mRNA_Ecto-sp13_S_contig1962.6323.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1962.6323.1
Unique NamemRNA_Ecto-sp13_S_contig1962.6323.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: D7G2Q6_ECTSI (V-type proton ATPase subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Q6_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 2.070e-192
Identity = 284/291 (97.59%), Postives = 289/291 (99.31%), Query Frame = 2
Query:    2 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTAYVSDKFSIVAAK 874
            QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGK QEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQR+EEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVK+ALS+LY+HVSQLSSGPITAGGGEDD DKDD+DTAYVSDKFSIVAAK
Sbjct:  148 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKPQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRVEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKEALSALYAHVSQLSSGPITAGGGEDDGDKDDDDTAYVSDKFSIVAAK 438          
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A835Z1N8_9STRA (V-type proton ATPase subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N8_9STRA)

HSP 1 Score: 326 bits (836), Expect = 4.630e-101
Identity = 165/289 (57.09%), Postives = 214/289 (74.05%), Query Frame = 2
Query:    2 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTAYVSDKFSIVA 868
            QALKRKK  NL T +LSEVL+ ++LR + +V+T++L TL VA+ K QE  WL+ Y  IG++IA++GSPDWS P+    LG+ +GQ GP FS R   KGSPV+PGST K++E+G+  LYTVTVL+GQYQAGF DGEQFQ GM  DYV  FK+  KEKRFTA+DF F+PER GE +R   QLK E QQLHAGM+RWC+AHFGEA  AWMH+KL++ +VESV+RYGLPVDFS  ++   KG+EA V  AL  LY++V+ L  GP      +D  DKD E  A+V++ F++++
Sbjct:  157 QALKRKKQANLMTADLSEVLTEDKLRHITLVETDHLTTLIVAVNKNQESAWLDTYHQIGADIAAMGSPDWSAPANRAQLGSINGQHGPEFSQRTATKGSPVIPGSTVKIMEDGDACLYTVTVLKGQYQAGFFDGEQFQPGMQVDYVDAFKKAAKEKRFTAKDFKFDPERAGELEREANQLKLEAQQLHAGMLRWCKAHFGEAMIAWMHIKLIRGFVESVLRYGLPVDFSTLLVECAKGKEAAVTKALDGLYANVAAL--GPQHTPHKDDKEDKD-EYHAFVANAFALLS 442          
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A6V1R0R9_HETAK (V-type proton ATPase subunit C n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R0R9_HETAK)

HSP 1 Score: 245 bits (626), Expect = 2.920e-70
Identity = 130/293 (44.37%), Postives = 185/293 (63.14%), Query Frame = 2
Query:    2 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE--QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDT-AYVSDKFSIVAA 871
            QAL+RKKG NL   +L++VL++E+L GV   DTE+L T+ V + K  ++++ EGYE +G+EI + G PDW++  VA  LG  DG FGP  S+R   +GSPVVPGS Q VL EG+ +LY +TVL+G Y+AGF D    +FQ G   +Y  E     K  +FT R F F+P+  G   R   QL  EV QLH+G+ RWCRAH+ EA  AW+H+K+++++VES++RYGLP +F A VL  +   E +++ AL  +++HV     G    GG     D+ +E    +V  KF + AA
Sbjct:  153 QALQRKKGGNLLVADLADVLTAERLEGVPFHDTEHLHTVVVVLNKQNQREFEEGYERLGAEIGAFGGPDWTDEKVAAGLGRDDGNFGP-ESARAARRGSPVVPGSAQLVLREGDYLLYAMTVLKGHYEAGFVDEATGEFQPGRRVEYFEELAAAAKNLKFTVRRFTFDPDAAGAGDRKARQLDYEVDQLHSGIGRWCRAHYPEALEAWVHLKVIRAFVESILRYGLPRNFCALVLRPRPRMEGRLERALQGMFAHVG----GGALGGGAVAAVDEGEERLETFVCQKFQLQAA 440          
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A067CU70_SAPPC (V-type proton ATPase subunit C n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU70_SAPPC)

HSP 1 Score: 224 bits (571), Expect = 1.110e-62
Identity = 121/286 (42.31%), Postives = 178/286 (62.24%), Query Frame = 2
Query:   14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTAYVSDKFSIVA 868
            +KK  NL    L++VL+ + ++    V+TE L TL V + K+QE+ WL  YE+IG++IA                     ++GP   SRG +KGSPVVPGS++K++EEG+  LYTVT+L+GQYQ+G  D +  F+AG   DYV +FK   +EKRF ARDF ++P     N+ M  +L+ EV +L+ G++RWC+AHFGE F AWMHVK V+++VE+V+RYGLPV+F+A +   K G+E K++  L   Y H+       +      ++A    E  AYVS+ F+ +A
Sbjct:  153 KKKSGNLLVANLTDVLTPDVVKATDFVNTEYLQTLVVVVPKSQEEVWLREYETIGNDIA---------------------EYGP-KQSRGSLKGSPVVPGSSRKLIEEGDSTLYTVTILKGQYQSGSFDNDGTFEAGTLLDYVDKFKNAAREKRFQARDFTYDPTAHATNETMIAELEVEVNRLYTGLLRWCKAHFGETFIAWMHVKAVRTFVEAVLRYGLPVNFTAILYRLKAGKEKKLRTVLEKRYEHLQPSQFASV------EEAANAQEYFAYVSNSFNPLA 410          
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A485LS38_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS38_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.590e-62
Identity = 116/251 (46.22%), Postives = 164/251 (65.34%), Query Frame = 2
Query:   14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHV 763
            +KKG NL    L+++L+ + ++    V++E L TL V + K+QE+ WL  Y +IG++IA                     +FGP   SRG VKGSPVVP S++K+LEEGE  LYTVT+L+GQYQ+G +D E  F+AG   DYV +FK   +EKRFTARDF F+P     N+ M  +L+ EV +L+ G++RWC+AHFGE F AWMHVK ++ +VESV+RYGLPV+F A +   K G+E ++++ L   Y H+
Sbjct:  153 KKKGGNLLVANLTDILTPDIVKTSDFVNSEYLQTLVVVVPKSQEEVWLNEYATIGADIA---------------------EFGP-KQSRGAVKGSPVVPNSSRKLLEEGEACLYTVTILKGQYQSGAYDSEGNFEAGTLLDYVEKFKLAAREKRFTARDFTFDPTSHATNETMIAELEVEVNRLYTGLLRWCKAHFGETFIAWMHVKAIRVFVESVLRYGLPVNFVALLYKPKSGKEKRLREVLEKRYGHL 381          
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A024UHQ9_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHQ9_9STRA)

HSP 1 Score: 222 bits (565), Expect = 8.520e-62
Identity = 114/251 (45.42%), Postives = 164/251 (65.34%), Query Frame = 2
Query:   14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHV 763
            +KKG NL    L+E+L+ + ++    V+TE L TL V + K+QE+ WL+ Y +IG  IA                     ++GP   SRG VKGSPVVP S++K+LEEG+  LYTVT+L+GQYQ+G +D +  F+ G   DYV +FK+  +EKRFTARDF F+P     N+ M  +L+ EV +L++G++RWC+AHFGE F AWMH+K V+++VESV+RYGLPV+F A +   K G++ K++  L   Y H+
Sbjct:  153 KKKGGNLLVTNLAEILTPDIVKTSDFVNTEYLQTLVVVVPKSQEEVWLQEYATIGDGIA---------------------EYGP-KQSRGTVKGSPVVPNSSRKLLEEGDACLYTVTILKGQYQSGSYDQDGNFEPGTLLDYVEKFKQAAREKRFTARDFTFDPTSHATNETMVAELEVEVNRLYSGLLRWCKAHFGETFIAWMHIKAVRTFVESVLRYGLPVNFVALLYKVKNGRDKKLRQVLDKRYEHL 381          
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A812W2U7_SYMMI (V-type proton ATPase subunit C (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W2U7_SYMMI)

HSP 1 Score: 218 bits (556), Expect = 5.070e-61
Identity = 123/290 (42.41%), Postives = 176/290 (60.69%), Query Frame = 2
Query:    5 ALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDF-SAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTA-YVSDKFSIVA 868
            A++RKK  NL T +L + L ++       V++E LVTL V +    E    + YE IG++IA+ G PDWS       LG  DG FGP   +RG V+GSPVVPGS  K+  EGE  LY+VTVL+G Y+AG+ +G +F  G   DY    K   +EKRFT R+F+F+P + G      +Q K EVQQ    ++RWCRAHFGE FS WMH+K+VK +VESV+RYGLPVDF S FV    K ++ +++   + ++   ++L++    A G ++    D+ D+  +V  +F+  A
Sbjct:   84 AVQRKKTTNLITSDLEDFLPADTPSKFEFVNSEYLVTLLVVVPGPVEAG--KSYEDIGADIAAYGGPDWSASFNPAGLGKDDGNFGP-EGNRGRVRGSPVVPGSATKIFSEGESHLYSVTVLKGHYEAGYFEGSEFVPGKFVDYSDAVKNASREKRFTVREFVFDPSKAGGVDGQIDQAKWEVQQTLTTIVRWCRAHFGEVFSGWMHLKVVKGFVESVLRYGLPVDFLSVFVEPNMKREKQQLQTLKTGIFKMRTELAANDWEADGDDNKDGNDESDSLPFVFHRFNATA 370          
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: W4H5I3_9STRA (V-type proton ATPase subunit C n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5I3_9STRA)

HSP 1 Score: 217 bits (553), Expect = 4.340e-60
Identity = 115/251 (45.82%), Postives = 162/251 (64.54%), Query Frame = 2
Query:   14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHV 763
            +KKG NL    L+++L+ + ++    V+TE L TL V + K+QE  WL+ Y SIG +IA                     +FGP  S RG VKGSPVVP S++K+LEEG+  LYTVT+L+GQYQ+G +D +  F+ G   DYV +FK   +EKRF ARDF F+P     N+ +  +L+ EV +L++G++RWC+AHFGE F AWMHVK V+ +VESV+RYGLPV+F A +   K G++ K++ AL   Y H+
Sbjct:  153 KKKGGNLLVTNLADILTPDIVKTSDFVNTEYLQTLVVVVPKSQEAVWLQEYTSIGDDIA---------------------EFGPKHS-RGNVKGSPVVPHSSRKLLEEGDACLYTVTILKGQYQSGSYDQDGNFEPGTLLDYVEKFKLAAREKRFMARDFTFDPTSHATNETLVAELEVEVNRLYSGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAMLFKPKAGRDKKLRQALDKRYEHL 381          
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A6G0WZK4_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZK4_9STRA)

HSP 1 Score: 217 bits (553), Expect = 4.340e-60
Identity = 118/286 (41.26%), Postives = 172/286 (60.14%), Query Frame = 2
Query:   14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTAYVSDKFSIVA 868
            +KKG NL    L+++L+ + ++    ++TE L TL V + K+QE+ W+  Y +IG +IA                     +FGP   SR  V+GSPVVP S++K+LEEG+  LYTVT+L+GQYQ+G +D +  F+AG   DYV +FK   +EKRFTARDF F+P     N+ M  +L+ EV +L+ G++RWC+AHFGE F AWMHVK V+ +VESV+RYGLPV+F A +   K G++ K++  L   Y H+       +    G        E   YVS+ F+ ++
Sbjct:  153 KKKGGNLLVTNLADILTPDIVKTSDFINTEYLQTLVVVVPKSQEEVWISSYSTIGEDIA---------------------EFGP-KQSRSSVRGSPVVPNSSRKLLEEGDACLYTVTILKGQYQSGTYDQDGNFEAGSLLDYVEKFKHAAREKRFTARDFTFDPTSHATNETMIAELEVEVNRLYTGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAVLYKPKAGKDKKLRQYLDKRYEHLQPAQFAAVEDAAGASSV----EYYPYVSNSFTPLS 412          
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: K0TGY8_THAOC (V-type proton ATPase subunit C (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGY8_THAOC)

HSP 1 Score: 220 bits (561), Expect = 3.330e-59
Identity = 121/276 (43.84%), Postives = 176/276 (63.77%), Query Frame = 2
Query:    2 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWS-NPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARD-FIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKD 823
            Q  KRK+G NL T +L++VL  + +R V + DTE L TL VA+ +   +++     ++GSE+   G PDWS NP+    LG+ +  FG G    G  KGSPVVPGS +KV E+ E VL+ VTVL+G Y+AG+++G++F  G  TD V +F R  +EKR++ R+ F+++P + G++    EQL+ EV  + +G+ RWC+ H+GEAF AWMHVK+++ +VESV+RYGLPVDF+A +     G+EAK+  AL   +              G EDDAD D
Sbjct:  359 QDAKRKRGGNLMTADLNDVLDEKVMRNVSVKDTEYLRTLFVAVPRAAVENFTADVYTLGSELVGYGGPDWSGNPA---GLGSAE-NFGQGVDRHGK-KGSPVVPGSLEKVTEDSESVLFAVTVLKGMYEAGYYEGDEFVPGTKTDLVGDFARILREKRYSVRESFVYDPSQQGKSALALEQLQVEVDNMRSGLTRWCKTHYGEAFVAWMHVKVIRVFVESVLRYGLPVDFTAVLYKVGSGKEAKLVGALDKAFGDDK----------GKEDDADDD 619          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q6_ECTSI2.070e-19297.59V-type proton ATPase subunit C n=2 Tax=Ectocarpus ... [more]
A0A835Z1N8_9STRA4.630e-10157.09V-type proton ATPase subunit C n=1 Tax=Tribonema m... [more]
A0A6V1R0R9_HETAK2.920e-7044.37V-type proton ATPase subunit C n=1 Tax=Heterosigma... [more]
A0A067CU70_SAPPC1.110e-6242.31V-type proton ATPase subunit C n=4 Tax=Saprolegnia... [more]
A0A485LS38_9STRA1.590e-6246.22V-type proton ATPase subunit C n=1 Tax=Aphanomyces... [more]
A0A024UHQ9_9STRA8.520e-6245.42V-type proton ATPase subunit C n=1 Tax=Aphanomyces... [more]
A0A812W2U7_SYMMI5.070e-6142.41V-type proton ATPase subunit C (Fragment) n=1 Tax=... [more]
W4H5I3_9STRA4.340e-6045.82V-type proton ATPase subunit C n=2 Tax=Aphanomyces... [more]
A0A6G0WZK4_9STRA4.340e-6041.26V-type proton ATPase subunit C n=1 Tax=Aphanomyces... [more]
K0TGY8_THAOC3.330e-5943.84V-type proton ATPase subunit C (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1962contigEcto-sp13_S_contig1962:492..4353 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score513.8
Seed ortholog evalue4.6e-143
Seed eggNOG ortholog2880.D7G2Q6
Preferred nameATP6V1C2
Model size2133
KEGG koko:K02148
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000041,GO:0000221,GO:0000322,GO:0000323,GO:0000324,GO:0000325,GO:0000329,GO:0000331,GO:0000902,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006885,GO:0007035,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007292,GO:0008104,GO:0008150,GO:0008286,GO:0008324,GO:0008553,GO:0009507,GO:0009536,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009826,GO:0009894,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010506,GO:0010646,GO:0010647,GO:0012505,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015682,GO:0015833,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016241,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019725,GO:0019829,GO:0019953,GO:0022414,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030003,GO:0030004,GO:0030111,GO:0030177,GO:0030641,GO:0030728,GO:0031090,GO:0031164,GO:0031224,GO:0031323,GO:0031329,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032868,GO:0032869,GO:0032870,GO:0032989,GO:0032991,GO:0033036,GO:0033176,GO:0033178,GO:0033180,GO:0033181,GO:0033572,GO:0034220,GO:0036442,GO:0040007,GO:0042221,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044769,GO:0045177,GO:0045184,GO:0045851,GO:0046961,GO:0046983,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048589,GO:0048609,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051704,GO:0051716,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0060560,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072512,GO:0090662,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902600
Exons5
EggNOG free text desc.proton-exporting ATPase activity, phosphorylative mechanism
EggNOG OGsCOG5127@1,KOG2909@2759
Cds size792
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1962.6323.1prot_Ecto-sp13_S_contig1962.6323.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1962 577..3097 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462992.3372695-UTR-Ecto-sp13_S_contig1962:491..5761681462992.3372695-UTR-Ecto-sp13_S_contig1962:491..576Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1962 492..576 +
1681462992.399421-UTR-Ecto-sp13_S_contig1962:3097..43531681462992.399421-UTR-Ecto-sp13_S_contig1962:3097..4353Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1962 3098..4353 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462992.3483675-CDS-Ecto-sp13_S_contig1962:576..6721681462992.3483675-CDS-Ecto-sp13_S_contig1962:576..672Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1962 577..672 +
1681462992.3570657-CDS-Ecto-sp13_S_contig1962:1200..14041681462992.3570657-CDS-Ecto-sp13_S_contig1962:1200..1404Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1962 1201..1404 +
1681462992.3655612-CDS-Ecto-sp13_S_contig1962:1798..19511681462992.3655612-CDS-Ecto-sp13_S_contig1962:1798..1951Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1962 1799..1951 +
1681462992.37596-CDS-Ecto-sp13_S_contig1962:2483..26721681462992.37596-CDS-Ecto-sp13_S_contig1962:2483..2672Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1962 2484..2672 +
1681462992.3845994-CDS-Ecto-sp13_S_contig1962:2947..30971681462992.3845994-CDS-Ecto-sp13_S_contig1962:2947..3097Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1962 2948..3097 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1962.6323.1

>prot_Ecto-sp13_S_contig1962.6323.1 ID=prot_Ecto-sp13_S_contig1962.6323.1|Name=mRNA_Ecto-sp13_S_contig1962.6323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
MMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYS
LGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQ
AGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEE
QLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDF
SAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDT
AYVSDKFSIVAAK*
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mRNA from alignment at Ecto-sp13_S_contig1962:492..4353+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1962.6323.1 ID=mRNA_Ecto-sp13_S_contig1962.6323.1|Name=mRNA_Ecto-sp13_S_contig1962.6323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3862bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1962:492..4353+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCAGGCGCTGAAGCGCAAGAAGGGCAACAACCTTGCCACGGTGGAGCTAT CGGAGGTACTGTCGAGCGAGCAGCTGCGGGGGGTGATGATGGTGGACACG GAGAACCTGGTGACGCTCGCCGTGGCCATGGGCAAGACCCAGGAGAAGGA CTGGCTCGAGGGGTACGAGTCCATCGGAAGCGTGAGTGCTTGCGGGTAGA CGGACGGTCGGGTGGCACAACATTACAGACGAGAAGGGGGATAATATGCG TAGACGAGAGAGAGTTGCCGTCCTTGTAGGTTAGCGAAGGGCGAAGACCA GTGGATGCAGAAGAGCATCGTTATTCTCACCGCTGGATACGGCAAGGACA AGTTGTGCCATATTTCATCCTCTTTTTTTCCCACGCGTCGGTCGGCGTTC GCACCCTCTTGGATTTCGGACAGTCGATCGAGAGCTTTGAAAGTCAGTTT TGTGTGTGTGCGATCACTCAGTACCGACCGGGTGGCGATTAACTACACGA GGGTTGTCATGGCCTCTACCTTCAAGCCAGGAGACGAAGGAGGATCAGGA AGCATGAACCAAAAGAGCCGTAGGCGTACGGGGAGCTCGAGGCATATCTT GCTTCATCAGTTTCGGATTGATTTTCTTCGCGAACGGCACCTATCTGCCG CCTTCTCTAGACCAAGCCTCATTGCGAGCACCGCACGCATTTGTTCCTTG CTGCTGCAGGAAATTGCTTCTCTCGGCAGCCCGGACTGGTCCAACCCTAG CGTAGCGTACAGCCTCGGCACCCAAGACGGGCAGTTCGGCCCCGGGTTTT CCAGCAGGGGCGTCGTGAAAGGGTCTCCCGTTGTGCCCGGCTCCACCCAG AAGGTGTTGGAGGAGGGGGAGCAGGTCCTCTACACCGTTACGGTGCTCAG AGGGCAATACCAGGTGTGGATGTTCGCTTGGTGGGTGTCTGCGAGATATG TTGTTCACAGTTATTGACTCGTTTGGACCCTTGGCAAAACTGCGGGAATA GACACTTAGCATCCGCTCAAAACGCAGTACCAGGTTGTGGTGGTGTTGCC GTTTTTGATGGCCAAGCACTTTTGTAGGGATAAGGCGAAAGCACATGAGA TGCACCACGTTGGTAAATTCCAAGCCATGTTTTCCTACCATGCACAATAT TTGTAGGTCCAACGCGAGCCTTTGGTTTTTGTCCATAGAGCAGTGGCATG GGTTTTATTTTGAGGGAGGAATGTGATGCACGTCCTTCGCGTGTTGTGTT GTGGCCAACCACCATGCACGCAACAACGCCTTACAATAACGCCTCCGAAT CCTTCAGGCGGGGTTCCACGACGGGGAGCAGTTCCAGGCGGGCATGTCGA CGGACTACGTGGCGGAGTTTAAGCGGAAGTGCAAGGAGAAGCGATTCACG GCTCGCGATTTCATCTTTAACCCGGAGAGGACTGGGGAAAACCAGCGCAT GGAGGAGCAGGTCGGTTTTGATATGCATGCTATACCGCGGTCCTCCTGCT GCTGCTGACGTAGCTTCATGGGGGAAGGTTGCTATCCATGTGCTTCTCTG TATTGTACCACGTCTAGTAGGACCTCAAAGGTTACGTACACGGGCAATTT CGCTCGGATAGCTTTTGGGTTGTGCATGGGTATGCTCAGCGGTTGGTTTG CCGCCGATGATGACTGGAGCGTGTGTATTAGTGCATCGGAAGAAGATTAG GACAGAGGAGAGTACCCTACTGGTTGCTGTGCTGCCACCTGTAGCTCGCA CGTTTCTCTTTTGCCGACCCATTCTAGCTCAGTCTGCGCATGACAATCGC CCTCTGGTTGTGCACGAATCACTCGCGACGTTTTAGCTGTTTCCGCCTTT TCCCCCCTCCTTCCCCCGTCGCCACTGCCTCGTTCGCCAGTACTCTTAGC CTTGGCTGAAGACATCACCATCTGAATTTTAACAAATCAACCGCCATTTT GGTGTCTGCACCTTGCCTGCCCGCTTTCTCCGTCCACGTTAGCTCAAGAC GGAGGTACAGCAGTTGCACGCGGGCATGATCCGGTGGTGCCGCGCCCACT TCGGGGAGGCGTTCTCGGCGTGGATGCACGTCAAGCTCGTCAAGTCGTAC GTAGAGAGCGTCATGCGCTACGGGCTCCCGGTAGACTTCTCGGCCTTCGT ACTCGCGACAAAGAAGGGACAGGAAGCCAAGGTGAGTCGGTGTGGTGTGT GTTTTGATCGTCTCTTTTTAAGCGAGTGTTGTTGATGTGGTCCAAGGTTC ATCGTTCCACCTGGCGGTGTTTGTGGTTGATCAAACAGTCGCAGCGTGAT GTTTACCCCCCCTCCATCCGTTGGCCCTTTCCTCGCTCCCTGTAAGGTAA CTCGGGTCGTAAGCACGAGCTGTCACCACGTGCATGCCCCCACGCTTCGC CCGCTAACCCTTGTTGCACTCCCTCGTGTGAACGACAACAACAATCAACA CCGCAGGTGAAGGACGCGCTCAGCTCGCTCTACTCCCATGTCTCTCAGCT CAGCTCCGGGCCCATCACGGCCGGGGGCGGAGAGGACGACGCGGACAAGG ACGATGAAGACACCGCGTACGTATCCGATAAGTTCTCGATCGTGGCGGCC AAGTAGAAGAGTGGTAAGCAACAAGCAACTTAGGCGCCGGGAAGCAGTTG GGAAGGCTGCTGATCCTGCTGCTGCTTACTGCTGCTCCGTGGTGCGGCAG CTGCTTGCTGCTGCTTGCTGTTGCTAGCTGCTTGCTGCTTGCTGCTGCTG CTCCCGTTGTTGTAGTGCCGTGCAGCAGCGTCGGTGCTGCAAGGTGTGCC GCGTTTTGCGGTACACGACAACAGGCTAACTCACCTGTTTGGCGTGCTGT GGTATGCGGTACCGAGCATGCGCTACCACCACCGTGATTTGCCCCTGTTG CACGCAATTCTGTCGGTGGCGTAGACGATCCGTGGTATGGGCACCGTGCG TAGGATCGCCCGCACTTGTGCCTGCTAGTTTTAGATTGCCTTGAGCCTTT TTCGGCGGGGGCGAGATGGGTGGTGTCGTGCTGGGTCGGGGGCTCCCTTG TACAAGTTTTGGGATTTTATGTGTCATTTGGAGTTTCTTTTTTCCTTTGG TTGGCCAGGAAAACAGAAGGGGCGTTGAGATAGTACGCGCCCAACCTTTC GAAGGCGACGGTATTGTTGGAGGAGTGCTGCATGGGTGTACTCGATCGAG GAGAAAAGAGTCGAGCTTGTCGTAGACAAAACAAGGTGGGGACTATGAGG AGGGTGATTATGTTTTTGCCTCCCTTGTAACGATTCGGTTTGGGTCGAGC GAAAATGTTGCGTGCGCGAGGAGGAAACGATTCTTGTCGTCGATGGCCGA TTTCTGAGGCCAGTCACTGACCACCCGTTCACGTTTGATCTAGGACAGCT ATTCTTCATTTCCCCCAACCCTGGTGATCTTGACGATGCGTTTTGAGGTT CTGCTGTATCTCGAGGACATGGGAGGCAGTCGCTGGGCGAGGATGGAGGA TGGACTGGAGTCGAGGCTGTTTCCTCCGTTTTGGTCGAAACTTGCATAGC TGGGTGTGTGGGATAGGATCTAGCATTAAGTTTGCTTCACGCGCGCGAGT TTTTTTCGCTTATGTATTTTTTGTGTGTGTCATGTCACCCACAGCCTCGT TGGCTCAGACAAAATAATTGGGGAGAGGCGGCTCCTCGGGCATATTCCGT ACTTTCGGTTTGTAGACGTGTCCTTTCGAGACGACGAAGAGAACCGGTCT ATGTATTGTTCAGAAGGTGTGTTCCTCCTGCCACCGAGCATCGCATTGAA GCACAAAGCTACAGCAGTGGCCATCAATGAAGTGGCTACTTCGTGTTCTC AGTCAGTTCCAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1962:492..4353+

>mRNA_Ecto-sp13_S_contig1962.6323.1 ID=mRNA_Ecto-sp13_S_contig1962.6323.1|Name=mRNA_Ecto-sp13_S_contig1962.6323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1962:492..4353+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGTGGACACGGAGAACCTGGTGACGCTCGCCGTGGCCATGGGCAA
GACCCAGGAGAAGGACTGGCTCGAGGGGTACGAGTCCATCGGAAGCGAAA
TTGCTTCTCTCGGCAGCCCGGACTGGTCCAACCCTAGCGTAGCGTACAGC
CTCGGCACCCAAGACGGGCAGTTCGGCCCCGGGTTTTCCAGCAGGGGCGT
CGTGAAAGGGTCTCCCGTTGTGCCCGGCTCCACCCAGAAGGTGTTGGAGG
AGGGGGAGCAGGTCCTCTACACCGTTACGGTGCTCAGAGGGCAATACCAG
GCGGGGTTCCACGACGGGGAGCAGTTCCAGGCGGGCATGTCGACGGACTA
CGTGGCGGAGTTTAAGCGGAAGTGCAAGGAGAAGCGATTCACGGCTCGCG
ATTTCATCTTTAACCCGGAGAGGACTGGGGAAAACCAGCGCATGGAGGAG
CAGCTCAAGACGGAGGTACAGCAGTTGCACGCGGGCATGATCCGGTGGTG
CCGCGCCCACTTCGGGGAGGCGTTCTCGGCGTGGATGCACGTCAAGCTCG
TCAAGTCGTACGTAGAGAGCGTCATGCGCTACGGGCTCCCGGTAGACTTC
TCGGCCTTCGTACTCGCGACAAAGAAGGGACAGGAAGCCAAGGTGAAGGA
CGCGCTCAGCTCGCTCTACTCCCATGTCTCTCAGCTCAGCTCCGGGCCCA
TCACGGCCGGGGGCGGAGAGGACGACGCGGACAAGGACGATGAAGACACC
GCGTACGTATCCGATAAGTTCTCGATCGTGGCGGCCAAGTAG
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