prot_Ecto-sp13_S_contig1974.6377.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1974.6377.1
Unique Nameprot_Ecto-sp13_S_contig1974.6377.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length864
Homology
BLAST of mRNA_Ecto-sp13_S_contig1974.6377.1 vs. uniprot
Match: D7FKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD5_ECTSI)

HSP 1 Score: 1459 bits (3777), Expect = 0.000e+0
Identity = 768/864 (88.89%), Postives = 795/864 (92.01%), Query Frame = 0
Query:    1 MKAKGGGQVRKGTQVDCLFGDEYFRGKVDDTDCGGSSYRVIFDDGDVREDAPPEDLELPLEQGCRVECMFEGEDGYFDGIISIDNGDATYKVDFDDGDVLDAAPRHDIHVLSWPHEESAPSSAMTAEDNSTNVAEQEGKGFDTRYSDRSHNKAESEGNREVQKDGENSKGISAAYGELPPGEATHDSPHRSQPSSEVDGSEDGCGRARDEKAGTSQHGSTRRDLGSSSGEPQRRHDSWTGRESRGTPSNRNEPTTELVQASSLYVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAVLEEQLRQQEARGEAWHLPVFSAETPLHPADPSLRGRPERQGESNPEQAPGSGGEGSPRATTARGGAAAPSFPAHAELRKVAEDLSTLRMKQARGTHPDFSRRLCYGDASLEMVQAIADLADGYAKEDLWPQASNSIVSNHMARAADILARDKGSRFPGNGLFLTAPPRGGTYVNPRLRFEGHSGLRGDEPRGACTEGPRARGLAFPTENRYSDPALCRSLTPARSARLLLELVKGLRLSVVEGGERGQVEREKFEVFISTHKDKALRSARPRLLVEAQMPSNCGWGAALGCLRRYSPFFADLNLKIMEGMQQKQAAKVRLAFQAVDPDGTGCAEAEILALMVADDEEDKVVEGGVGTARQRLRSLLHIRVQTLTGRCETHTNRLPAACRNLSEALAELERLGLGEACSSVQVLNALTDALALTHQRHQEISSIKAKKLAETWIQGKEGQDLWKQECKRLVLECRRRLEVVPRAEIEERTRQALVTYRSKILTRELGGKEKELDTAEDYLVRAWEILESRHGRNDPDVGAACISLGNLAIIRRRLNEAIDWFRRALGTFE 864
            MKA+GGGQVRKGT+VDCLFGDEYFRGKVDDTD  GSSYRVIFDDGD+REDAPPEDLELPLEQGCRVECMFEGEDGYFDG+ISIDNGDATYKVDFDDGDVLDAAPRHDI VLSW HEESAPS A+TAEDN+TNVAEQEG GFDTRYSDRSHN+AESEGNRE QKD ENSK ISAA+GELPP E THDSP + Q  SEVDGSEDG GRA DE AGTSQHGS+ R LGSSSGEPQR HDSWTGRE RGT SNRNEPTTELVQASSLYVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAVLEEQLRQQEARGEAWHLPVFSAETPLHPADPSLRGR ERQG S+PEQA GSGGEGSPRATTARGGAAAPSFPAHAELR+VAEDLSTLRMKQ          RLCYGDASLEMVQAIADLADGYAKEDLWPQ     VSNHMARAADILARDKGSR PGNG F+TA P GGTYV+PRLRF+GHSGLRGDEPRG   EG RARGLAFPTENRYSDPALCRSLT ARSARLLLEL+KGLRLSVVEGGERGQVERE FE F+STHKDKALRSAR RLL+EAQMPSNCGWGAALGCLRR SP FADLNLKIMEG+QQKQAAKVRLAFQAVDPDGTGCAE+EILALMVADDEE+  VEG VG A QRLRSLLH+RVQTLTGRCETHTNRL AA RNLSEALAELERLGLGEA  SV VLNALTDALALTH+RHQE+SSIKAKKLAETWIQGKEGQDLWKQECKRLVLECRRRLEVVPRAEIEERT QALV YRSKILTRELGGK KELDTAEDYLVR WEILESRHGRNDPDVGAAC+SLG+LA+IRRRLNEAIDWFRRALGTFE
Sbjct:    1 MKAEGGGQVRKGTRVDCLFGDEYFRGKVDDTDGSGSSYRVIFDDGDIREDAPPEDLELPLEQGCRVECMFEGEDGYFDGVISIDNGDATYKVDFDDGDVLDAAPRHDIRVLSWSHEESAPSKAVTAEDNNTNVAEQEGTGFDTRYSDRSHNEAESEGNREAQKDDENSKVISAAHGELPPVEETHDSPRQPQRFSEVDGSEDGYGRAGDEPAGTSQHGSSPRHLGSSSGEPQRIHDSWTGRELRGTLSNRNEPTTELVQASSLYVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAVLEEQLRQQEARGEAWHLPVFSAETPLHPADPSLRGRLERQGRSDPEQATGSGGEGSPRATTARGGAAAPSFPAHAELRQVAEDLSTLRMKQIALV------RLCYGDASLEMVQAIADLADGYAKEDLWPQ-----VSNHMARAADILARDKGSRVPGNGFFITATPGGGTYVDPRLRFKGHSGLRGDEPRGGYPEGQRARGLAFPTENRYSDPALCRSLTQARSARLLLELLKGLRLSVVEGGERGQVERENFEAFLSTHKDKALRSARHRLLLEAQMPSNCGWGAALGCLRRNSPLFADLNLKIMEGVQQKQAAKVRLAFQAVDPDGTGCAESEILALMVADDEEETAVEGRVGVAWQRLRSLLHVRVQTLTGRCETHTNRLAAASRNLSEALAELERLGLGEASGSVPVLNALTDALALTHRRHQEMSSIKAKKLAETWIQGKEGQDLWKQECKRLVLECRRRLEVVPRAEIEERTWQALVAYRSKILTRELGGKGKELDTAEDYLVRVWEILESRHGRNDPDVGAACVSLGSLAVIRRRLNEAIDWFRRALGTFE 853          
BLAST of mRNA_Ecto-sp13_S_contig1974.6377.1 vs. uniprot
Match: A0A6H5JCV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV6_9PHAE)

HSP 1 Score: 923 bits (2385), Expect = 0.000e+0
Identity = 525/772 (68.01%), Postives = 552/772 (71.50%), Query Frame = 0
Query:    1 MKAKGGGQVRKGTQVDCLFGDEYFRGKVDDTDCGGSSYRVIFDDGDVREDAPPEDLELPLEQGCRVECMFEGEDGYFDGIISIDNGDATYKVDFDDGDVLDAAPRHDIHVLSWPHEESAPSSAMTAEDNSTNVAEQEGKGFDTRYSDRSHNKAESEGNREVQKDGENSKGISAAYGELPPGEATHDSPHRSQPSSEVDGSEDGCGRARDEKAGTSQH--------------------------------------------------GSTR---RDLGSSSGEPQRRHDSWTGRESRGTPSNRNEPTTELVQASSLYVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAVLEEQLRQQ------------EARGEAWHLPVFSAETPLHPADPSLRGRPERQGESNPEQ----APGSGGEGSPRATTARGGAAAPSFPAHAELRKVAEDLSTLRMKQARG---------------------THPDFSR-------RLCYGDASLEMVQAIADLADGYAKEDLWPQASNSIV------------------------------------------------------------SNHMARAADILARDKGSRFPGNGLFLTAPPRGGTYVNPRLRFEGHSGLRGDEPRGACTEGPRARGLAFPTENR----YSDPALCRSLTPARSARLLLELVKGLRLSVVEGGERGQVEREKFEVFISTHKDKALRSARPRLLVEAQMPSNCGWGAALGCLRRYSPFFADLNLKI 611
            MKA+GGGQVRKGT+VDCLFGDEYFRGKVDDTD GGSSYRVIFDDGD+REDAPPEDLE+PLEQGCRVECMFEGEDGYFDG+IS DNGDATYKVDFDDGDVLDAAPRHDI VLSWPHEES P++A+TAEDN TNV EQEGK  DT YS+RSHN+AESEGNRE QK+ +NSKGISAA+GELPP E THD PHR Q  SEV GSEDG GR  DE AGTSQH                                                   STR    D GSSSGEPQR HDS TGR   GTPSNR+EPT ELVQA SLYVPTSPNPLHAHLEALAAAAP LLAEAPPDFRLSA SHRIA LEEQLRQQ            EARGEAWHLPVFSA+TPLHPADPSL GRPERQG S PEQ    A GSGGEGS RAT ARGGAAAPSFPAH ELR+V EDLSTLRMKQAR                      +   FS        RLCYGDASLEMVQAIADLADGYAKEDLWPQASNS+V                                                            SNHMARAADILARDKGSRFPG G F+ A P GGTYV+PRLRFE HSGLRGDEPRG CTEG RARGLAFPTENR    YSDPALCRS+TPAR+ARLLLEL+KGLRLSVVEGGERGQVEREKFEVF+STH+DKALRSARPRLL+EAQMP NCGWGAALGCLRR SPFF DLNLK+
Sbjct:    1 MKAEGGGQVRKGTRVDCLFGDEYFRGKVDDTDGGGSSYRVIFDDGDIREDAPPEDLEIPLEQGCRVECMFEGEDGYFDGVISTDNGDATYKVDFDDGDVLDAAPRHDIRVLSWPHEESVPTNAVTAEDNYTNVTEQEGKALDTGYSNRSHNEAESEGNREAQKNDDNSKGISAAHGELPPREETHDPPHRPQRFSEVGGSEDGYGRTGDEPAGTSQHXXXXXXXXXXXXXXXXXXXXSVNYGDNGIAQETRDCDFGHDICSRVKETRSSTRSGEEDPGSSSGEPQRNHDSCTGRNLWGTPSNRDEPTAELVQAPSLYVPTSPNPLHAHLEALAAAAPHLLAEAPPDFRLSATSHRIAALEEQLRQQVGGVLWPCGKGGEARGEAWHLPVFSAKTPLHPADPSLCGRPERQGRSIPEQVSAEATGSGGEGSSRATKARGGAAAPSFPAHTELRQVVEDLSTLRMKQARSAQLAPVKLMAARETVAAAIMMSRSVFSYIAQIALVRLCYGDASLEMVQAIADLADGYAKEDLWPQASNSVVVGLSTLHRERSRSTRVHPSWVVRRAKRQGEDSVMPLFQVGDEEPTEVLAAVPSVDELLQVSNHMARAADILARDKGSRFPGTGFFIAATPGGGTYVDPRLRFEEHSGLRGDEPRGGCTEGQRARGLAFPTENRCCARYSDPALCRSITPARAARLLLELLKGLRLSVVEGGERGQVEREKFEVFLSTHEDKALRSARPRLLLEAQMPGNCGWGAALGCLRRNSPFFNDLNLKV 772          
BLAST of mRNA_Ecto-sp13_S_contig1974.6377.1 vs. uniprot
Match: A0A6H5J7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7A2_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.230e-41
Identity = 78/87 (89.66%), Postives = 82/87 (94.25%), Query Frame = 0
Query:  778 AEIEERTRQALVTYRSKILTRELGGKEKELDTAEDYLVRAWEILESRHGRNDPDVGAACISLGNLAIIRRRLNEAIDWFRRALGTFE 864
            ++IEERT QALV YRSK+LTRELGGK KELDTAEDYLVRAWEILESR GRNDPDVGAACISLGNLA+IRRRLNEAIDWFRRAL TFE
Sbjct:   19 SQIEERTWQALVAYRSKVLTRELGGKGKELDTAEDYLVRAWEILESRQGRNDPDVGAACISLGNLAVIRRRLNEAIDWFRRALETFE 105          
BLAST of mRNA_Ecto-sp13_S_contig1974.6377.1 vs. uniprot
Match: A0A835Z0D6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 6.430e-23
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 0
Query:   14 QVDCLFGD-EYFRGKVDDTDCGGSSYRVIFDDGDVREDAPPEDLELPLEQGCRVECMFEGEDGYFDGIISIDNGDATYKVDFDDGDVLDAAPRHDI 108
            +VDCLF D EY+RG V   +  G+ YR++FDDGD+R DAP  DL  PL  G RV C F  E  YF G+I  DNGD TY + +DDGD L++A R DI
Sbjct:   10 RVDCLFDDGEYYRGSVAAANADGT-YRIVFDDGDIRHDAPLSDLLSPLLPGTRVSCYFPSEADYFPGVIGADNGDGTYHIRYDDGDELESASRRDI 104          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1974.6377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FKD5_ECTSI0.000e+088.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCV6_9PHAE0.000e+068.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7A2_9PHAE1.230e-4189.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z0D6_9STRA6.430e-2354.17Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 296..316
NoneNo IPR availableGENE3D2.30.30.140coord: 57..110
e-value: 8.8E-9
score: 36.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 779..864
e-value: 1.4E-7
score: 32.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 805..860

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1974contigEcto-sp13_S_contig1974:822..10810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1974.6377.1mRNA_Ecto-sp13_S_contig1974.6377.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1974 822..10810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1974.6377.1 ID=prot_Ecto-sp13_S_contig1974.6377.1|Name=mRNA_Ecto-sp13_S_contig1974.6377.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=864bp
MKAKGGGQVRKGTQVDCLFGDEYFRGKVDDTDCGGSSYRVIFDDGDVRED
APPEDLELPLEQGCRVECMFEGEDGYFDGIISIDNGDATYKVDFDDGDVL
DAAPRHDIHVLSWPHEESAPSSAMTAEDNSTNVAEQEGKGFDTRYSDRSH
NKAESEGNREVQKDGENSKGISAAYGELPPGEATHDSPHRSQPSSEVDGS
EDGCGRARDEKAGTSQHGSTRRDLGSSSGEPQRRHDSWTGRESRGTPSNR
NEPTTELVQASSLYVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAIS
HRIAVLEEQLRQQEARGEAWHLPVFSAETPLHPADPSLRGRPERQGESNP
EQAPGSGGEGSPRATTARGGAAAPSFPAHAELRKVAEDLSTLRMKQARGT
HPDFSRRLCYGDASLEMVQAIADLADGYAKEDLWPQASNSIVSNHMARAA
DILARDKGSRFPGNGLFLTAPPRGGTYVNPRLRFEGHSGLRGDEPRGACT
EGPRARGLAFPTENRYSDPALCRSLTPARSARLLLELVKGLRLSVVEGGE
RGQVEREKFEVFISTHKDKALRSARPRLLVEAQMPSNCGWGAALGCLRRY
SPFFADLNLKIMEGMQQKQAAKVRLAFQAVDPDGTGCAEAEILALMVADD
EEDKVVEGGVGTARQRLRSLLHIRVQTLTGRCETHTNRLPAACRNLSEAL
AELERLGLGEACSSVQVLNALTDALALTHQRHQEISSIKAKKLAETWIQG
KEGQDLWKQECKRLVLECRRRLEVVPRAEIEERTRQALVTYRSKILTREL
GGKEKELDTAEDYLVRAWEILESRHGRNDPDVGAACISLGNLAIIRRRLN
EAIDWFRRALGTFE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf