prot_Ecto-sp13_S_contig1952.6282.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1952.6282.1
Unique Nameprot_Ecto-sp13_S_contig1952.6282.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length211
Homology
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: A0A6H5KJL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL2_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 4.820e-96
Identity = 165/219 (75.34%), Postives = 169/219 (77.17%), Query Frame = 0
Query:   23 VACCTGVTNTLKEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKLPCELHSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARN---------------------------------------LRLPEEQFPVAPHHDEKQ 202
            V C   +    +EDLR+KVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWV ESCREGRKLPCE HSLPPFEGLRITITGLSLDRKAELRAMIESGGG YMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARN                                       +RLPEEQFPVAPHHDEKQ
Sbjct:   13 VLCVNLLLGETQEDLREKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVTESCREGRKLPCERHSLPPFEGLRITITGLSLDRKAELRAMIESGGGEYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNQARSPAWKPAPIVDIHPAERSDRPFCIVFPPLLLALSLPVRLPEEQFPVAPHHDEKQ 231          
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: D7G795_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G795_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 9.130e-91
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 0
Query:   34 KEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKLPCELHSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARN 184
            +EDLR+KVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKLPCE HSLPPFEGLRITITGLS+DRKAELRAMIESGGG YMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARN
Sbjct:   21 QEDLREKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKLPCECHSLPPFEGLRITITGLSMDRKAELRAMIESGGGEYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARN 171          
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: K1PRR5_CRAGI (DNA topoisomerase 2-binding protein 1 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1PRR5_CRAGI)

HSP 1 Score: 109 bits (272), Expect = 5.840e-24
Identity = 63/180 (35.00%), Postives = 94/180 (52.22%), Query Frame = 0
Query:   22 VVACCTGVTNTLKEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCR-------EGRKLPCELHSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNLRLPEEQFPV 194
            VV CCT +   L+ +L +KV AMGG+   +LT S THL+A  + ++KY+VA    G  +  P WV +           G       +S P F+GL IT++GL  + + +++  +E  GG Y G M+    THL+  +  G KYE A   +W   I +V S WL  S  +   L E+QF +
Sbjct:  111 VVVCCTNLVKQLRNELHEKVEAMGGTVSRDLTSSVTHLIAGEVGSKKYQVAASA-GKQIYLPSWVNKVWEASQTKHIHGSSSQFLEYSCPIFKGLVITVSGLDSEERNQVKKAVEDEGGKYTGEMKVNECTHLIINKPKGAKYEFA--KKWR--INIVKSDWLYDSIEKGYCLEEKQFSL 285          
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: UPI00148AD0A1 (DNA topoisomerase 2-binding protein 1-A n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AD0A1)

HSP 1 Score: 109 bits (272), Expect = 6.050e-24
Identity = 63/180 (35.00%), Postives = 94/180 (52.22%), Query Frame = 0
Query:   22 VVACCTGVTNTLKEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCR-------EGRKLPCELHSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNLRLPEEQFPV 194
            VV CCT +   L+ +L +KV AMGG+   +LT S THL+A  + ++KY+VA    G  +  P WV +           G       +S P F+GL IT++GL  + + +++  +E  GG Y G M+    THL+  +  G KYE A   +W   I +V S WL  S  +   L E+QF +
Sbjct:  111 VVVCCTNLVKQLRNELHEKVEAMGGTVSRDLTSSVTHLIAGEVGSKKYQVAASA-GKQIYLPSWVNKVWEASQTKHIHGSSSQFLEYSCPIFKGLVITVSGLDSEERNQVKKAVEDEGGKYTGEMKVNECTHLIINKPKGAKYEFA--KKWR--INIVKSDWLYDSIEKGYCLEEKQFSL 285          
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: A0A087UFW7_STEMI (DNA topoisomerase 2-binding protein 1 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087UFW7_STEMI)

HSP 1 Score: 108 bits (269), Expect = 1.460e-23
Identity = 57/166 (34.34%), Postives = 91/166 (54.82%), Query Frame = 0
Query:   22 VVACCTGVTNTLKEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKL-------PCELHSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQS 180
            +   C+ +    +ED+  KV  MGG F  +LT S THL+   + ++KY+VA    G++++ PDWV      G+           + +  P F+GL IT++ LS + +A +++++E  GG YMGA++AR TTHLV  E +G KY  A     N  +  V+  W+  S
Sbjct:  112 ITVSCSNIDTKSREDINKKVELMGGFFSKDLTKSVTHLVVGEVGSKKYQVAASC-GLLIMVPDWVNAVWENGQHALLHATDSSFDKYKCPVFKGLIITVSQLSAEERAAIKSLVERNGGIYMGALKARETTHLVLSEPSGDKYRYAR----NWKVFCVNVSWIYDS 272          
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: UPI0015AF7E8E (DNA topoisomerase 2-binding protein 1-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AF7E8E)

HSP 1 Score: 105 bits (261), Expect = 1.760e-22
Identity = 55/166 (33.13%), Postives = 90/166 (54.22%), Query Frame = 0
Query:   22 VVACCTGVTNTLKEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKL-------PCELHSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQS 180
            +   C+ +    +ED+  KV  MGG F  +LT S THL+   + ++KY+VA    G++++ PDW+      G+           + +  P F+GL IT++ LS + +  +++++E  GG YMGA++AR TTHLV  E +G KY  A     N  +  V+  W+  S
Sbjct:  112 ITVSCSNIDTKSREDISKKVEFMGGFFSKDLTKSVTHLVVGEVGSKKYQVAASC-GLLIMVPDWINAIWESGQHSLLHATDSSFDKYKCPVFKGLVITVSQLSAEERTAIKSLVERNGGIYMGALKARETTHLVLSEPSGDKYRYAR----NWKVFCVNVSWIYDS 272          
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: A0A4Y2J2I5_ARAVE (DNA topoisomerase 2-binding protein 1-A n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2J2I5_ARAVE)

HSP 1 Score: 103 bits (257), Expect = 6.030e-22
Identity = 53/166 (31.93%), Postives = 91/166 (54.82%), Query Frame = 0
Query:   22 VVACCTGVTNTLKEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKL-------PCELHSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQS 180
            +   C+ ++N  +ED+R K+  MGG F  +LT S THL+   + ++KYRVA    G+ ++ P WV +    G+           + +  P F GL +T++ L+++ ++ +++++E  GG+Y+  ++A  TTHLV  E TG KY  A     N  I  V+  W+  S
Sbjct:  112 ITVSCSNISNEKREDMRYKIELMGGFFSKDLTKSVTHLVVGEVGSKKYRVAANF-GLSIMMPAWVEDVWETGQHQLIHALDKAYDKYKCPVFRGLVVTVSQLTVNERSSIQSLVEENGGSYLAPLKANQTTHLVLTEPTGDKYRYAK----NWKIFCVNVNWVYDS 272          
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: A0A8B8EDC5_CRAVI (DNA topoisomerase 2-binding protein 1-like isoform X1 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EDC5_CRAVI)

HSP 1 Score: 102 bits (255), Expect = 1.120e-21
Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 0
Query:   22 VVACCTGVTNTLKEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCR-------EGRKLPCELHSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNLRLPEEQFPVA 195
            VV CCT +    + +L +KV AMGG+   +LT + THL+A  + ++KY+VA    G  +  P WV +           G       ++ P F+GL IT++GL  + + +++  +E+ GG Y G M+    THL+  +  G KYE A   +W   I +V S WL  S  +   L E+QF ++
Sbjct:  111 VVLCCTNLVKQKRNELHEKVEAMGGTVSRDLTNNVTHLIAGEVGSKKYQVAAST-GKQIYLPCWVDKVWEASQTKHIHGSSSQFLEYACPIFKGLVITVSGLDSEERNQVKKAVEAEGGKYTGEMKVNECTHLIINKPKGPKYEFA--KKWK--IHIVKSDWLYDSIEKGYCLEEKQFALS 286          
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: A0A507CC56_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CC56_9FUNG)

HSP 1 Score: 102 bits (255), Expect = 1.130e-21
Identity = 60/185 (32.43%), Postives = 104/185 (56.22%), Query Frame = 0
Query:   19 LHGVVACCTGV-TNTLKEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKLPC-------ELHSLPPFEGLRITITGLS-LDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNLRLPEEQFPV 194
            L G++ C TG+  N L++D+ D++  MGG ++   T  T+HL+A S  + KY+ A  ++  VV +P+W+     + R  P        + + LPPF GL I +TG + + ++++++ +IE  GG +   +  +  THLVA   TG KY+ A+   W   + +V   WL++S  +  RL E ++PV
Sbjct:    8 LEGMLFCSTGLPANQLRDDMIDRIVKMGGQYNAAFTSDTSHLIALSTVSPKYKYAAKLEKPVV-KPEWIEVCWNQCRSSPSFDALSIMDEYRLPPFGGLVICVTGFTGVAQRSDIKKLIEDNGGVFSADL-LKTCTHLVASAPTGKKYDFAV--RWK--LMIVSLVWLEESVQKKARLEELEYPV 186          
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Match: L0PGQ1_PNEJ8 (Uncharacterized protein n=1 Tax=Pneumocystis jirovecii (strain SE8) TaxID=1209962 RepID=L0PGQ1_PNEJ8)

HSP 1 Score: 97.8 bits (242), Expect = 1.700e-21
Identity = 61/184 (33.15%), Postives = 94/184 (51.09%), Query Frame = 0
Query:   19 LHGVVACCTGVTNTLKEDLRDKVNAMGGSFDVNLTMSTTHLLAASLDTEKYR-VATGMKGVVVVRPDWVI---ESCREGRKLPC----ELHSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNLRLPEEQFPV 194
            L G+V CCT + + +K DL  K + +G  +  +LT   THL+A  L+T KY+ VA     + ++   W+    E    G  +      + H LPPF  L I +T +  ++++E+   I   GG Y   +  ++TTHL+A +A+G KYE  I  +W   IKV+   W  QS  R   L E  F +
Sbjct:   12 LCGIVVCCTSIPSEIKTDLALKASKLGAIYTQDLTSQVTHLIAGKLNTMKYKYVAMHRVDMKIMHVGWIFDIYEQWLNGDDIDFLEFEKKHILPPFYNLLICVTNIPAEQRSEIEEKITCFGGKYTPDLT-KDTTHLIATDASGRKYEFGI--KWG--IKVIRPEWFWQSIERGACLEEHFFSL 190          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1952.6282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJL2_9PHAE4.820e-9675.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G795_ECTSI9.130e-9196.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K1PRR5_CRAGI5.840e-2435.00DNA topoisomerase 2-binding protein 1 n=1 Tax=Cras... [more]
UPI00148AD0A16.050e-2435.00DNA topoisomerase 2-binding protein 1-A n=1 Tax=Cr... [more]
A0A087UFW7_STEMI1.460e-2334.34DNA topoisomerase 2-binding protein 1 (Fragment) n... [more]
UPI0015AF7E8E1.760e-2233.13DNA topoisomerase 2-binding protein 1-like n=1 Tax... [more]
A0A4Y2J2I5_ARAVE6.030e-2231.93DNA topoisomerase 2-binding protein 1-A n=1 Tax=Ar... [more]
A0A8B8EDC5_CRAVI1.120e-2133.15DNA topoisomerase 2-binding protein 1-like isoform... [more]
A0A507CC56_9FUNG1.130e-2132.43Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
L0PGQ1_PNEJ81.700e-2133.15Uncharacterized protein n=1 Tax=Pneumocystis jirov... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..211
NoneNo IPR availablePANTHERPTHR13561DNA REPLICATION REGULATOR DPB11-RELATEDcoord: 12..200
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..25
score: 7.0
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 16..93
e-value: 2.1E-10
score: 50.6
coord: 103..184
e-value: 2.3E-7
score: 40.5
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 22..85
e-value: 1.8E-13
score: 50.2
coord: 109..176
e-value: 1.9E-12
score: 46.9
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 101..194
score: 18.375
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 14..103
score: 15.454
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 16..103
e-value: 3.0E-19
score: 71.2
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 104..201
e-value: 5.2E-21
score: 76.9
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 17..103
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 103..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1952contigEcto-sp13_S_contig1952:677..4390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1952.6282.1mRNA_Ecto-sp13_S_contig1952.6282.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1952 677..4419 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1952.6282.1 ID=prot_Ecto-sp13_S_contig1952.6282.1|Name=mRNA_Ecto-sp13_S_contig1952.6282.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp
MKRSRSGARQARGKGGNLLHGVVACCTGVTNTLKEDLRDKVNAMGGSFDV
NLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKLPCEL
HSLPPFEGLRITITGLSLDRKAELRAMIESGGGTYMGAMEARNTTHLVAE
EATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNLRLPEEQFPVAPHHDE
KQKEEEEVEEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR036420BRCT_dom_sf