVGGACPQIAAANPGLQKIILGAFGLPFGLIMTLVTGGELFTGNTALVGAARLEGKTTTKDLVKNWVASYIGNFVGSLILAYLAFKSGTLGNAPASVAIATAKCSLPFDVAFVRGILCNWLVCMAVYMASGCSTMIGKMTAVWFPISAFVALGLDHSVANMFMIPLAMMRGAEITIADMFVKNLIPVTLGNIVGGLLCVMAPFGTTMGSWFKKEE 312          
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Match: B7G163_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G163_PHATC)

HSP 1 Score: 311 bits (798), Expect = 5.890e-102
Identity = 168/276 (60.87%), Postives = 203/276 (73.55%), Query Frame = 1
Query:  208 GGSTAAPVPAAASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVV-VNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKK 1032
            GG+ + P PA  S   +KPP  +Y+ AV  G  KAS S  K+F +GI+SGCHIGFGA LA+++GG CPGL  TNPGLQKI+ GAFGLPFGL MT+V GGELFTGNTA+VTAA +EGK S   L+KNW  SY+GNFVGSL+L +LA + G + V PG A  IA AK S+ +  AF RGILCNWLVCMAV+M+   S   GK  A++ PISAFVALGLDHSVANMF+IPLGM  GA +T +Q  + NL+PVTLGNIVGGAVAV   +  ++G  F  K
Sbjct:   39 GGAISLP-PAPVSVLDLKPPAALYEGAVAAGVAKASASFGKIFKLGIVSGCHIGFGAYLAIAVGGACPGLAQTNPGLQKIVMGAFGLPFGLIMTLVTGGELFTGNTALVTAAKMEGKISQKALVKNWTASYVGNFVGSLILAYLAYKSGTLGVAPG-ATNIALAKCSVAWDVAFVRGILCNWLVCMAVYMASGCSTLIGKMTAVWFPISAFVALGLDHSVANMFIIPLGMLRGADITIAQMFVKNLIPVTLGNIVGGAVAVMAPFGLSYGKWFQNK 312          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11.880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4R6_ECTSI1.060e-22798.26Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2UWW2_9STRA9.080e-10863.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U5HVT6_9STRA1.960e-10763.22Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
B8BXN4_THAPS3.570e-10561.69Formate/nitrite transporter family member n=1 Tax=... [more]
A0A835YP49_9STRA1.070e-10464.80Nitrite transporter NAR1 n=1 Tax=Tribonema minus T... [more]
A0A8J9ST54_9CHLO4.180e-10461.48Probable formate transporter 1 n=1 Tax=Coccomyxa s... [more]
A0A7S0GAY3_9STRA3.070e-10357.05Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A448ZQ46_9STRA2.740e-10261.89Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2AA06_TRICV5.330e-10260.69Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B7G163_PHATC5.890e-10260.87Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11contigEcto-sp13_S_contig11:56407..59029 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score632.5
Seed ortholog evalue1.2e-178
Seed eggNOG ortholog2880.D7G4R6
Model size1038
Hectar predicted targeting categorychloroplast
Exons5
EggNOG free text desc.Formate/nitrite transporter
EggNOG OGs2QUGF@2759,COG2116@1
Ec32 ortholog descriptionnitrite transporter NAR1
Ec32 orthologEc-20_000650.1
Cds size1038
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462568.8689108-CDS-Ecto-sp13_S_contig11:56406..568691681462568.8689108-CDS-Ecto-sp13_S_contig11:56406..56869Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 56407..56869 +
1681462568.8798156-CDS-Ecto-sp13_S_contig11:57589..577431681462568.8798156-CDS-Ecto-sp13_S_contig11:57589..57743Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 57590..57743 +
1681462568.895399-CDS-Ecto-sp13_S_contig11:58123..582721681462568.895399-CDS-Ecto-sp13_S_contig11:58123..58272Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 58124..58272 +
1681462568.9142659-CDS-Ecto-sp13_S_contig11:58546..586521681462568.9142659-CDS-Ecto-sp13_S_contig11:58546..58652Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 58547..58652 +
1681462568.9266725-CDS-Ecto-sp13_S_contig11:58863..590291681462568.9266725-CDS-Ecto-sp13_S_contig11:58863..59029Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11 58864..59029 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11.880.1prot_Ecto-sp13_S_contig11.880.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11 56407..59029 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11.880.1

>prot_Ecto-sp13_S_contig11.880.1 ID=prot_Ecto-sp13_S_contig11.880.1|Name=mRNA_Ecto-sp13_S_contig11.880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
MGFSSILSIALLLAPGSEAFLSARGAMPLASSRAVASPAAFRSTSLAPRQ
QQCNTKSLKMSTAAAPVVAGGSTAAPVPAAASAPSVKPPPQMYQNAVDIG
QKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKII
FGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSY
LGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNW
LVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMAL
GAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK*
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mRNA from alignment at Ecto-sp13_S_contig11:56407..59029+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11.880.1 ID=mRNA_Ecto-sp13_S_contig11.880.1|Name=mRNA_Ecto-sp13_S_contig11.880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2623bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:56407..59029+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGTTTCTCTTCGATCCTCTCGATAGCCTTGCTCTTGGCCCCCGGGTC GGAGGCCTTCCTGTCTGCTCGCGGAGCCATGCCGCTCGCCTCCTCGAGGG CGGTTGCATCACCGGCTGCCTTCCGCAGCACCTCCTTGGCACCGCGACAG CAGCAGTGCAATACCAAGAGCCTCAAGATGTCAACTGCCGCAGCTCCCGT AGTTGCCGGTGGCAGCACAGCAGCGCCAGTCCCAGCTGCGGCCAGTGCTC CCTCGGTAAAGCCTCCCCCGCAGATGTACCAGAACGCTGTCGACATTGGG CAGAAGAAAGCGTCGGGGTCAGTAGCGAAACTGTTCCTCATGGGCATAAT TTCGGGCTGCCACATTGGCTTTGGCGCGTTGCTGGCAGTGTCAATCGGAG GAAACTGCCCAGGACTTCTAGCTACGAACCCAGGACTGCAGAAGATCATT TTCGGGGCATTCGGTGGGTCCCTCGCGAGAAAGAACACGTAGTCCCGCGC AAACATAGATATCTTCGGCAGTTAGACTAAACTATTACTGTGAATGGTCC GCAGTTGGAGGTCAACAACGTCGAGTTTGGGATGAGGTCAACGCTCAGCT TCGTGTTCCATCGCCACGGTCGAGCATGGGTCTCGATAAAGGATGTTGCC TAGGATGGACGGCTGAGGTGTGTTTCGAAATGTTCATGTTTTTCGTGCGA ACCTGGACCCACTGTTCTTGCAGAATTTTTATTTTGCGGGCCCCAACGGC CGCGCCGGGTAATATTTAGCCATGTTGTCGGCTGCTGCTCTCGCTTTCGT TTACAAGACGACCCATGTTGTGCCATGGCTTATAAGACTCTATTCACCTG CAGAACGAACGGCCTTGCCTCATGTACCGTAAAGACCTACGAACGTTCCC ACGCAGTCTTGAGAAATACCTGGTAGAGTTTTGGGAACCAACCAAACTAT TCGCCTCCTCATGCGTGTATTGCTTGCTGTAGATACATCCTATTCGCCTT CCCGACCCCCTGGGTAGCGTCAATCAGTTTGATTTCGTGGGCACAGCAGT GGTTGTGCATGGGTGATTTTTCATCGTGCAAAGCAAATATTGTGGGCTGC TGTAGCATCTACGCATTCTTTGGCATGCGTCTCACGTCTTCACCGCTGAG CATTCCGCTGTACCTATGCAAACCCGTGTCCAGGTCTGCCGTTTGGACTT TTCATGACTGTCGTGGGAGGTGGCGAGTTGTTCACAGGCAACACTGCCGT GGTGACCGCGGCCGTTATCGAGGGCAAGGCTTCCATTGGCGGTCTGCTAA AGAATTGGGTTTTCTCCTACTTAGGCAACTTCGTCGGGTGCGTTGAGTGC TTCTTTCATGCCCCACGACGTACTTCTTTCGTACGCAAGAGTGACGTCTT GTCTACTCTCGCCGCTGAGAAAGTTGTCTCGATGTTCCTTGAAAGGAGAG GAGGACATAAAGTCATAGAAGGCGCTTCCATGTTTAGACACGTACTATTT TGAAGAAACAACCCATGTGTTACGGTCGGTTTTTCGGATGACTGACCACA TGAAACCATGAAAATCTACTTTAAAAAGCGGGCGCAGTGCCGTAGGCTTC TTTTTATTCGGACGACTGCCGCATCACACAGGAATGGAATGGTAGTAGCT ATTGGAGCCGGCACCCAAGCAGTGTAGTTGAAGCCTCGCGTTCTCGCATA CCGTCGCGTTTCGGCAGGTCGCTCTTGCTCGTGTTTTTGGCTGTGCAGGG TGGGGTAGTTGTTAACCCGGGATCTGCGATGGGCATTGCCACGGCCAAGA CGTCGCTCACCTTTGTGCAGGCGTTCGCTAGGGGGATACTGTGCAACTGG CTCGTCTGCATGGCAGGTGAGTGCGGTCGTGGATTTCGCGTCGAGAAGGC ATGACCGGGAGTTAGCCGAACGAACTGTGGTTGTACACATCCAGTCCACT GCTGTGTCAGATCGAACTTCGGGTTAGTGTTGTATCTTCGCGTGCCGCAT CGCGGAAGATAAGAAGGCATGCGACGGCCGCCAAGTTTGACATCGATGGC TACGCGCAGGGTTAACGAGCGGAGCTTGCCGTATGTGATTCCTTCCTCGA CCTCCGCTACCCCAATGTCTCTCGTGCTGTTTCCGTGCAGTGTGGATGTC GGTCAGCGCCAGCGATGCTGCCGGGAAGTTCTTCGCCATTTTCCTACCGA TCTCGGCGTTTGTCGCTTTGGGACTTGACCACAGCGTCGCCAACATGTGA GTCCCGGTAGCAGAAGTCGCTACTTCTCGTACGCGCTCGCGCGCATTTTT CACTAATAACAATGCGACCACCATCATTCTACGTAGTTGATTGATGATGG GCCATCGTGAGTTCTGAATAATTCCGTATTGGACTTTTTTCTTGAACTAT GCCGTTCTGCCTGTCGTCCTGCGTATGGTCCTGCTGTTGGAATCAACCGT CTGCAAGGTTCTTGATCCCTCTCGGGATGGCGCTCGGTGCTGGTGTAACT TGGTCGCAGTTCCTTCTGGCCAACTTGCTCCCGGTGACCTTGGGAAACAT CGTCGGAGGCGCTGTTGCCGTGTGCGGGCTGTACTCGGGTGCTTTCGGGT CGCTTTTTGGCAAGAAGAAGTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11:56407..59029+

>mRNA_Ecto-sp13_S_contig11.880.1 ID=mRNA_Ecto-sp13_S_contig11.880.1|Name=mRNA_Ecto-sp13_S_contig11.880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1038bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:56407..59029+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGTTTCTCTTCGATCCTCTCGATAGCCTTGCTCTTGGCCCCCGGGTC
GGAGGCCTTCCTGTCTGCTCGCGGAGCCATGCCGCTCGCCTCCTCGAGGG
CGGTTGCATCACCGGCTGCCTTCCGCAGCACCTCCTTGGCACCGCGACAG
CAGCAGTGCAATACCAAGAGCCTCAAGATGTCAACTGCCGCAGCTCCCGT
AGTTGCCGGTGGCAGCACAGCAGCGCCAGTCCCAGCTGCGGCCAGTGCTC
CCTCGGTAAAGCCTCCCCCGCAGATGTACCAGAACGCTGTCGACATTGGG
CAGAAGAAAGCGTCGGGGTCAGTAGCGAAACTGTTCCTCATGGGCATAAT
TTCGGGCTGCCACATTGGCTTTGGCGCGTTGCTGGCAGTGTCAATCGGAG
GAAACTGCCCAGGACTTCTAGCTACGAACCCAGGACTGCAGAAGATCATT
TTCGGGGCATTCGGTCTGCCGTTTGGACTTTTCATGACTGTCGTGGGAGG
TGGCGAGTTGTTCACAGGCAACACTGCCGTGGTGACCGCGGCCGTTATCG
AGGGCAAGGCTTCCATTGGCGGTCTGCTAAAGAATTGGGTTTTCTCCTAC
TTAGGCAACTTCGTCGGGTCGCTCTTGCTCGTGTTTTTGGCTGTGCAGGG
TGGGGTAGTTGTTAACCCGGGATCTGCGATGGGCATTGCCACGGCCAAGA
CGTCGCTCACCTTTGTGCAGGCGTTCGCTAGGGGGATACTGTGCAACTGG
CTCGTCTGCATGGCAGTGTGGATGTCGGTCAGCGCCAGCGATGCTGCCGG
GAAGTTCTTCGCCATTTTCCTACCGATCTCGGCGTTTGTCGCTTTGGGAC
TTGACCACAGCGTCGCCAACATGTTCTTGATCCCTCTCGGGATGGCGCTC
GGTGCTGGTGTAACTTGGTCGCAGTTCCTTCTGGCCAACTTGCTCCCGGT
GACCTTGGGAAACATCGTCGGAGGCGCTGTTGCCGTGTGCGGGCTGTACT
CGGGTGCTTTCGGGTCGCTTTTTGGCAAGAAGAAGTAA
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