mRNA_Ecto-sp13_S_contig19595.6316.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI) HSP 1 Score: 234 bits (598), Expect = 1.400e-73 Identity = 120/134 (89.55%), Postives = 126/134 (94.03%), Query Frame = 1
Query: 1 MVLTASPHSSKPTVKVDDAMEEILLCPLLLEAFEEFCRKALCSESIMFLKAARAYNDSVYASTANEDTNFALFMDIFDEYIKDGSPFEINIESKTKSFIMRRTDKEAFKQLPLDDVARGLDAAAKEVGKMLKEN 402
MVL AS H SK TVK+DDAMEEIL CP+LLEAFEEFCRKALCSESI+FLKAA A+NDSVYASTANEDTNFALFMDIFD+YIKDGSPFEINIESKTKSFIM+RTDKEAFKQL LDD ARGLDAAAKEVGKMLKEN
Sbjct: 279 MVLAASTHCSKSTVKLDDAMEEILRCPVLLEAFEEFCRKALCSESILFLKAAWAFNDSVYASTANEDTNFALFMDIFDKYIKDGSPFEINIESKTKSFIMKRTDKEAFKQLRLDDAARGLDAAAKEVGKMLKEN 412
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: A0A6H5K976_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K976_9PHAE) HSP 1 Score: 148 bits (374), Expect = 6.520e-40 Identity = 80/129 (62.02%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 19 PHSSKPT-VKVDDAMEEILLCPLLLEAFEEFCRKALCSESIMFLKAARAYNDSVYASTANEDTNFALFMDIFDEYIKDGSPFEINIESKTKSFIMRRTDKEAFKQLPLDDVARGLDAAAKEVGKMLKEN 402
P SSK T VK+DD +EEIL P LLEAF EFCRKALCSES+MFL A + +++S+ AS A+ DT FA F +I D+YI+DGS FE+NIESKTK+ I+ RT +FK+LPLDD LD A KE+GKML+EN
Sbjct: 339 PSSSKFTSVKLDDKLEEILRFPPLLEAFGEFCRKALCSESLMFLTAGKDFHESLDASDADYDTIFARFNEIVDQYIRDGSSFEVNIESKTKAQILSRTSMSSFKELPLDDAVCILDLAVKEIGKMLQEN 467
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: A0A6H5K6R2_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R2_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.630e-31 Identity = 58/100 (58.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query: 37 TVKVDDAMEEILLCPLLLEAFEEFCRKALCSESIMFLKAARAYNDSVYASTANEDTNFALFMDIFDEYIKDGSPFEINIESKTKSFIMRRTDKEAFKQLP 336
+VK+DDA+E+IL LLEAFEEFC+KALC ES+MFLKA + SV+ASTA++D NF L DI +Y++ GSPFE+NI+SKTKS I+ + +E F +LP
Sbjct: 69 SVKLDDALEQILCFTPLLEAFEEFCQKALCIESLMFLKAVMGFRGSVHASTASDDGNFTLLTDIVQKYVQSGSPFEVNIDSKTKSNILVKITRETFMRLP 168
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: D7FN97_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN97_ECTSI) HSP 1 Score: 102 bits (254), Expect = 1.390e-24 Identity = 58/133 (43.61%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 58 MEEILLCPLLLEAFEEFCRKALCSESIMFLKAARAYNDSVYA----STANEDT--------------NFALFMDIFDEYIKDGSPFEINIESKTKSFIMRRTDKEAFKQLPLDDVARGLDAAAKEVGKMLKEN 402
++ I+ P L +AFEE+CR ALCSES+MFL A +N +++A STA +D NF F I D+YI++GSPFE+NIESK ++ I+R D+ +F++L LDD L+ A K+V ML+EN
Sbjct: 42 LDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFSTAGKDPESAAVAVNECEHNPNFEQFAAIVDKYIREGSPFEVNIESKIRNEILREVDRASFERLNLDDKEHLLEKATKQVSNMLREN 174
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: D7FYZ5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ5_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 9.420e-20 Identity = 47/115 (40.87%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 58 MEEILLCPLLLEAFEEFCRKALCSESIMFLKAARAYNDSVYASTANEDTNFALFMDIFDEYIKDGSPFEINIESKTKSFIMRRTDKEAFKQLPLDDVARGLDAAAKEVGKMLKEN 402
+E I+ P LLEAF+ FC+KALC ESI+ L+ A+ DS+YA A++D F F+ I +++IK GS +E+NI+ + ++ +MR D+ FK+L D A A + +ML +N
Sbjct: 388 LETIINTPPLLEAFDSFCQKALCGESILLLREVAAFRDSIYAVEADDDALFKEFVAIVNKFIKSGSSYEVNIDCRARTGVMRDVDEARFKELDTDGRADIFTLAETQTSQMLADN 502
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: A0A6H5JLE7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE7_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 3.470e-13 Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 1
Query: 130 ESIMFLKAARAYNDSVYAST------------------ANEDTNFALFMDIFDEYIKDGSPFEINIESKTKSFIMRRTDKEAFKQLPLDDVARGLDAAAKEVGKMLKEN 402
ES+MFL A +N S++A + E+ NF F I D+YI++GSPFE+NIESK + I+R D+ +F++L LD+ LD A K+V ML+EN
Sbjct: 163 ESLMFLVDADEFNCSLHAVSKFTSAGADPSPAAMGVVECEENLNFEQFAAIVDKYIREGSPFEVNIESKIRDEILREVDRASFRRLTLDEKVHLLDKATKQVSNMLREN 271
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 63.5 bits (153), Expect = 4.210e-9 Identity = 39/114 (34.21%), Postives = 60/114 (52.63%), Query Frame = 1
Query: 79 PLLLEAFEEFCRKALCSESIMFLKAARAYNDSVYASTANE----DTNFALFMDIFDEYIKDGSPFEINIESKTKSFIMRRTDK--EAFKQLPLDDVARGLDAAAKEVGKMLKEN 402
PLL AFE++ ++ALC ES++FL Y + YA+ N T F F I D +IK G+P E+NI K + I+ K E+F+++ ++ + EV ML+ N
Sbjct: 470 PLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEAN 583
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 9.320e-9 Identity = 43/122 (35.25%), Postives = 59/122 (48.36%), Query Frame = 1
Query: 61 EEILLCPLLLEAFEEFCRKALCSESIMFLKAARAYNDSVYASTANED------TNFALFMDIFDEYIKDGSPFEINIESKTKSFIMRRTDK--EAFKQLPLDDVARGLDAAAKEVGKMLKEN 402
E + PLL AFE++ ++ALC ES++FL Y YA++A T F F I D +IK GSP E+NI K I+ K E+F + +D A EV ML+ N
Sbjct: 123 ERLARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYATSARPSSESSCPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDVYHKGEESFGGVNEEDRRMIFSPAYLEVKSMLEAN 244
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: D7FTV9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI) HSP 1 Score: 54.7 bits (130), Expect = 8.160e-7 Identity = 30/77 (38.96%), Postives = 43/77 (55.84%), Query Frame = 1
Query: 61 EEILLCPLLLEAFEEFCRKALCSESIMFLKAARAYNDSVY------ASTANEDTNFALFMDIFDEYIKDGSPFEINI 273
E I PLL AFE++ ++ALC ES++FL Y ++ Y +S ++ F F I D +IK GSP E+NI
Sbjct: 7 ERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNI 83
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 55.8 bits (133), Expect = 2.010e-6 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 79 PLLLEAFEEFCRKALCSESIMFLKAARAYNDSVYASTANE-----DTNFALFMDIFDEYIKDGSPFEINI 273
PLL AFE++ ++ALC ES++FL Y + YA+ N T F F I D +IK G+P E+NI
Sbjct: 399 PLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI 468 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19595.6316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19595.6316.1 >prot_Ecto-sp13_S_contig19595.6316.1 ID=prot_Ecto-sp13_S_contig19595.6316.1|Name=mRNA_Ecto-sp13_S_contig19595.6316.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=134bp MVLTASPHSSKPTVKVDDAMEEILLCPLLLEAFEEFCRKALCSESIMFLKback to top mRNA from alignment at Ecto-sp13_S_contig19595:200..1359+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19595.6316.1 ID=mRNA_Ecto-sp13_S_contig19595.6316.1|Name=mRNA_Ecto-sp13_S_contig19595.6316.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1160bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19595:200..1359+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19595:200..1359+ >mRNA_Ecto-sp13_S_contig19595.6316.1 ID=mRNA_Ecto-sp13_S_contig19595.6316.1|Name=mRNA_Ecto-sp13_S_contig19595.6316.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=402bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19595:200..1359+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |