prot_Ecto-sp13_S_contig19466.6255.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19466.6255.1
Unique Nameprot_Ecto-sp13_S_contig19466.6255.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length430
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19466.6255.1 vs. uniprot
Match: D8LKN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN4_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 1.170e-77
Identity = 295/379 (77.84%), Postives = 299/379 (78.89%), Query Frame = 0 
Query:    1 ARAEVDELRAKVAAVEEMVASANRERDEAVLTNTDAAAAAAEVEA-----------GLKGELEASQAELEGEXXXVASLGQELDQAFKDKXXXXXRADAASQDLATSSAALRAERDALSARLATAEEEAAXXXXXXXXXXXXXXXXXXXXXX-VGDGERPXXXXXXXXXXXXGQQEEEIAALRARCEELEIGAAVASEKIAALEARVRDADAASPSSTAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-----ELLEKRLREAEEAAKEAAREMEGVVAGLREEQAALNSRVLELTAEVAAAREALSASQESLEREREDGLRQARVLTERAEAAEQAAATAXXXXAAAGQERXXD 362
            ARAEVDELRAKVAAV EMVASANRERDEAV                          GLKGELEAS+AELEGE   VA LGQEL QAFKDK     RADAASQDLATSSAALRAERDALSARLATAE    XXXXXXXXXXXXXXXXX      VGDGERP  XXXXXXXXXX      IAALRARCEELEIGAAVASEKIAALEARVRD DA S SSTA D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +     ELL+KRLRE +EAAKE ARE EGVVAGLREEQAALNSRVLELTAEVAAAREALSASQE LEREREDGLRQAR LTERAEAAEQAA  A    AAAGQER  D
Sbjct:  295 ARAEVDELRAKVAAVGEMVASANRERDEAVXXXXXXXXXXXXXXXXXXXXXXXXXXGLKGELEASRAELEGERERVACLGQELRQAFKDKEEAEARADAASQDLATSSAALRAERDALSARLATAEXXXXXXXXXXXXXXXXXXXXXETEAPSVGDGERPEEXXXXXXXXXXXXX---IAALRARCEELEIGAAVASEKIAALEARVRDVDAVS-SSTAGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESVAQLELLKKRLREVKEAAKEPAREKEGVVAGLREEQAALNSRVLELTAEVAAAREALSASQECLEREREDGLRQARQLTERAEAAEQAAEEA----AAAGQERERD 665
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BLAST of mRNA_Ecto-sp13_S_contig19466.6255.1 vs. uniprot
Match: A0A6H5KSR4_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR4_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 7.660e-56
Identity = 194/280 (69.29%), Postives = 200/280 (71.43%), Query Frame = 0 
Query:   86 ADAASQDLATSSAALRAERDALSARLATAEEEAAXXXXXXXXXXXXXXXXXXXXXX---VGDGERPXXXXXXXXXXXXGQQEEEIAALRARCEELEIGAAVASEKIAALEARVRDADAASPSSTAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQELLEKRLREAEEAAKEAAREMEGVVAGLREEQAALNSRVLELTAEVAAAREALSASQESLEREREDGLRQARVLTERAEAAEQAAATAXXXXAAAGQERXXD 362
            ADAASQDLATSSAALRAERDALSARLAT EEE  XXXXXXXXXXXXXXXX         VGDGE  XXXXXXXXXXX    EEE+AALR RC ELEIGAAVASEKIAALEARVRDADA SPSSTAED                                                  +ELLEKRLREAEEA+KEAARE EGVVAGLREEQAALNSRVLELTAEVA AREALS+SQ+SLEREREDGLR+ARVLTERAEAAEQAAAT XXXX    QER  D
Sbjct:  512 ADAASQDLATSSAALRAERDALSARLATVEEEXXXXXXXXXXXXXXXXXXQPPETEAPSVGDGEXXXXXXXXXXXXXA---EEELAALRTRCAELEIGAAVASEKIAALEARVRDADAVSPSSTAEDAAAAPEEASGGDRGQDEDGDAAATVVEATMPGVTSEAATDTREEESGAQ-RELLEKRLREAEEASKEAAREKEGVVAGLREEQAALNSRVLELTAEVATAREALSSSQKSLEREREDGLRKARVLTERAEAAEQAAATXXXXXXXXXQERERD 787
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19466.6255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKN4_ECTSI1.170e-7777.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSR4_9PHAE7.660e-5669.29GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableCOILSCoilCoilcoord: 44..131
NoneNo IPR availableCOILSCoilCoilcoord: 153..201
NoneNo IPR availableCOILSCoilCoilcoord: 253..326
NoneNo IPR availableCOILSCoilCoilcoord: 331..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19466contigEcto-sp13_S_contig19466:1..3233 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19466.6255.1mRNA_Ecto-sp13_S_contig19466.6255.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19466 1..3233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19466.6255.1 ID=prot_Ecto-sp13_S_contig19466.6255.1|Name=mRNA_Ecto-sp13_S_contig19466.6255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=430bp
ARAEVDELRAKVAAVEEMVASANRERDEAVLTNTDAAAAAAEVEAGLKGE
LEASQAELEGERERVASLGQELDQAFKDKEEAEARADAASQDLATSSAAL
RAERDALSARLATAEEEAAAAMARELEEEEEPQPPETEAPSVGDGERPEE
AAAAAAAADAGQQEEEIAALRARCEELEIGAAVASEKIAALEARVRDADA
ASPSSTAEDAAAAPEEEPSGGDGGQDEDGDAATTAVETTMAGVTSAAATD
SGEEESGAQQELLEKRLREAEEAAKEAAREMEGVVAGLREEQAALNSRVL
ELTAEVAAAREALSASQESLEREREDGLRQARVLTERAEAAEQAAATAAE
EAAAAGQERARDLEEQREKAAAAAAEAAAAAEAAGQERERGLLEQMEKAA
ASASASARAVAAAAAAAEAEEALGTLRQEK
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