prot_Ecto-sp13_S_contig19470.6257.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19470.6257.1
Unique Nameprot_Ecto-sp13_S_contig19470.6257.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length593
Homology
BLAST of mRNA_Ecto-sp13_S_contig19470.6257.1 vs. uniprot
Match: D7FQS8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQS8_ECTSI)

HSP 1 Score: 891 bits (2302), Expect = 0.000e+0
Identity = 472/517 (91.30%), Postives = 487/517 (94.20%), Query Frame = 0
Query:   77 MDTRLRSLYECYEGARAGAVDFRDILCCTIVLRRFKDIRDNPLKLFRDLILLYSDDEGRVVQRQDALRVVRIGALHGGHILQTSNRLDKYLAEEAGPRGLKPTFRDLDITFLMQTIEANPSILVAFRTQLWQRIPEAWRLGVLQAVEAMGFEKASSGAMAMKERRAVRWYSKTLSRRIIVDWKIFRNRAKQIRAQRERIQNVRRRHTLRAWHASAAIHVLHRKRRGVADQYGRICTLQRYFYSIVKYVEVNKRLAAMAWKFSKQGKLVVAGVGLLRGVLRKRSMRLALQAWCETASLMNAWGFAVDLAGERLCRRVFAALRDTVRAAVAARRAEDEAEMRAAALAENIEEAERERVLLAELAEERKKRQKAXXXXXXXXXXXXXXXXXXXAARAGSVARDAEVLQRQREARKRRVYENRVKVKNEFDATWEVKLRETVEKEMELAKEWLESDPEAPFKVQKEMKILQRKFYAAPLPETAELERALRDPANYIFAHMANLLYKENKTLQMFFNQFDKE 593
            MDTRLRSLYECYEGARAGAVD+RDILCCTIVLRRFKDIRDNP KLFRDLILLYSDDEG VV+RQDALRV+RIGALHGGHILQTS RLDKYLAEEA PRGLKPTFRDLDITFLM TIEANPSILVAFRTQLWQRIPEAWRLGVLQAVEAMGFEKASSGAMAMKERRAVRWY+KTLSRRIIV WK+FRNRAKQIRAQRERIQNVRRR TLRAWHASAAIHVL RKRRGVADQYGRICTL+RYFYSIVKYVEVNKRLAA+AWKFSKQGKLV+AGVGLLRGVLRKRSMRLALQAWCETASLMNAWGFAVDLAGERLCRRVFAALRDTVRAAV ARRAEDEAEMRAAALAE+IEEAERERVLLAELAEERKKRQKA                   AARAGSVARDAEVLQRQREAR+RRVYENRVKVKN+FDA WEVKLRETVE+EMELAKEWL +DPEAPFKVQKEMKIL+RKFYAAPLPETAELERALRDPANYIFAHMANL+YKENKTLQMFFNQFDKE
Sbjct:    1 MDTRLRSLYECYEGARAGAVDYRDILCCTIVLRRFKDIRDNPRKLFRDLILLYSDDEGEVVRRQDALRVMRIGALHGGHILQTSTRLDKYLAEEARPRGLKPTFRDLDITFLMDTIEANPSILVAFRTQLWQRIPEAWRLGVLQAVEAMGFEKASSGAMAMKERRAVRWYTKTLSRRIIVGWKVFRNRAKQIRAQRERIQNVRRRQTLRAWHASAAIHVLRRKRRGVADQYGRICTLRRYFYSIVKYVEVNKRLAAVAWKFSKQGKLVMAGVGLLRGVLRKRSMRLALQAWCETASLMNAWGFAVDLAGERLCRRVFAALRDTVRAAVVARRAEDEAEMRAAALAESIEEAERERVLLAELAEERKKRQKAEEKAALMARRAAEHVEKIEAARAGSVARDAEVLQRQREARRRRVYENRVKVKNDFDAAWEVKLRETVEREMELAKEWLATDPEAPFKVQKEMKILKRKFYAAPLPETAELERALRDPANYIFAHMANLIYKENKTLQMFFNQFDKE 517          
BLAST of mRNA_Ecto-sp13_S_contig19470.6257.1 vs. uniprot
Match: A0A836CKE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE2_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.020e-55
Identity = 213/610 (34.92%), Postives = 293/610 (48.03%), Query Frame = 0
Query:   38 RYHSLACALEATPGQGCTVSKAAFVARMIAAYRFDRKLRMDTRLRSLYECYEGARAGAVDFRDILCCTIVLRRFKDIRDNPLKLFRDLILLYSDDEGRVVQRQDALRVVRIGALHGGHILQTSNRLDKYLAEEAGPRGLKPTFRDLDIT--------------FLMQTIEANPSILVAFRTQLWQRIPEAWRLGVLQAVEAMGFEKASSGAMAMKERRAVRWYSKTLSRRIIVDWKIFRNRAKQIRAQRERIQNVR------------------------------------RRHTLRAWHASAAIHVLHRKRRGVADQYGRICTLQRYFYSIVKYVEVNKRLAAMAWKFSKQGKLVVAGVGLLRGVLRKRSMRLALQAWCETASLMNAWGFAVDLAGERLCRRVFAALRDTVRAAVAARRAEDEAEMRAAALAENIEEAERERVL--LAELAEERKKRQKAXXXXXXXXXXXXXXXXXXXAARAGSVARDAEVLQRQREARKRRVYENRVKVKNEFDATWEVKLRETVEKEMELAKEWLESD--PEAPFKVQKEMKILQRKFYAAPLPETAELERALRDPANYIFAHMANLLYKENKTLQMFFNQFDKE 593
            R+ + A A  ATP    +++ A  V    A   F    R + RLR+LY  ++GA  GAVD R+I    ++LR+ + IR++P +L   L  L++ D G ++ R DAL+VV + A     +  T+ ++D++L E A    LKPTF+ L ++                +  ++ + ++L A  + +W R+P  WRL  LQ  E  G  + S+   A+K  RA     + L       W+ F  R +  R QRE +   R                                    R   LRA  A AA     R RRG       +   +R      +      R+    W  S  GK V+ GV   R V R+   R AL+ WCETASLM+AW FAV  +GER  RR F ALR  V  A++ RR E E                       LAE A+ER  R   XXXXXXXXXXXXXXXXXXX   AG VAR+  VLQ Q+ AR++RV +       +  A W V   E V        EWL       A ++V+K +  L+R+F AAP PETA+LERAL DPAN +FA +A+ L+  + TL+ FFN+FD E
Sbjct:  431 RHMAAAQAQAATPDFAASLAPAIHVDAS-ALRLFPGDARAEQRLRALYRAHDGAAQGAVDLREIAAGALLLRQHRLIRESPRQLLVALCELFTKDGGELLARSDALKVVSLAATTATDVYLTAGKMDRHLEEMAASYNLKPTFKMLPVSPAGRGARDAAVSLDLFLDVLDTHTALLSAIASTMWARVPAQWRLTCLQEAEDAGIGRLSAALSAIKAARAAAHRRRALVGAHWRAWRRFAERCRVERHQRETVLRCRCAXXXXXXXXXXXXXXXXXXXXNAAAAMGAGRILRLRLAQLRAATAEAA----QRLRRGALA----VSDTERCLRRCGRAASARHRVTRALWTSSAAGKRVLLGVARWRAVERRARQRSALRRWCETASLMSAWDFAVATSGERPRRRAFRALRAYVAHALSQRRLETEXXXXXXXXXXXXXXXXXXXXXXXLAEEAQERA-RXXXXXXXXXXXXXXXXXXXXXXXXXAG-VARERAVLQEQQAARRQRVRDQAAAALEQHKAYWAVHTEELVAAARRRRCEWLSGGGGDAARYEVEKGVAALRRRFLAAPSPETAQLERALADPANIVFAFVASRLWSRHVTLRDFFNEFDVE 1029          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19470.6257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQS8_ECTSI0.000e+091.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKE2_9STRA1.020e-5534.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 410..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19470contigEcto-sp13_S_contig19470:458..2715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19470.6257.1mRNA_Ecto-sp13_S_contig19470.6257.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19470 458..2715 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19470.6257.1 ID=prot_Ecto-sp13_S_contig19470.6257.1|Name=mRNA_Ecto-sp13_S_contig19470.6257.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=593bp
MLPDDLVGPDHGCTDRCRRQKWAGMRFLHNLVHQPPYRYHSLACALEATP
GQGCTVSKAAFVARMIAAYRFDRKLRMDTRLRSLYECYEGARAGAVDFRD
ILCCTIVLRRFKDIRDNPLKLFRDLILLYSDDEGRVVQRQDALRVVRIGA
LHGGHILQTSNRLDKYLAEEAGPRGLKPTFRDLDITFLMQTIEANPSILV
AFRTQLWQRIPEAWRLGVLQAVEAMGFEKASSGAMAMKERRAVRWYSKTL
SRRIIVDWKIFRNRAKQIRAQRERIQNVRRRHTLRAWHASAAIHVLHRKR
RGVADQYGRICTLQRYFYSIVKYVEVNKRLAAMAWKFSKQGKLVVAGVGL
LRGVLRKRSMRLALQAWCETASLMNAWGFAVDLAGERLCRRVFAALRDTV
RAAVAARRAEDEAEMRAAALAENIEEAERERVLLAELAEERKKRQKAEEK
AALMATRAAEHIEKIEAARAGSVARDAEVLQRQREARKRRVYENRVKVKN
EFDATWEVKLRETVEKEMELAKEWLESDPEAPFKVQKEMKILQRKFYAAP
LPETAELERALRDPANYIFAHMANLLYKENKTLQMFFNQFDKE
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