mRNA_Ecto-sp13_S_contig1999.6497.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: A0A6H5KL98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL98_9PHAE) HSP 1 Score: 550 bits (1417), Expect = 1.520e-190 Identity = 403/466 (86.48%), Postives = 408/466 (87.55%), Query Frame = 1
Query: 208 MAPQPRAAQVSPPKPWDQQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXGRYARPLSSASGQPQQLGQQRGGLPVRTVGSAPAVAAGSGVAAGGIGRLSSVGXXXXXXXXXXXXXXSRGAPGGEGGAAVVSTAQHDVGAATXXXXXXXXXXXXLANGTSTAPIVGRQQQQQAGYGTYGGVQSGYGSTAGSYGPANRYXXXXXXXXXXXXXSGYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGASRYGMGGMGMXXXXGGMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGSVSGGNGRARAAAGAADRMGRHQQRGRVGWGGGESAVSGTGAXXXXXXXXXEGFDGMDPWSGF 1605
MAPQPRAAQVSPPK WDQ XXXXXXXXXXXXXXXXXXXXXXXXXXX RYAR LSS GQPQQL QQRGGLPVRT GSAPAVAAGSGVAAGG+ RLSSVG SRG GGEG AAVVSTAQ DVGAA XXXXXXX LANGTSTAP+VG QQQQQAG GTYGGVQSGYGSTAG+YGPA XXXXXXXXXXXXXS YGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YGASRYGMGGMG XXXXGGMD QYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFR SRALHRLISGRHRPRPAIAQASLEDIYSLQQRG V GGNG+AR A GAADRMGRHQQRG ESAV+G G XXXXXXXXXEGFDGMDPWSGF
Sbjct: 1 MAPQPRAAQVSPPKSWDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RYARSLSSVIGQPQQLAQQRGGLPVRTAGSAPAVAAGSGVAAGGMSRLSSVGGRPATTGGNVARVASRGPSGGEGAAAVVSTAQQDVGAAEATAXXXXXXXGGLANGTSTAPVVGHQQQQQAGNGTYGGVQSGYGSTAGNYGPAXXXXXXXXXXXXXXXXSSYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGASRYGMGGMGXXXXXGGMDHQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRASRALHRLISGRHRPRPAIAQASLEDIYSLQQRGRVGGGNGQARTAVGAADRMGRHQQRGXXXXXXXESAVAGAGXXXXXXXXXXEGFDGMDPWSGF 465
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: D8LEW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW3_ECTSI) HSP 1 Score: 259 bits (661), Expect = 8.310e-81 Identity = 144/161 (89.44%), Postives = 144/161 (89.44%), Query Frame = 1
Query: 1123 ANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGSVSGGNGRARAAAGAADRMGRHQQRGRVGWGGGESAVSGTGAXXXXXXXXXEGFDGMDPWSGF 1605
ANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRG V GGNGRA AAAGAADRMGR QQRGRVGW XXXXXXXXXEGFDG DPWSGF
Sbjct: 13 ANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGVGGGNGRANAAAGAADRMGRRQQRGRVGWXXXXXXXXXXXXXXXXXXXXXEGFDGTDPWSGF 173
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: A0A836CLC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLC2_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.420e-48 Identity = 84/136 (61.76%), Postives = 108/136 (79.41%), Query Frame = 1
Query: 1009 GGMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALH-----RLISGRHRPRPAIAQASLEDIYS 1401
GGM Q+SWLHSIQHFTSS+GYLTE+LGMNTQAIGF NLM F+E+ G +L S+QPWREFPPGHPRHGEPPPT EEERRR++R+RVLR+ +L++AYAGF++ R L R ++ R P +A+ ++E+I+S
Sbjct: 59 GGMGPQFSWLHSIQHFTSSMGYLTELLGMNTQAIGFFVGNLMSFIENAGLALASLQPWREFPPGHPRHGEPPPTAEEERRRVTRVRVLRWVASLLIAYAGFKLLRLLRGAPQRRALTHRAAPTRMLAETAMENIFS 194
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: D8LEW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW2_ECTSI) HSP 1 Score: 144 bits (362), Expect = 5.480e-36 Identity = 175/309 (56.63%), Postives = 180/309 (58.25%), Query Frame = 1
Query: 208 MAPQPRAAQVSPPKPWDQQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXG-RYARPLSSASGQPQQLGQQRGGLPVRTVGSAPAVAAGSGVAAGGIGRLSSVGXXXXXXXXXXXXXXSRGAPGGEGGAAVVSTAQHDVGAATXXXXXXXXXXXXLANGTSTAPIVGRQQQQQAGYGTYGGVQSGYGSTAGSYGPANRYXXXXXXXXXXXXXSGYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---YGASRYGMGGMGMXXXXGGMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVF 1122
MAPQPRAAQVSPPKPWDQQ XXXXXXXXXXXXXXXXXXXXXXXX G RYARPLSS R GLP EG A ++ + + AGYGTYGGVQSGYGSTAGSYGPAN XXXXXXXXXXXXXS YGSSYGAGG XXXXXXXXXXX XXXXXXX YGASRYG GGMG XXX GGMDQQYSWLHSIQHF+SSLGYLTEMLGMNTQAIGFVF
Sbjct: 1 MAPQPRAAQVSPPKPWDQQXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGERYARPLSSQV-------SLREGLP-------------------------------------------------EGKAPLLLPRRR-------------------SKMWGQXXXXXXXXXXXAGYGTYGGVQSGYGSTAGSYGPANXXXXXXXXXXXXXXXSSYGSSYGAGGYXXXXXXXXXXXGYGGGMSSMYGXXXXXXXXXXYGASRYGTGGMGXXXXMGGMDQQYSWLHSIQHFSSSLGYLTEMLGMNTQAIGFVF 234
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: A0A7S2UWF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWF4_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.090e-23 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 1036 LHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWR-EFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRA---LHRLISGRHRPRPAIA 1374
LH SLG LTE+LGMNT A+G + ++ +G LE + + ++ +QPW+ +FPPGHPRHGEP PTPEEERRR+ RLRVLRF AY ++ + L RL+ G R PA+A
Sbjct: 5 LHGFHQAIMSLGQLTELLGMNTHALGQLGSSCLGILEAVSSFISHLQPWQPDFPPGHPRHGEPQPTPEEERRRIHRLRVLRFFTACFAAYLAYKYAHRWSWLRRLL-GLRRQLPALA 120
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: A0A484EDV4_BRELC (Peroxin-13 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDV4_BRELC) HSP 1 Score: 91.3 bits (225), Expect = 1.540e-16 Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 1
Query: 967 SRYGMGGMGMXXXXGGMDQ-QYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHI----GNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQAS---LEDIYSLQQR 1413
SR GMGGM M G ++ WL +I SS+G +TE+LGMN +A+ F + + F+E I T + P FPPGHPRHGEPP + EEE+ R R+R+ +F +++ + A ++ R + RL S R RP+ +A ++ D+ S+ QR
Sbjct: 151 SRLGMGGM-MGGASGDLNSGSLGWLSNINQMVSSIGQITELLGMNAEALNFCITSFIHFIERIRAMCAGIATMLAPRPVFPPGHPRHGEPPISEEEEKIRRRRVRIFQFMVSMFLLTALYKGVRWITRL-SIRTRPKMLVAPSTDVMTCDLESIFQR 305
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: A0A1V9Z127_9STRA (Peroxin-13 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z127_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.690e-16 Identity = 48/127 (37.80%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 1033 WLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTS----IQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYS 1401
WL+S S++G +T++LGMN +A+ F F N + F+E + TS + P FPPGHPR+GEPP T EE + RL R++V++F ++L++ Y ++ + L R++ R R P + L+ IY+
Sbjct: 155 WLNSFNQTVSAVGQITQLLGMNAEALNFCFGNFVHFMERMAFMCTSAVAMLSPKPVFPPGHPRYGEPPETEEEIKSRLRRVKVVKFVVSLLIIYVASKLGQKL-RMLLWRTRKSPQ-KRLPLDSIYN 279
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: A0A6A3UN19_9STRA (Peroxin-13 n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UN19_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.880e-16 Identity = 52/126 (41.27%), Postives = 70/126 (55.56%), Query Frame = 1
Query: 979 MGGMGMXXXXGGMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQ----PWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLIS 1344
MGG M GG+ WL S SS+G +TE+LGMN +A+ F + + FLE IG I P FPPGHPRHGEPP T EEE+ R+ R+R+ +F +++ ++ R L RL S
Sbjct: 167 MGGGMMDPNGGGL----GWLSSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAAMLAPRPVFPPGHPRHGEPPATEEEEKSRVRRVRIFQFMVSMAALACAYKGLRWLTRLRS 288
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: A0A833WCQ5_PHYIN (Peroxin-13 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WCQ5_PHYIN) HSP 1 Score: 89.7 bits (221), Expect = 4.620e-16 Identity = 47/101 (46.53%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 1033 WLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQ----PWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALT---LVVAYAGFR 1314
WL+S SS+G +TE+LGMN +A+ F + + FLE IG I P FPPGHPRHGEPP T EEE+ RL R+R+++F ++ L V Y G R
Sbjct: 172 WLNSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAVCAGIAAMLAPRPTFPPGHPRHGEPPVTEEEEKSRLRRVRIVQFMVSMAALTVVYKGLR 272
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Match: G5A3S2_PHYSP (Peroxin-13 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A3S2_PHYSP) HSP 1 Score: 89.4 bits (220), Expect = 7.070e-16 Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 1033 WLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQ----PWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASL---EDIYSLQQR 1413
WL S SS+G +TE+LGMN +A+ F + + FLE IG I P FPPGHPRHGEPP T EEE+ RL R+R+ +F +++ ++ R L RL S + + +A S+ D+ ++ QR
Sbjct: 180 WLASFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAAMLAPRPVFPPGHPRHGEPPVTEEEEKSRLRRVRIFQFMVSMAALGCVYKGLRWLARLRSPKAPAKLLVAPPSVGMGRDLENIFQR 313 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1999.6497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1999.6497.1 >prot_Ecto-sp13_S_contig1999.6497.1 ID=prot_Ecto-sp13_S_contig1999.6497.1|Name=mRNA_Ecto-sp13_S_contig1999.6497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=467bp MAPQPRAAQVSPPKPWDQQHQQQQPGGALGSPSSAARPTTLASGAGGGGRback to top mRNA from alignment at Ecto-sp13_S_contig1999:1530..6780- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1999.6497.1 ID=mRNA_Ecto-sp13_S_contig1999.6497.1|Name=mRNA_Ecto-sp13_S_contig1999.6497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5251bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1999:1530..6780- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1999:1530..6780- >mRNA_Ecto-sp13_S_contig1999.6497.1 ID=mRNA_Ecto-sp13_S_contig1999.6497.1|Name=mRNA_Ecto-sp13_S_contig1999.6497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1401bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1999:1530..6780- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |