prot_Ecto-sp13_S_contig19744.6381.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig19744.6381.1
Unique Name	prot_Ecto-sp13_S_contig19744.6381.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	179

Homology

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: A0A6H5KWP6_9PHAE (UDP-glucuronate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWP6_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 2.670e-119
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query:    1 RSDEYVSSSRVQEMVEVEVQRRVQQQVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            RSDEYVSSSRVQEMVEVEVQRRVQQQVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV
Sbjct:   88 RSDEYVSSSRVQEMVEVEVQRRVQQQVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 266

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: W7TKX8_9STRA (UDP-glucuronate decarboxylase (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKX8_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.190e-71
Identity = 119/172 (69.19%), Postives = 135/172 (78.49%), Query Frame = 0

Query:    8 SSRVQEMVEVEVQRRVQQQVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            S+ ++++++ E+  +V ++V+ +N   H     GGK       FPPTA L E  RMRVLVTGGAGFVGSHLVD LM  GH+VIV+DN FTGR+KNV HWIGHP F LI HDVVEPI LEVDQIYHLACPASPPHYQYNPIKTIKTST GTLNMLGLAKR  ARMLLTSTSEV
Sbjct:  108 SAALRDVIQHEIGHQVHERVNAMNKA-HQAAGWGGKV------FPPTATLPESQRMRVLVTGGAGFVGSHLVDRLMAEGHEVIVVDNMFTGRKKNVAHWIGHPHFMLIVHDVVEPILLEVDQIYHLACPASPPHYQYNPIKTIKTSTMGTLNMLGLAKRVRARMLLTSTSEV 272

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: A0A836C7X9_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X9_9STRA)

HSP 1 Score: 228 bits (580), Expect = 3.170e-70
Identity = 122/167 (73.05%), Postives = 132/167 (79.04%), Query Frame = 0

Query:   14 MVEVEVQRRVQQ-QVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            MVE E+ RR    +  L+ S   T+P E  +  A A   P  A L E +R R+LVTGGAGFVGSHLVD LM  GH+VIVLDN FTGR+KNVQHWIGHP F LI HDVVEPI LE+DQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV
Sbjct:   54 MVERELDRRNSALEAHLVTSLMVTMPDELVENGA-APKHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 219

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: A0A4D9D2V9_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2V9_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.290e-69
Identity = 119/172 (69.19%), Postives = 135/172 (78.49%), Query Frame = 0

Query:    8 SSRVQEMVEVEVQRRVQQQVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            S+ ++++++ E+  +V ++V+ +N   H     GGK       FPPTA L E  RMRVLVTGGAGFVGSHLVD LM  GH+VIV+DN FTGR+KNV HWIGHP F LI HDVVEPI LEVDQIYHLACPASPPHYQYNPIKTIKTST GTLNMLGLAKR  ARMLLTSTSEV
Sbjct:   98 SAALRDVIQHEISHQVHERVNAMNKA-HQAAGWGGKV------FPPTATLPESQRMRVLVTGGAGFVGSHLVDRLMAEGHEVIVVDNMFTGRKKNVAHWIGHPHFMLIVHDVVEPILLEVDQIYHLACPASPPHYQYNPIKTIKTSTMGTLNMLGLAKRVRARMLLTSTSEV 262

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: A0A4D9CY17_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY17_9STRA)

HSP 1 Score: 220 bits (561), Expect = 9.790e-67
Identity = 113/153 (73.86%), Postives = 119/153 (77.78%), Query Frame = 0

Query:   34 PHTLPSEGGKGPAVAND-------FPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            PH  P   G G    +        +PPTA LSE  R R+LVTGGAGFVGSHLVD LM  GH+VIV+DN FTGR+KNV HWIGHP F LI HDVVEPI LEVDQIYHLACPASPPHYQYNPIKTIKTST GTLNMLGLAKR  ARMLLTSTSEV
Sbjct:  117 PHARPGTLGDGERTVSRQEQLGQLYPPTATLSEGQRRRILVTGGAGFVGSHLVDRLMAEGHEVIVVDNMFTGRKKNVAHWIGHPHFMLIVHDVVEPILLEVDQIYHLACPASPPHYQYNPIKTIKTSTMGTLNMLGLAKRVRARMLLTSTSEV 269

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: K8YTX9_NANGC (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTX9_NANGC)

HSP 1 Score: 221 bits (563), Expect = 1.050e-66
Identity = 113/153 (73.86%), Postives = 119/153 (77.78%), Query Frame = 0

Query:   34 PHTLPSEGGKGPAVAND-------FPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            PH  P   G G    +        +PPTA LSE  R R+LVTGGAGFVGSHLVD LM  GH+VIV+DN FTGR+KNV HWIGHP F LI HDVVEPI LEVDQIYHLACPASPPHYQYNPIKTIKTST GTLNMLGLAKR  ARMLLTSTSEV
Sbjct:  127 PHARPGTRGDGERTVSRQEQLGQLYPPTATLSEGQRRRILVTGGAGFVGSHLVDRLMAEGHEVIVVDNMFTGRKKNVAHWIGHPHFMLIVHDVVEPILLEVDQIYHLACPASPPHYQYNPIKTIKTSTMGTLNMLGLAKRVRARMLLTSTSEV 279

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: A0A401P7C4_SCYTO (UDP-glucuronic acid decarboxylase 1 (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401P7C4_SCYTO)

HSP 1 Score: 208 bits (529), Expect = 3.300e-65
Identity = 102/175 (58.29%), Postives = 135/175 (77.14%), Query Frame = 0

Query:    5 YVSSSRVQEMVEVEVQRRVQQQVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            +VS   +QE  E +++R++++ ++ L  +   + +      +++  +PP   L+EKDR R+L+TGGAGFVGSHL D LM  GH+V V+DNFFTGR++NV+HWIGH +F LI HDVVEP+ +EVDQIYHLA PASPP+Y YNPIKT+KT+T GTLNMLGLAKR GAR+LL STSEV
Sbjct:   34 FVSMRSLQEEGEQKIERKIEEALAPLKEKIREIET------SISQKYPPVKFLTEKDRKRILITGGAGFVGSHLADKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 202

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: A0A7S3H6G5_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6G5_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.140e-64
Identity = 102/129 (79.07%), Postives = 113/129 (87.60%), Query Frame = 0

Query:   51 FPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            FP    L +++RMR+LVTGG+GFVGSHLVD LM  GH VIV+DN FTGRQ+NV HW+GHP+F LI HDV+EPI LEVDQIYHLACPASPPHYQYNPIKTIKTST+GTLNMLGLAKR  ARMLLTSTSEV
Sbjct:  103 FPEVKILPDRERMRILVTGGSGFVGSHLVDRLMIAGHQVIVVDNMFTGRQRNVAHWLGHPNFQLIIHDVIEPIMLEVDQIYHLACPASPPHYQYNPIKTIKTSTEGTLNMLGLAKRVKARMLLTSTSEV 231

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: A0A6V1P8H7_HETAK (UDP-glucuronate decarboxylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P8H7_HETAK)

HSP 1 Score: 213 bits (543), Expect = 1.360e-64
Identity = 108/174 (62.07%), Postives = 129/174 (74.14%), Query Frame = 0

Query:    6 VSSSRVQEMVEVEVQRRVQQQVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            V    ++ MV VE+ ++ +  + +   +  TL     +       +P    LSE +R R+LVTGGAGFVGSHLVD LM  GH+VIV+DN FTGR++NV HW GHP F L+ HDVVEPI LEVDQIYHLACPASPPHYQ+NPIKTIKTST+GTLNMLGLAKR GAR+LLTSTSEV
Sbjct:   43 VDPETIRAMVRVEMAKKSEAIMQMREDQLATLNFHDRESTVATGRYPQVEILSEAERKRILVTGGAGFVGSHLVDRLMLAGHEVIVVDNMFTGRKQNVGHWFGHPHFTLVEHDVVEPIMLEVDQIYHLACPASPPHYQFNPIKTIKTSTEGTLNMLGLAKRVGARILLTSTSEV 216

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BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Match: A0A8C5CL94_GADMO (UDP-glucuronic acid decarboxylase 1 n=6 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A8C5CL94_GADMO)

HSP 1 Score: 213 bits (541), Expect = 1.810e-64
Identity = 105/175 (60.00%), Postives = 133/175 (76.00%), Query Frame = 0

Query:    5 YVSSSRVQEMVEVEVQRRVQQQVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEV 179
            Y +   +QE+ E+++++R+ + V+ L  + H L        +    +PP   LSEKDR R+L+TGGAGFVGSHL D LM  GH+V V+DNFFTGR++NV+HWIGH +F LI HDVVEP+ +EVDQIYHLA PASPP+Y YNPIKT+KT+T GTLNMLGLAKR GAR+LL STSEV
Sbjct:   35 YTNMRSIQELSEMKIEQRIDEAVAPLREKIHDLEL------SFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 203

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig19744.6381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KWP6_9PHAE	2.670e-119	100.00	UDP-glucuronate decarboxylase n=2 Tax=Ectocarpus T...	[more]
W7TKX8_9STRA	1.190e-71	69.19	UDP-glucuronate decarboxylase (Fragment) n=1 Tax=N...	[more]
A0A836C7X9_9STRA	3.170e-70	73.05	UDP-glucuronate decarboxylase n=1 Tax=Tribonema mi...	[more]
A0A4D9D2V9_9STRA	1.290e-69	69.19	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
A0A4D9CY17_9STRA	9.790e-67	73.86	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
K8YTX9_NANGC	1.050e-66	73.86	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
A0A401P7C4_SCYTO	3.300e-65	58.29	UDP-glucuronic acid decarboxylase 1 (Fragment) n=1...	[more]
A0A7S3H6G5_9STRA	1.140e-64	79.07	UDP-glucuronate decarboxylase n=1 Tax=Spumella elo...	[more]
A0A6V1P8H7_HETAK	1.360e-64	62.07	UDP-glucuronate decarboxylase n=1 Tax=Heterosigma ...	[more]
A0A8C5CL94_GADMO	1.810e-64	60.00	UDP-glucuronic acid decarboxylase 1 n=6 Tax=Eutele...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 59..178 e-value: 8.7E-47 score: 161.9
None	No IPR available	PANTHER	PTHR43078	FAMILY NOT NAMED	coord: 32..179
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 66..179 e-value: 5.1E-20 score: 72.1
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 63..179

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig19744	contig	Ecto-sp13_S_contig19744:156..2887 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig19744.6381.1	mRNA_Ecto-sp13_S_contig19744.6381.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig19744 156..2887 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig19744.6381.1 ID=prot_Ecto-sp13_S_contig19744.6381.1|Name=mRNA_Ecto-sp13_S_contig19744.6381.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp
RSDEYVSSSRVQEMVEVEVQRRVQQQVSLLNSEPHTLPSEGGKGPAVAND
FPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQ
KNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTI
KTSTQGTLNMLGLAKRTGARMLLTSTSEV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR036291	NAD(P)-bd_dom_sf