mRNA_Ecto-sp13_S_contig2003.6535.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: D8LHS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHS7_ECTSI) HSP 1 Score: 622 bits (1603), Expect = 2.730e-218 Identity = 325/362 (89.78%), Postives = 338/362 (93.37%), Query Frame = 2
Query: 371 MGNLLYSPLRGHPIPPSAFSALVPRGLPAFVSSSVQGPPAPLLLNPASTCKSPPRHRRPIWSSVSRGGCGGVGRGFSRRRKHLHRASADQSLLLCSLTTEASDHVASPCPENPRSPRQDRDSRGDAIAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGGEAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGVEAMRRGVEACLLPSSPPQQTPKERKTELEERNER 1456
MGNLLYSPLRGH PPSAFSALVPRGLPAFVSSS Q PPA LLL+PASTCKSPPRHR PI SSVS GGCGGVGR F+RRRKHLHRASADQSLLLCSLTTEAS PCPEN RSPRQDRDSRGDAIAQATLRWIRSTV+GLNLCPWAAGALVGG LRVLVHPAQQP PAATD+QERLPGSDV GGVS+DSG+SSDAADLLEG V+VA EAV L+ALGGEAAANATTLVVARPPLAQGF+EFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAV+QISDPA VWERN+DTTRKLGVEAMRRGVEACL+PSSPPQQTPKE KT+LEERNER
Sbjct: 1 MGNLLYSPLRGHATPPSAFSALVPRGLPAFVSSSSQVPPALLLLHPASTCKSPPRHRPPIRSSVSCGGCGGVGREFARRRKHLHRASADQSLLLCSLTTEASR----PCPENTRSPRQDRDSRGDAIAQATLRWIRSTVIGLNLCPWAAGALVGGQLRVLVHPAQQPLPAATDYQERLPGSDVGGGVSKDSGASSDAADLLEGLVEVATGEAVALSALGGEAAANATTLVVARPPLAQGFEEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVEQISDPAKVWERNVDTTRKLGVEAMRRGVEACLVPSSPPQQTPKEAKTDLEERNER 358
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: A0A1W1X5E7_9NEIS (Uncharacterized protein n=1 Tax=Andreprevotia lacus DSM 23236 TaxID=1121001 RepID=A0A1W1X5E7_9NEIS) HSP 1 Score: 127 bits (320), Expect = 2.290e-30 Identity = 74/204 (36.27%), Postives = 105/204 (51.47%), Query Frame = 2
Query: 743 DAIAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGGEAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGV 1354
D + AT W+ V+GLNLCP+A V +R++V A+ L+GF++ RE L + + A TTL++ P L F F V G +E ++E GL G +Q+A+FHPQ++FEG+E D+ SNYTNR+PYP LHLL ED ++ A D A ++ERNI+ KLGV
Sbjct: 4 DDVIAATRLWLEKAVIGLNLCPFAKAVYVKNQVRIVVSEARH----------------------------------LDGFLEDLDRELDYL--VAADPAETDTTLLI-HPTLLADFLVFNDVTGIAEEAVEEHGLEGVIQIASFHPQFQFEGTEPDEISNYTNRAPYPTLHLLREDSIARAAAAFPDAAAIFERNIEVLEKLGV 170
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: A0A1E2UMS8_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Thiodiazotropha endoloripes TaxID=1818881 RepID=A0A1E2UMS8_9GAMM) HSP 1 Score: 127 bits (318), Expect = 4.670e-30 Identity = 74/214 (34.58%), Postives = 111/214 (51.87%), Query Frame = 2
Query: 743 DAIAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGGEAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGVEAMRRGVEAC 1384
+AI AT W+ TVVGLNLCP+AA + G +R LV P ++G + E T+ L A A+ L+V P + F ++L + V+E I E+GL GK QLA+FHP Y+F+GS+E D +NYTNRSPYP+ H + E+ ++ A+K P + +RNI+ R++G+EA+ + + C
Sbjct: 4 EAILAATRCWVEGTVVGLNLCPFAAVPVEAGRIRYLVCPESD----------------------------------MDGIYRAILAEFETMLQLQD---AEASLLIV--PAGLEAFDDYLDLLQVVEEVIPEAGLEGKFQLASFHPDYQFDGSDESDPANYTNRSPYPMFHFIREESLAEALKHYPQPELIPQRNIELLREMGLEAVEQRLARC 178
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: A0A0Q6U3L2_9BURK (Uncharacterized protein n=4 Tax=Burkholderiales TaxID=80840 RepID=A0A0Q6U3L2_9BURK) HSP 1 Score: 125 bits (314), Expect = 1.500e-29 Identity = 73/209 (34.93%), Postives = 103/209 (49.28%), Query Frame = 2
Query: 743 DAIAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGGEAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGVEAMRR 1369
+ + Q T W+ V+GLNLCP+A V +R +V A +P E +K ARE + LN E T +V P + F +F A D ++E L G +Q+A FHP Y+FEGSE DD +NY+NRSPYP LH+L ED + AV+ + D A+++E N++T KLGVE R+
Sbjct: 4 EQVIQDTRDWVIKAVIGLNLCPFAKAVHVNERIRYVVSDATEP----------------------------------EALLKDLARELLALNRADPE---EVDTTLVIHPNVLTDFLDFNDFLDAADALVEELKLDGILQIADFHPAYQFEGSEPDDIANYSNRSPYPTLHILREDSIERAVESMPDTASIYENNLETLDKLGVEGWRK 175
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: A0A7S2XWH7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWH7_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.240e-29 Identity = 75/214 (35.05%), Postives = 110/214 (51.40%), Query Frame = 2
Query: 749 IAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGG--EAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGVEAMRRGVEAC 1384
+ +AT+ W++ V+GLNLCPWA L G +R+ V Q DH G V R+ V+ R+ + + LG E +T L V + F+ +L V E ++E GL+ +Q+ATFHP Y+F +DD N+TNRSPYP+LH LLED+VS AV SD +W+RNI + +K G M++ ++ C
Sbjct: 89 VEEATMAWVKRVVIGLNLCPWAMPTLKDGKMRIQVSQGQ-------DH----------GAVLRE--------------VRRCVRKLASDHRLGQTREEGNPSTVLFVCPQKMLARFEVYLDFVEMVQEMLEEEGLQDVLQVATFHPHYQFAEHGKDDVENFTNRSPYPILHFLLEDEVSEAVDNYSDTDKIWQRNIQSMQKAGTAEMKKVLKNC 271
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: A0A2V7YM76_9BACT (DUF1415 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7YM76_9BACT) HSP 1 Score: 124 bits (312), Expect = 3.150e-29 Identity = 74/209 (35.41%), Postives = 108/209 (51.67%), Query Frame = 2
Query: 743 DAIAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGGEAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGVEAMRR 1369
+ I +AT +W+ V+GLNLCP+A +R +V A+ P +E L ADL++ +AA E + TTL++ P + F ++ G ++ + GL G +Q+A+FHP Y+F G+E DD +NYTNRSPYP LHLL E V AV + D A ++ERN++T R+LGVE RR
Sbjct: 6 EEIVKATRQWLEKAVIGLNLCPFAKPVHARDQIRYVVSQAETP-------EELL-------------------ADLIDELQTLAAAEPEEIE----------TTLLI-HPRVLNDFLDYNDFLGVAEDTVAGLGLEGVLQVASFHPDYQFAGTEPDDVTNYTNRSPYPTLHLLREASVERAVAAVPDAAEIYERNMETLRRLGVEGWRR 177
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: UPI00055108BC (DUF1415 domain-containing protein n=1 Tax=Andreprevotia chitinilytica TaxID=396808 RepID=UPI00055108BC) HSP 1 Score: 124 bits (310), Expect = 5.570e-29 Identity = 72/206 (34.95%), Postives = 105/206 (50.97%), Query Frame = 2
Query: 737 RGDAIAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGGEAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGV 1354
R + I T +W+ V+GLNLCP+A V +R++V A+ L+GF++ RE L+ L A T ++ P L F F V G +E + E L G +Q+A+FHPQ++F+G+E DD SNYTNRSPYP LHLL E ++ AV+ D + ++ERNI+T +KLG+
Sbjct: 2 RQEDILSVTRQWLEKAVIGLNLCPFAKSVYVKNQVRIVVSEARH----------------------------------LDGFLEDLDRE---LDLLAATDPAEIDTTLLIHPSLFDDFLIFNDVTGIAEEAVAEHELEGVIQVASFHPQFQFDGTEPDDISNYTNRSPYPTLHLLREASIARAVEAFPDASAIFERNIETLQKLGL 170
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: UPI0015660F00 (DUF1415 domain-containing protein n=1 Tax=Paraburkholderia sp. NMBU_R16 TaxID=2698676 RepID=UPI0015660F00) HSP 1 Score: 124 bits (310), Expect = 6.240e-29 Identity = 75/209 (35.89%), Postives = 102/209 (48.80%), Query Frame = 2
Query: 743 DAIAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGGEAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGVEAMRR 1369
+A+ AT W+ V+GLNLCP+A G +R +V SDA D+ ++ A L L A T ++ P F EF + +D+ GL+G +Q+A+FHP YRFEGSE +D NYTNR+PYP+LHLL E V+ AV D A+V+ERNI+T R+LG E RR
Sbjct: 9 EAVVAATQHWLVRAVIGLNLCPFAKAVHAKGQIRYVV---------------------------------SDARDMEGALTELEAE----LKWLAEADPAQVDTTLLILPHALGAFLEFNDCVFFAERLVDQLGLQGMLQIASFHPDYRFEGSEPEDIENYTNRAPYPILHLLREASVTRAVDAFPDAADVYERNIETMRRLGHECWRR 180
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: A0A831W436_9GAMM (DUF1415 domain-containing protein n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A831W436_9GAMM) HSP 1 Score: 124 bits (310), Expect = 8.230e-29 Identity = 76/214 (35.51%), Postives = 106/214 (49.53%), Query Frame = 2
Query: 746 AIAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGGEAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGVEAMRRGVEACL 1387
AI AT RWIR V+GLNLCP+AA + +R LV P ++P E + E L E +V P + F ++L + + ++ I E+GL G +QLA+FHP Y FEG+ EDD +NYTNRSPYP+ HL+ + ++ AV + DP + ERNI T R+LG+ MRR +E L
Sbjct: 6 AIVAATRRWIREVVIGLNLCPFAAAPMERETIRYLVCPERRP----------------------------------EAIYRALLAEMEVFVQLPEEQVETGLFIV---PAGLESFDDYLDLLYSAEQAIPEAGLEGVLQLASFHPDYLFEGAPEDDPANYTNRSPYPMFHLIRSEGLARAVARYPDPEQIPERNIRTLRELGLAEMRRRLERVL 182
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Match: A0A7S0DXV1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DXV1_9CRYP) HSP 1 Score: 125 bits (315), Expect = 8.940e-29 Identity = 72/218 (33.03%), Postives = 108/218 (49.54%), Query Frame = 2
Query: 731 DSRGDAIAQATLRWIRSTVVGLNLCPWAAGALVGGHLRVLVHPAQQPPPAATDHQERLPGSDVAGGVSRDSGSSSDAADLLEGFVKVAAREAVTLNALGGEAAANATTLVVARPPLAQGFQEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVKQISDPANVWERNIDTTRKLGVEAMRRGVEAC 1384
D R ++++T+ WI+S V+GLNLCPWA AL G + + V A P A + G+ +E RE T ++ L F ++ +A +D ID+ RG +QLATFHPQY+F +EEDD N+TNRSPYP+ HLL E ++ A++ DP VW+RN+ T ++ G M++ ++ C
Sbjct: 79 DQRRAMVSESTMSWIKSAVIGLNLCPWAKSALKEGLIDIKVSDA----PDANSLMNEVVGN-------------------IEEMADSEGRE----------------TRIIVTECLLANFADYNKIANTIDRKIDQMDCRGIIQLATFHPQYQFADAEEDDVENWTNRSPYPMFHLLREIEIEEALEDYDDPDEVWQRNMRTVKEKGKCFMQQLLDRC 257 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2003.6535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig2003.6535.1 >prot_Ecto-sp13_S_contig2003.6535.1 ID=prot_Ecto-sp13_S_contig2003.6535.1|Name=mRNA_Ecto-sp13_S_contig2003.6535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=363bp MGNLLYSPLRGHPIPPSAFSALVPRGLPAFVSSSVQGPPAPLLLNPASTCback to top mRNA from alignment at Ecto-sp13_S_contig2003:767..5348- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig2003.6535.1 ID=mRNA_Ecto-sp13_S_contig2003.6535.1|Name=mRNA_Ecto-sp13_S_contig2003.6535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4582bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2003:767..5348- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig2003:767..5348- >mRNA_Ecto-sp13_S_contig2003.6535.1 ID=mRNA_Ecto-sp13_S_contig2003.6535.1|Name=mRNA_Ecto-sp13_S_contig2003.6535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1089bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2003:767..5348- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |