mRNA_Ecto-sp13_S_contig1954.6294.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: A0A835YZX1_9STRA (Flagellar C1a complex subunit C1a-32-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX1_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.480e-43 Identity = 68/135 (50.37%), Postives = 97/135 (71.85%), Query Frame = 2
Query: 404 KKERVMLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVFEQRHLHGVEEPPLAPPLGGAL 808
+K V++DFH YNYAFCKE+RFD + TST++SIM D+L +D+ +D S + SF+RF +LILRH V+RPPW+ G+ + +D+ IT+YV YYRH+ +YKH+FT ++ QR+LHG EEP + PPL A+
Sbjct: 15 EKTEVLVDFHLYNYAFCKEQRFDTQKTSTYMSIMTDVLKQDLSQDDPVSGQQASFDRFRDLILRHCVERPPWSVGIFTLEDVAGITEYVVN--SYYRHYRIYKHLFTARVETTLTQRNLHGTEEPRIPPPLCEAM 147
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: A0A6V1RZL7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZL7_HETAK) HSP 1 Score: 137 bits (346), Expect = 9.100e-36 Identity = 78/217 (35.94%), Postives = 118/217 (54.38%), Query Frame = 2
Query: 206 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCPEHDGTDGSWTNTDSASARTNSLTKKERVMLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVFEQRHLHGVEEPPLAPPLGGALMMINVPVVAGEQGDPD 856
M SV WKHF+ Q+ LEAA + +CK LL YL + E G D ++ ++LDFH+YNYAFCK+ F STFLSIMKD +D+D +D+ ++++ SF + ++ +L H ++RPPW+ G+ P+D+ ++D+V YYR F LYK++FT ++ V F Q + V + PL L + V GE D +
Sbjct: 1 MTDSVLWKHFTEAQLRELEAARDPVECKGLLKSYLKI------EDAGFD----------------RDRQDILLDFHFYNYAFCKKLGFGPTKISTFLSIMKDTIDKDFSQHDAVNTIKASFEQLKKTLLMHCIERPPWSVGIFQPEDLQLLSDFVLN--GYYRQFRLYKYLFTRRVQVEFTQTLSNDVGCARMPRPLAEGLPQV-VKTSVGEGEDDE 192
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: W2PIE1_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PIE1_PHYPN) HSP 1 Score: 119 bits (298), Expect = 1.270e-28 Identity = 69/212 (32.55%), Postives = 111/212 (52.36%), Query Frame = 2
Query: 206 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCPEHDGTDGSWTNTDSASARTNSLTKKERVMLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVFEQRHLHGVEEPPLAPPLGGALMMINVPVVAGE 841
M ++ WKH S +++ L + CK+ LA L D +D +K+R +LDFH +NY+FC++R F+ TS FL I + ++ D +DST+ L+ SF F+ ++L H+V+R P + G+ S +++ I DYVA YYRHF LYK I+T ++ F QR ++ V+ P PL ++ P+ + E
Sbjct: 1 MTEAIVWKHASERELAQLATRHSVDDCKSALAEIFEL--------DLSD-----------------EKQRFLLDFHLHNYSFCRQRHFELNQTSVFLGICQTLMKRDF-ASDSTTDLKSSFEFFQAMLLTHSVNRSPKSVGIFSREEVATIVDYVAN--SYYRHFQLYKCIYTPYYHLHFVQREINDVQTPKALRPLSQGFLLTAKPMPSDE 184
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: A0A7S2SS91_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS91_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.860e-25 Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 2
Query: 404 KKERVMLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVFEQRHLHGVEEP 778
+++ V+ +F++Y YAFCKE FDA TSTF+SI K +D ++ + +++SF RF+EL+L HAV+R PW V S D+ I Y+ Y+RHF +YK IFT K+ V +Q H VE P
Sbjct: 46 EQKEVVEEFYFYCYAFCKESGFDASKTSTFMSIAKATFHDDRSRDEFSCGMKQSFARFKELVLSHAVNRSPWAVRVFSEDDVARIISYMLN--SYFRHFKMYKLIFTRKLQVTLDQSEPHLVEPP 168
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: A0A329RNJ7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RNJ7_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.920e-23 Identity = 67/222 (30.18%), Postives = 106/222 (47.75%), Query Frame = 2
Query: 206 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCPEHDGTDGSWTNTDSASARTNSLTKKERVMLDFHYYNYAF----------CKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVFEQRHLHGVEEPPLAPPLGGALMMINVPVVAGE 841
M ++ WKH S +++ L + CK+ LA L A+ +K+ +LDFH +NY++ C +R F TS L I + ++ D DST++L+ SF+ F+ ++L H+V+R P + G+ S +++ AI DYV YYRHF LYK I+T +V F QR ++ V+ P PL + P+ GE
Sbjct: 1 MTEAIVWKHASERELAQLATRHSVDDCKSALAEIFELDLAD-------------------------EKQSFLLDFHLHNYSYPFFLHCAMDYCLQRHFQLNQTSVLLGICQTLMKRDF-ARDSTTNLKSSFDFFQAILLTHSVNRSPKSVGIFSREEVAAIVDYVTN--SYYRHFQLYKCIYTPYYHVHFVQREINDVQTPKTPRPLSQGFLHTVKPMPPGE 194
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: A0A6A3P3Y5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P3Y5_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.430e-21 Identity = 68/222 (30.63%), Postives = 108/222 (48.65%), Query Frame = 2
Query: 206 MATSVAWKHFSPEQISCLEAALEHEQCKTLLALYLGLGGANCPEHDGTDGSWTNTDSASARTNSLTKKERVMLDFHYYNYAFCKE----RRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVFEQRHLHGVEEPPLAPPLGGALMMINVPVVAGEQGD-PD 856
M ++ WKH + +++ L + CK+ LA L D +D +K+ +LDFH +NY++ R F TS FL I + ++ D +ST+ L+ SF+ F+E++L H+V+R P + GV S +++ AI DYV YYRHF LYK I+T +V QR ++ V+ P PL + P+ + E + PD
Sbjct: 1 MTEAIVWKHATENELAKLATRHSVDDCKSALAEIFDL--------DFSD-----------------EKQSFLLDFHLHNYSYPSPTIHGRHFQLNQTSVFLGICQTLMRRDF-ARESTTDLKSSFDYFQEILLTHSVNRSPKSVGVFSREEVTAIVDYVTN--SYYRHFQLYKCIYTPYYHVHLVQREINDVQTPKAPRPLSHGFLHSTRPLPSVESTETPD 194
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: A0A8J2SIJ6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIJ6_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 8.610e-18 Identity = 47/125 (37.60%), Postives = 72/125 (57.60%), Query Frame = 2
Query: 404 KKERVMLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVFEQRHLHGVEEP 778
++ ++ D++++ YAF K + FDA+ T LSI ++I D D TN + S+ KSF R E +LRHA RPP + D+ I +++ +Y+RH+ LYK IFT + + VF Q VE P
Sbjct: 73 QQREIVQDYYFHLYAFAKAKGFDAKKAGTLLSICREIFDADAATNAPSESMEKSFERLEAQLLRHAEFRPPKALDIFDEGDVQEIIEWML--HNYFRHYKLYKAIFTKRRSDVFSQAAPFAVEAP 195
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: K3XA92_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XA92_GLOUD) HSP 1 Score: 85.1 bits (209), Expect = 3.030e-16 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 2
Query: 455 KERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVFEQRHLHGVEEPPLAPPLGGALMMINVPVVA 835
++R F R TS L I + ++D D DS+S+L SF+ F+ L+L H+V R P + G+ S +++ AI D+V Y+RHF LYK I+T + Q+ ++GV+ P PL A++ + P VA
Sbjct: 29 RQRNFTHRQTSVLLGICQSLMDRDFCV-DSSSNLNSSFSHFQTLLLTHSVQRSPKSVGIFSVQEVAAIVDFVT--HTYFRHFHLYKGIYTPYYHTHIVQKAVNGVQVPQQPRPLADAILHLESPFVA 152
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: A0A7S1Q3Y6_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q3Y6_ALECA) HSP 1 Score: 88.2 bits (217), Expect = 3.080e-16 Identity = 40/111 (36.04%), Postives = 73/111 (65.77%), Query Frame = 2
Query: 407 KERVMLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINV 739
+ ++ D HY+NY+FC + F A TSTFLSIMK +L+E + + + ++ + F++ +L+H+V+RPPW+ GV + D+ A+ DYV ++RH+ LY +++ T+ ++
Sbjct: 96 RTEILADMHYHNYSFCTAQGFTAMKTSTFLSIMKLVLEEAISCRLTAA---EACDVFKDWLLKHSVERPPWSVGVFTYDDVKAVMDYV--HNTFFRHYRLYMYVYMTRCDL 201
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Match: A0A8C5E236_9TELE (Coiled-coil domain-containing protein 189-like n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5E236_9TELE) HSP 1 Score: 85.1 bits (209), Expect = 4.610e-16 Identity = 43/128 (33.59%), Postives = 73/128 (57.03%), Query Frame = 2
Query: 407 KERVMLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDSTSSLRKSFNRFEELILRHAVDRPPWTTGVLSPKDIGAITDYVATRQDYYRHFTLYKHIFTTKINVVFEQRHLHGVEEPPLAP 790
K V+L+ + + FC+E F TSTFLSI+K I D+ ++ + + +EL+L H+V RPP++ + P++I + +Y+ T Y++HF LYK++FT ++ + + VEE PL P
Sbjct: 40 KRGVLLELYVQSVLFCREHNFSREQTSTFLSIIKSI--HDLNVETPFDNIEQCVSYCKELLLCHSVRRPPFSINLFGPEEIKCVFEYIYT--SYFKHFKLYKYVFTPEVKLDLSLTYSETVEEEPLQP 163 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1954.6294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1954.6294.1 >prot_Ecto-sp13_S_contig1954.6294.1 ID=prot_Ecto-sp13_S_contig1954.6294.1|Name=mRNA_Ecto-sp13_S_contig1954.6294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=257bp MLLPWCCSHILQKQGGAHDAKEGPMATSVAWKHFSPEQISCLEAALEHEQback to top mRNA from alignment at Ecto-sp13_S_contig1954:2318..8082+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1954.6294.1 ID=mRNA_Ecto-sp13_S_contig1954.6294.1|Name=mRNA_Ecto-sp13_S_contig1954.6294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1954:2318..8082+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1954:2318..8082+ >mRNA_Ecto-sp13_S_contig1954.6294.1 ID=mRNA_Ecto-sp13_S_contig1954.6294.1|Name=mRNA_Ecto-sp13_S_contig1954.6294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=771bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1954:2318..8082+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |