mRNA_Ecto-sp13_S_contig1962.6323.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: D7G2Q6_ECTSI (V-type proton ATPase subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Q6_ECTSI) HSP 1 Score: 560 bits (1444), Expect = 2.070e-192 Identity = 284/291 (97.59%), Postives = 289/291 (99.31%), Query Frame = 2
Query: 2 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTAYVSDKFSIVAAK 874
QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGK QEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQR+EEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVK+ALS+LY+HVSQLSSGPITAGGGEDD DKDD+DTAYVSDKFSIVAAK
Sbjct: 148 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKPQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRVEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKEALSALYAHVSQLSSGPITAGGGEDDGDKDDDDTAYVSDKFSIVAAK 438
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A835Z1N8_9STRA (V-type proton ATPase subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N8_9STRA) HSP 1 Score: 326 bits (836), Expect = 4.630e-101 Identity = 165/289 (57.09%), Postives = 214/289 (74.05%), Query Frame = 2
Query: 2 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTAYVSDKFSIVA 868
QALKRKK NL T +LSEVL+ ++LR + +V+T++L TL VA+ K QE WL+ Y IG++IA++GSPDWS P+ LG+ +GQ GP FS R KGSPV+PGST K++E+G+ LYTVTVL+GQYQAGF DGEQFQ GM DYV FK+ KEKRFTA+DF F+PER GE +R QLK E QQLHAGM+RWC+AHFGEA AWMH+KL++ +VESV+RYGLPVDFS ++ KG+EA V AL LY++V+ L GP +D DKD E A+V++ F++++
Sbjct: 157 QALKRKKQANLMTADLSEVLTEDKLRHITLVETDHLTTLIVAVNKNQESAWLDTYHQIGADIAAMGSPDWSAPANRAQLGSINGQHGPEFSQRTATKGSPVIPGSTVKIMEDGDACLYTVTVLKGQYQAGFFDGEQFQPGMQVDYVDAFKKAAKEKRFTAKDFKFDPERAGELEREANQLKLEAQQLHAGMLRWCKAHFGEAMIAWMHIKLIRGFVESVLRYGLPVDFSTLLVECAKGKEAAVTKALDGLYANVAAL--GPQHTPHKDDKEDKD-EYHAFVANAFALLS 442
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A6V1R0R9_HETAK (V-type proton ATPase subunit C n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R0R9_HETAK) HSP 1 Score: 245 bits (626), Expect = 2.920e-70 Identity = 130/293 (44.37%), Postives = 185/293 (63.14%), Query Frame = 2
Query: 2 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE--QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDT-AYVSDKFSIVAA 871
QAL+RKKG NL +L++VL++E+L GV DTE+L T+ V + K ++++ EGYE +G+EI + G PDW++ VA LG DG FGP S+R +GSPVVPGS Q VL EG+ +LY +TVL+G Y+AGF D +FQ G +Y E K +FT R F F+P+ G R QL EV QLH+G+ RWCRAH+ EA AW+H+K+++++VES++RYGLP +F A VL + E +++ AL +++HV G GG D+ +E +V KF + AA
Sbjct: 153 QALQRKKGGNLLVADLADVLTAERLEGVPFHDTEHLHTVVVVLNKQNQREFEEGYERLGAEIGAFGGPDWTDEKVAAGLGRDDGNFGP-ESARAARRGSPVVPGSAQLVLREGDYLLYAMTVLKGHYEAGFVDEATGEFQPGRRVEYFEELAAAAKNLKFTVRRFTFDPDAAGAGDRKARQLDYEVDQLHSGIGRWCRAHYPEALEAWVHLKVIRAFVESILRYGLPRNFCALVLRPRPRMEGRLERALQGMFAHVG----GGALGGGAVAAVDEGEERLETFVCQKFQLQAA 440
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A067CU70_SAPPC (V-type proton ATPase subunit C n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU70_SAPPC) HSP 1 Score: 224 bits (571), Expect = 1.110e-62 Identity = 121/286 (42.31%), Postives = 178/286 (62.24%), Query Frame = 2
Query: 14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTAYVSDKFSIVA 868
+KK NL L++VL+ + ++ V+TE L TL V + K+QE+ WL YE+IG++IA ++GP SRG +KGSPVVPGS++K++EEG+ LYTVT+L+GQYQ+G D + F+AG DYV +FK +EKRF ARDF ++P N+ M +L+ EV +L+ G++RWC+AHFGE F AWMHVK V+++VE+V+RYGLPV+F+A + K G+E K++ L Y H+ + ++A E AYVS+ F+ +A
Sbjct: 153 KKKSGNLLVANLTDVLTPDVVKATDFVNTEYLQTLVVVVPKSQEEVWLREYETIGNDIA---------------------EYGP-KQSRGSLKGSPVVPGSSRKLIEEGDSTLYTVTILKGQYQSGSFDNDGTFEAGTLLDYVDKFKNAAREKRFQARDFTYDPTAHATNETMIAELEVEVNRLYTGLLRWCKAHFGETFIAWMHVKAVRTFVEAVLRYGLPVNFTAILYRLKAGKEKKLRTVLEKRYEHLQPSQFASV------EEAANAQEYFAYVSNSFNPLA 410
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A485LS38_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS38_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.590e-62 Identity = 116/251 (46.22%), Postives = 164/251 (65.34%), Query Frame = 2
Query: 14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHV 763
+KKG NL L+++L+ + ++ V++E L TL V + K+QE+ WL Y +IG++IA +FGP SRG VKGSPVVP S++K+LEEGE LYTVT+L+GQYQ+G +D E F+AG DYV +FK +EKRFTARDF F+P N+ M +L+ EV +L+ G++RWC+AHFGE F AWMHVK ++ +VESV+RYGLPV+F A + K G+E ++++ L Y H+
Sbjct: 153 KKKGGNLLVANLTDILTPDIVKTSDFVNSEYLQTLVVVVPKSQEEVWLNEYATIGADIA---------------------EFGP-KQSRGAVKGSPVVPNSSRKLLEEGEACLYTVTILKGQYQSGAYDSEGNFEAGTLLDYVEKFKLAAREKRFTARDFTFDPTSHATNETMIAELEVEVNRLYTGLLRWCKAHFGETFIAWMHVKAIRVFVESVLRYGLPVNFVALLYKPKSGKEKRLREVLEKRYGHL 381
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A024UHQ9_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHQ9_9STRA) HSP 1 Score: 222 bits (565), Expect = 8.520e-62 Identity = 114/251 (45.42%), Postives = 164/251 (65.34%), Query Frame = 2
Query: 14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHV 763
+KKG NL L+E+L+ + ++ V+TE L TL V + K+QE+ WL+ Y +IG IA ++GP SRG VKGSPVVP S++K+LEEG+ LYTVT+L+GQYQ+G +D + F+ G DYV +FK+ +EKRFTARDF F+P N+ M +L+ EV +L++G++RWC+AHFGE F AWMH+K V+++VESV+RYGLPV+F A + K G++ K++ L Y H+
Sbjct: 153 KKKGGNLLVTNLAEILTPDIVKTSDFVNTEYLQTLVVVVPKSQEEVWLQEYATIGDGIA---------------------EYGP-KQSRGTVKGSPVVPNSSRKLLEEGDACLYTVTILKGQYQSGSYDQDGNFEPGTLLDYVEKFKQAAREKRFTARDFTFDPTSHATNETMVAELEVEVNRLYSGLLRWCKAHFGETFIAWMHIKAVRTFVESVLRYGLPVNFVALLYKVKNGRDKKLRQVLDKRYEHL 381
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A812W2U7_SYMMI (V-type proton ATPase subunit C (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W2U7_SYMMI) HSP 1 Score: 218 bits (556), Expect = 5.070e-61 Identity = 123/290 (42.41%), Postives = 176/290 (60.69%), Query Frame = 2
Query: 5 ALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDF-SAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTA-YVSDKFSIVA 868
A++RKK NL T +L + L ++ V++E LVTL V + E + YE IG++IA+ G PDWS LG DG FGP +RG V+GSPVVPGS K+ EGE LY+VTVL+G Y+AG+ +G +F G DY K +EKRFT R+F+F+P + G +Q K EVQQ ++RWCRAHFGE FS WMH+K+VK +VESV+RYGLPVDF S FV K ++ +++ + ++ ++L++ A G ++ D+ D+ +V +F+ A
Sbjct: 84 AVQRKKTTNLITSDLEDFLPADTPSKFEFVNSEYLVTLLVVVPGPVEAG--KSYEDIGADIAAYGGPDWSASFNPAGLGKDDGNFGP-EGNRGRVRGSPVVPGSATKIFSEGESHLYSVTVLKGHYEAGYFEGSEFVPGKFVDYSDAVKNASREKRFTVREFVFDPSKAGGVDGQIDQAKWEVQQTLTTIVRWCRAHFGEVFSGWMHLKVVKGFVESVLRYGLPVDFLSVFVEPNMKREKQQLQTLKTGIFKMRTELAANDWEADGDDNKDGNDESDSLPFVFHRFNATA 370
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: W4H5I3_9STRA (V-type proton ATPase subunit C n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5I3_9STRA) HSP 1 Score: 217 bits (553), Expect = 4.340e-60 Identity = 115/251 (45.82%), Postives = 162/251 (64.54%), Query Frame = 2
Query: 14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHV 763
+KKG NL L+++L+ + ++ V+TE L TL V + K+QE WL+ Y SIG +IA +FGP S RG VKGSPVVP S++K+LEEG+ LYTVT+L+GQYQ+G +D + F+ G DYV +FK +EKRF ARDF F+P N+ + +L+ EV +L++G++RWC+AHFGE F AWMHVK V+ +VESV+RYGLPV+F A + K G++ K++ AL Y H+
Sbjct: 153 KKKGGNLLVTNLADILTPDIVKTSDFVNTEYLQTLVVVVPKSQEAVWLQEYTSIGDDIA---------------------EFGPKHS-RGNVKGSPVVPHSSRKLLEEGDACLYTVTILKGQYQSGSYDQDGNFEPGTLLDYVEKFKLAAREKRFMARDFTFDPTSHATNETLVAELEVEVNRLYSGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAMLFKPKAGRDKKLRQALDKRYEHL 381
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: A0A6G0WZK4_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZK4_9STRA) HSP 1 Score: 217 bits (553), Expect = 4.340e-60 Identity = 118/286 (41.26%), Postives = 172/286 (60.14%), Query Frame = 2
Query: 14 RKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGE-QFQAGMSTDYVAEFKRKCKEKRFTARDFIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKDDEDTAYVSDKFSIVA 868
+KKG NL L+++L+ + ++ ++TE L TL V + K+QE+ W+ Y +IG +IA +FGP SR V+GSPVVP S++K+LEEG+ LYTVT+L+GQYQ+G +D + F+AG DYV +FK +EKRFTARDF F+P N+ M +L+ EV +L+ G++RWC+AHFGE F AWMHVK V+ +VESV+RYGLPV+F A + K G++ K++ L Y H+ + G E YVS+ F+ ++
Sbjct: 153 KKKGGNLLVTNLADILTPDIVKTSDFINTEYLQTLVVVVPKSQEEVWISSYSTIGEDIA---------------------EFGP-KQSRSSVRGSPVVPNSSRKLLEEGDACLYTVTILKGQYQSGTYDQDGNFEAGSLLDYVEKFKHAAREKRFTARDFTFDPTSHATNETMIAELEVEVNRLYTGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAVLYKPKAGKDKKLRQYLDKRYEHLQPAQFAAVEDAAGASSV----EYYPYVSNSFTPLS 412
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Match: K0TGY8_THAOC (V-type proton ATPase subunit C (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGY8_THAOC) HSP 1 Score: 220 bits (561), Expect = 3.330e-59 Identity = 121/276 (43.84%), Postives = 176/276 (63.77%), Query Frame = 2
Query: 2 QALKRKKGNNLATVELSEVLSSEQLRGVMMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWS-NPSVAYSLGTQDGQFGPGFSSRGVVKGSPVVPGSTQKVLEEGEQVLYTVTVLRGQYQAGFHDGEQFQAGMSTDYVAEFKRKCKEKRFTARD-FIFNPERTGENQRMEEQLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKDALSSLYSHVSQLSSGPITAGGGEDDADKD 823
Q KRK+G NL T +L++VL + +R V + DTE L TL VA+ + +++ ++GSE+ G PDWS NP+ LG+ + FG G G KGSPVVPGS +KV E+ E VL+ VTVL+G Y+AG+++G++F G TD V +F R +EKR++ R+ F+++P + G++ EQL+ EV + +G+ RWC+ H+GEAF AWMHVK+++ +VESV+RYGLPVDF+A + G+EAK+ AL + G EDDAD D
Sbjct: 359 QDAKRKRGGNLMTADLNDVLDEKVMRNVSVKDTEYLRTLFVAVPRAAVENFTADVYTLGSELVGYGGPDWSGNPA---GLGSAE-NFGQGVDRHGK-KGSPVVPGSLEKVTEDSESVLFAVTVLKGMYEAGYYEGDEFVPGTKTDLVGDFARILREKRYSVRESFVYDPSQQGKSALALEQLQVEVDNMRSGLTRWCKTHYGEAFVAWMHVKVIRVFVESVLRYGLPVDFTAVLYKVGSGKEAKLVGALDKAFGDDK----------GKEDDADDD 619 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1962.6323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1962.6323.1 >prot_Ecto-sp13_S_contig1962.6323.1 ID=prot_Ecto-sp13_S_contig1962.6323.1|Name=mRNA_Ecto-sp13_S_contig1962.6323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp MMVDTENLVTLAVAMGKTQEKDWLEGYESIGSEIASLGSPDWSNPSVAYSback to top mRNA from alignment at Ecto-sp13_S_contig1962:492..4353+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1962.6323.1 ID=mRNA_Ecto-sp13_S_contig1962.6323.1|Name=mRNA_Ecto-sp13_S_contig1962.6323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3862bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1962:492..4353+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1962:492..4353+ >mRNA_Ecto-sp13_S_contig1962.6323.1 ID=mRNA_Ecto-sp13_S_contig1962.6323.1|Name=mRNA_Ecto-sp13_S_contig1962.6323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1962:492..4353+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |