prot_Ecto-sp13_S_contig19537.6292.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19537.6292.1
Unique Nameprot_Ecto-sp13_S_contig19537.6292.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A6H5KWT8_9PHAE (Ribosomal_S7 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWT8_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.870e-54
Identity = 94/101 (93.07%), Postives = 97/101 (96.04%), Query Frame = 0 
Query:    1 ILTRFSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            +LT  +  +VLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA
Sbjct:  131 LLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 231
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BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A812XN14_SYMMI (RPS5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XN14_SYMMI)

HSP 1 Score: 175 bits (443), Expect = 6.240e-54
Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 0 
Query:    1 ILTRFSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            ILT  +  +VLVDA+INSGPREDSTR+GSAGVVRRQAVD+SPFRRVNQA+YL+TTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA
Sbjct:   79 ILTDQNPVQVLVDAIINSGPREDSTRIGSAGVVRRQAVDVSPFRRVNQAIYLMTTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 179
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A1Q3D0W5_CEPFO (Ribosomal_S7 domain-containing protein (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3D0W5_CEPFO)

HSP 1 Score: 169 bits (429), Expect = 1.580e-52
Identity = 84/101 (83.17%), Postives = 96/101 (95.05%), Query Frame = 0 
Query:    1 ILTRFSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            +LT  +  +V+VDAV+NSGPRED+TR+GSAGVVRRQAVD+SP RRVNQALYL+TTGARES+FRNIKTIAECLADE+INAA+GSSNSYAIKKKDEIERVAKA
Sbjct:   26 LLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 126
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BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A2R6QRL5_ACTCC (40S ribosomal protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QRL5_ACTCC)

HSP 1 Score: 169 bits (428), Expect = 1.590e-52
Identity = 84/101 (83.17%), Postives = 96/101 (95.05%), Query Frame = 0 
Query:    1 ILTRFSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            +LT  +  +V+VDAVINSGPRED+TR+GSAGVVRRQAVD+SP RRVNQA+YL+TTGARES+FRNIKTIAECLADE+INAA+GSSNSYAIKKKDEIERVAKA
Sbjct:   15 LLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 115
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A7S0Q8A7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q8A7_9EUKA)

HSP 1 Score: 171 bits (433), Expect = 3.090e-52
Identity = 88/101 (87.13%), Postives = 95/101 (94.06%), Query Frame = 0 
Query:    1 ILTRFSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            ILT  +  +V +DA+INSGPREDSTRVGSAGVVRRQAVD+SPFRRVNQA+YL+ TGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA
Sbjct:   92 ILTDQNPVQVYIDAIINSGPREDSTRVGSAGVVRRQAVDVSPFRRVNQAIYLMATGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 192
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A835ZGP4_9STRA (Ribosomal protein S7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.250e-52
Identity = 88/101 (87.13%), Postives = 96/101 (95.05%), Query Frame = 0 
Query:    1 ILTRFSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            +LT  +  + LV+AVIN+GPREDSTRVGSAGVVRRQAVDLSPFRRVNQA+YL+TTGARESSFRNIKTIAECLADEIINA+RGSSNSYAIKKKDEIERVAKA
Sbjct:   91 LLTDENPLQTLVNAVINAGPREDSTRVGSAGVVRRQAVDLSPFRRVNQAIYLLTTGARESSFRNIKTIAECLADEIINASRGSSNSYAIKKKDEIERVAKA 191
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BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A7R9UBY1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBY1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 6.220e-52
Identity = 86/93 (92.47%), Postives = 92/93 (98.92%), Query Frame = 0 
Query:    9 KVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            +VLVDA+INSGPREDSTRVGSAGVVRRQAVD SPFRRVNQA+YL+TTGARE+SFRNIKTI+ECLADEIINAARGSSNSYAIKKKDEIERVAKA
Sbjct:  100 QVLVDAIINSGPREDSTRVGSAGVVRRQAVDCSPFRRVNQAIYLLTTGAREASFRNIKTISECLADEIINAARGSSNSYAIKKKDEIERVAKA 192
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A0K9P735_ZOSMR (Ribosomal protein 5B n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P735_ZOSMR)

HSP 1 Score: 170 bits (431), Expect = 6.610e-52
Identity = 86/101 (85.15%), Postives = 96/101 (95.05%), Query Frame = 0 
Query:    1 ILTRFSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            +LT  +  +V+VDAVINSGPRED+TR+GSAGVVRRQAVD+SP RRVNQALYLITTGARESSFRN+KTIAECLADE+INAA+GSSNSYAIKKKDEIERVAKA
Sbjct:   94 LLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLITTGARESSFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 194
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A2P5B7Z6_PARAD (Ribosomal protein n=4 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5B7Z6_PARAD)

HSP 1 Score: 169 bits (427), Expect = 1.030e-51
Identity = 83/101 (82.18%), Postives = 96/101 (95.05%), Query Frame = 0 
Query:    1 ILTRFSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            +LT  +  +V+VDAV+NSGPRED+TR+GSAGVVRRQAVD+SP RRVNQA+YL+TTGARES+FRNIKTIAECLADE+INAA+GSSNSYAIKKKDEIERVAKA
Sbjct:   63 LLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 163
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Match: A0A804UBJ8_MAIZE (Ribosomal_S7 domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804UBJ8_MAIZE)

HSP 1 Score: 167 bits (422), Expect = 1.300e-51
Identity = 82/97 (84.54%), Postives = 93/97 (95.88%), Query Frame = 0 
Query:    5 FSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKA 101
            F   +V+VDA+INSGPRED+TR+GSAGVVRRQAVD+SP RRVNQA+YL+TTGARES+FRNIKTIAECLADE+INAA+GSSNSYAIKKKDEIERVAKA
Sbjct:   19 FDDVQVVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 115
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19537.6292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWT8_9PHAE1.870e-5493.07Ribosomal_S7 domain-containing protein n=2 Tax=Ect... [more]
A0A812XN14_SYMMI6.240e-5489.11RPS5 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A1Q3D0W5_CEPFO1.580e-5283.17Ribosomal_S7 domain-containing protein (Fragment) ... [more]
A0A2R6QRL5_ACTCC1.590e-5283.1740S ribosomal protein n=1 Tax=Actinidia chinensis ... [more]
A0A7S0Q8A7_9EUKA3.090e-5287.13Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A835ZGP4_9STRA4.250e-5287.13Ribosomal protein S7 domain-containing protein n=1... [more]
A0A7R9UBY1_9STRA6.220e-5292.47Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A0K9P735_ZOSMR6.610e-5285.15Ribosomal protein 5B n=1 Tax=Zostera marina TaxID=... [more]
A0A2P5B7Z6_PARAD1.030e-5182.18Ribosomal protein n=4 Tax=Cannabaceae TaxID=3481 R... [more]
A0A804UBJ8_MAIZE1.300e-5184.54Ribosomal_S7 domain-containing protein n=1 Tax=Zea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10coord: 2..102
e-value: 1.4E-44
score: 153.9
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 8..101
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 2..103
e-value: 1.4E-19
score: 68.6
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 2..101
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 9..101
e-value: 3.5E-21
score: 75.4
NoneNo IPR availablePANTHERPTHR11205:SF36coord: 2..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19537contigEcto-sp13_S_contig19537:451..1387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19537.6292.1mRNA_Ecto-sp13_S_contig19537.6292.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19537 451..1949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19537.6292.1 ID=prot_Ecto-sp13_S_contig19537.6292.1|Name=mRNA_Ecto-sp13_S_contig19537.6292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
ILTRFSTSKVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQAL
YLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAK
AAFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036823Ribosomal_S7_dom_sf
IPR000235Ribosomal_S5/S7
IPR023798Ribosomal_S7_dom