mRNA_Ecto-sp13_S_contig10040.63.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10040.63.1
Unique NamemRNA_Ecto-sp13_S_contig10040.63.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: D7G5T9_ECTSI (ABC transporter ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T9_ECTSI)

HSP 1 Score: 536 bits (1382), Expect = 4.640e-186
Identity = 280/293 (95.56%), Postives = 280/293 (95.56%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAGGNEPKRPKFRPLPAV 879
            WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNF LPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTIN     RAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQ  N    LLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYE DLRRRAGGNEPKRPKFRPLPAV
Sbjct:  399 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFCLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINS----RAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQGGN----LLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYEQDLRRRAGGNEPKRPKFRPLPAV 683          
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: W7U335_9STRA (Abc transporter atp-binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U335_9STRA)

HSP 1 Score: 384 bits (987), Expect = 1.130e-126
Identity = 199/293 (67.92%), Postives = 231/293 (78.84%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAGGNEPKRPKFRPLPAV 879
            W+R +PKARQ K+KAR+  Y+ + QADE A   +R+   +I+IPPG PL   VVEAE+LGK  G RLL+D V+FSLPRGGVVG+IGANGVGKSTL  +IAGL+ PD G L +G+TV VMYVDQNRE + DP  +V+D V DGA++I LG R +N     RAYL WFNFKG DQQK V +LSGGERNRL LA+TLKQ  N    LLLLDEPTNDLDVDTLRALEDAI+AY GCAVI+SHDRYFLD+VATH LAFEDDG VVWFEG F+EY+ DL+ R GG EPKRPKFRPLP V
Sbjct:  380 WMRMSPKARQTKAKARITSYEQMVQADEEARENSRSGPTNIYIPPGPPLAAKVVEAENLGKWYGDRLLWDKVSFSLPRGGVVGVIGANGVGKSTLFKLIAGLEAPDQGALSLGDTVKVMYVDQNREAVADPTKTVYDTVADGAEQIELGKRVVNS----RAYLGWFNFKGADQQKPVGVLSGGERNRLCLAQTLKQGGN----LLLLDEPTNDLDVDTLRALEDAIEAYAGCAVIISHDRYFLDRVATHILAFEDDGNVVWFEGDFSEYQRDLQARNGGVEPKRPKFRPLPTV 664          
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: A0A835Z1K8_9STRA (ABC transporter ATP-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K8_9STRA)

HSP 1 Score: 360 bits (924), Expect = 5.990e-118
Identity = 195/297 (65.66%), Postives = 226/297 (76.09%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARAS--LESIFIPPGNPLGTIVVEAEDLGKAKGKRLL--YDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAGGNEPKRPKFRPLPAV 879
            WVR +P+ARQ+KSKAR+A Y++L  A EA  AA   S  +ESI+IPPG  LG  VV AE + K  G R+L   +G+ F LP+GG+VG+IG NGVGKSTLL MIAG   PD G L VGE+V  MYVDQNREGLDDP L+VF A+TDGADEI LG R +N     RAY  +FNFKG DQQK VNLLSGGERNRLNLARTLKQ  N    +L+LDEPTNDLD  TLRALEDAI  + GCA+IVSHDRYFLD+++TH LAFEDDG   WFEG+F EYE DL+RR GG EPKRPKFRP+P +
Sbjct:  317 WVRASPRARQSKSKARVAAYETL--AAEALQAATERSGPVESIYIPPGPKLGDTVVRAEKVAKYFGDRVLGGNEGLTFDLPKGGIVGVIGPNGVGKSTLLKMIAGQLQPDEGTLTVGESVQCMYVDQNREGLDDPNLTVFQAITDGADEIDLGTRKVNS----RAYCGFFNFKGIDQQKTVNLLSGGERNRLNLARTLKQGGN----VLMLDEPTNDLDHFTLRALEDAIQGFSGCAIIVSHDRYFLDRLSTHILAFEDDGTTTWFEGNFGEYEADLKRRNGGAEPKRPKFRPMPVL 603          
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: A0A7S2ZT64_9RHOD (Probable ATP-dependent transporter ycf16 n=8 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT64_9RHOD)

HSP 1 Score: 323 bits (828), Expect = 3.620e-103
Identity = 172/293 (58.70%), Postives = 214/293 (73.04%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAGGNEPKRPKFRPLPAV 879
            WV+ NPK +Q KSKAR+ R++ L   D  A    RA   +I+I PG  LG  VVEAE+L K  G R+L D ++FSLP+G +VGIIG NG GKSTL  M+  ++ PD G L +GE+V+ MYVDQ+REGLD  E +VF+ VT+  DEITLG RT+N     RAYL WFNFKG DQQKKV  LSGGERNR+NLA+ LKQ  N    +LLLDEPTNDLDVDTLRALE+A+  + GCA+++SHDR+FLD+VATH LAFE D  V WF+G+++EYE D  +R G  EP R KFRP+PA+
Sbjct:  351 WVQKNPKGQQVKSKARMERFNKLQSEDTRARDDMRAPPTNIYISPGPKLGDQVVEAENLRKVFGDRVLIDNLSFSLPKGAIVGIIGGNGAGKSTLFKMLMQMEEPDGGSLKIGESVNFMYVDQSREGLD-AEKTVFEEVTNNDDEITLGTRTVNS----RAYLGWFNFKGADQQKKVVNLSGGERNRINLAKVLKQGGN----VLLLDEPTNDLDVDTLRALEEAVLDFGGCAMVISHDRWFLDRVATHILAFEGDSEVRWFDGNYSEYEQDRVKRLGSVEPTRVKFRPIPAI 634          
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: A0A2K1L300_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L300_PHYPA)

HSP 1 Score: 320 bits (820), Expect = 1.100e-101
Identity = 171/290 (58.97%), Postives = 211/290 (72.76%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAGGNEPKRPKFRPL 870
            W+RTN K +Q K KAR   Y+ L Q  +A++      LES+F+PPG  LG +VVEA+ L K    RLL +G++FSLP GGVVG+IG NG GKSTL  MI G D+PD G+L VGETV  +Y+DQ+RE LD PE SVF+ +TDG +EI +G R +N    GRAY SWFNFK GDQQKKV +LSGGERNRL LA+ +K+  N    LLLLDEPTNDLDVDTLRALEDAI  + GCAV++SHDR+FLD++ATH LAFE D  V +++GS+ EYE D R+R G  EP R K+  L
Sbjct:  382 WIRTNAKGQQKKGKARERAYEELLQ--KASEYQKAEKLESMFMPPGPRLGNVVVEAQSLQKGFDGRLLINGLSFSLPPGGVVGVIGGNGAGKSTLFKMILGQDSPDGGELRVGETVAPLYIDQSRESLD-PEKSVFEEITDGQEEIFIGERKVN----GRAYCSWFNFKSGDQQKKVGMLSGGERNRLQLAKVMKKEGN----LLLLDEPTNDLDVDTLRALEDAIQDFAGCAVVISHDRWFLDRLATHILAFEGDSQVYYYQGSYTEYEADRRKRLGNKEPTRMKYATL 660          
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: A0A7S1EPY4_9RHOD (Probable ATP-dependent transporter ycf16 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPY4_9RHOD)

HSP 1 Score: 318 bits (815), Expect = 6.630e-101
Identity = 167/295 (56.61%), Postives = 215/295 (72.88%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAGGN--EPKRPKFRPLPAV 879
            WVR+NPK RQ K KAR+ RY  L +      +   ++++ I IP G  LG +V+EAE+LGK  G+R+L+D V+F LP+GG+VG+IGANG GK+TL  M+ GL++ D G L +GETV +MYVDQN + L+D E SVF  VTDG DEI LG  TIN     RAYLSWFNFKG DQQK+V  LSGGERNRL LA+ +++  N    LLLLDEPTN+LDVDTLR LE+AI  + GCAV++SHDR+FLD++ATH LAFE D  VVWFEG++ EYE + ++R G    +P R KFR +P++
Sbjct:  378 WVRSNPKGRQTKQKARMTRYSELLEEANKMRSRQISNMKQIMIPSGVRLGDLVIEAENLGKRYGERILFDNVSFDLPKGGIVGVIGANGSGKTTLFRMLTGLESADEGLLKMGETVQIMYVDQNLDTLEDMERSVFHEVTDGNDEIELGGSTINS----RAYLSWFNFKGQDQQKRVKDLSGGERNRLALAKVIRKQGN----LLLLDEPTNNLDVDTLRNLEEAILKFTGCAVVISHDRWFLDRIATHILAFEGDSNVVWFEGNYQEYEENRKKRLGTTSIDPSRVKFRSIPSL 664          
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: A0A5C2HGP7_9GAMM (Energy-dependent translational throttle protein EttA n=1 Tax=Ectothiorhodospiraceae bacterium BW-2 TaxID=947515 RepID=A0A5C2HGP7_9GAMM)

HSP 1 Score: 313 bits (803), Expect = 2.300e-100
Identity = 165/292 (56.51%), Postives = 217/292 (74.32%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAG--GNEPKRPKFRPL 870
            WVR+NPK R AKSKARLARY+ ++ +D       R     ++IPPG  LG +V+EA  + K+ G RLL D ++F+LPRGG+VG+IG NG GKSTL  M+AG++ PD G+L +GETV + YVDQ+R+ LD  + +V++ ++DG D +T+G  T+N     RAY+S FNFKG DQQK+V  LSGGERNRL+LA+ LKQ  N    LLLLDEPTNDLD++TLRALEDAI A+PGC V++SHDR+FLD++ATH LAFE D  VVWFEG++A+YE D +RR G   + P R K++PL
Sbjct:  275 WVRSNPKGRHAKSKARLARYEEIASSDYQK----RNETNELYIPPGERLGELVIEANAIRKSFGDRLLIDNLSFTLPRGGIVGVIGPNGAGKSTLFKMLAGVEQPDSGELRMGETVQLAYVDQSRDDLD-AKKTVWEELSDGLDLVTVGNYTLNS----RAYISRFNFKGNDQQKRVGDLSGGERNRLHLAKLLKQGGN----LLLLDEPTNDLDIETLRALEDAILAFPGCVVVISHDRWFLDRIATHILAFEGDSQVVWFEGNYADYEEDRKRRLGDAADTPHRIKYKPL 553          
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: A0A5J4Z0C3_PORPP (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0C3_PORPP)

HSP 1 Score: 313 bits (801), Expect = 6.030e-99
Identity = 167/293 (57.00%), Postives = 212/293 (72.35%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAGGN-----EPKRPKFR 864
            WVR++ K RQ K KAR+ RY+ L          A  ++  I IP G PLG +VVEAED+GK+ G +LL++ ++F+LPRGG+VG+IGANG GKSTL  MIAG D PD G L VG +V +MYVDQNR+ L D + +V++ +++G DE+  G RTI     GRAYLSWFNFKGGDQQKK+  LSGGERNR+NLA+ LKQ+ N    +LLLDEP+NDLD DTLR LEDAI  + GC V +SHDR+FLD++ATH LAFE D  V WFEG++AEYE +L++R G +     EP R KFR
Sbjct:  362 WVRSSAKGRQTKQKARMTRYEELVSESARDRDRALTAMNQIVIPAGPPLGELVVEAEDIGKSFGDKLLFENLSFNLPRGGIVGVIGANGSGKSTLFRMIAGQDVPDKGTLRVGPSVKLMYVDQNRDSLRD-DNTVYEEISEGNDEVDFGGRTIA----GRAYLSWFNFKGGDQQKKMRDLSGGERNRVNLAKVLKQSGN----VLLLDEPSNDLDTDTLRNLEDAILQFAGCVVCISHDRWFLDRIATHILAFEGDSKVEWFEGNYAEYEANLKKRLGLDASASLEPSRLKFR 645          
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: A0A3M0Z944_9GAMM (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0Z944_9GAMM)

HSP 1 Score: 301 bits (772), Expect = 9.520e-99
Identity = 165/294 (56.12%), Postives = 213/294 (72.45%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAGGNE--PKRPKFRPLPA 876
            WVR++PK R AKSKARLARY+ L+  +       R   + I IPPG  LG +VVEAE L KA G RLL+D ++FSLPRGG+VG+IG NG GK+TL  ++ G + PD G L +GETV + YVDQ R+ LD  + +V++ ++DG D IT+G   I      RAY+S FNFKG DQQK+V  LSGGERNR++LA+ L+   N    LLLLDEPTNDLDV+TLRALE+A+  +PGCA+++SHDR+FLD++ATH LAFE D  VVWFEG++A+YE D RRR G +E  P+R K+R L A
Sbjct:   41 WVRSSPKGRHAKSKARLARYEELASQEYQR----RNETKEIHIPPGPRLGELVVEAEGLRKAYGDRLLFDDLSFSLPRGGIVGVIGPNGAGKTTLFRILTGQERPDGGTLRIGETVQMAYVDQTRDALDG-DRTVWEEISDGQDLITVGGYQIQS----RAYVSRFNFKGPDQQKRVRELSGGERNRVHLAKLLRSGGN----LLLLDEPTNDLDVETLRALEEALLDFPGCAMVISHDRWFLDRIATHILAFEGDSRVVWFEGNYADYEADRRRRLGEDELQPRRIKYRRLEA 321          
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Match: A0A843SQG6_9BACT (Energy-dependent translational throttle protein EttA n=1 Tax=Luteitalea sp. TaxID=2004800 RepID=A0A843SQG6_9BACT)

HSP 1 Score: 302 bits (774), Expect = 1.470e-98
Identity = 164/292 (56.16%), Postives = 209/292 (71.58%), Query Frame = 1
Query:    1 WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLGTIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIAGLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGPRTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNNARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHTLAFEDDGGVVWFEGSFAEYELDLRRRAGG--NEPKRPKFRPL 870
            W+R +P+ARQAK KARL  Y+ L + D A     +     I+I PG  LG IVVEA +L K  G  LL DG+NF+LPRGG+VG+IG NG GK+TL  MI G +TPD G L VGETV + +VDQ+R+ L   + SV++ +T G DE+ LG RT+      RAY+SWFNFKG +QQ+KV  LSGGERNR++LA+ LK+ SN    LLLLDEPTNDLDVDTLRALE+A+  + GCAV++SHDR+FLD++ATH LAFE D  VVWFEG++ +YE D +RR G    +P R K+R L
Sbjct:   76 WIRMSPRARQAKGKARLNAYEDLLREDTAQ----KVETAEIYIAPGPRLGDIVVEARNLRKGYGDTLLIDGLNFTLPRGGIVGVIGPNGAGKTTLFRMITGQETPDGGTLRVGETVRIGHVDQSRDALG-ADNSVWEEITGGEDEVELGKRTVAS----RAYVSWFNFKGANQQRKVGSLSGGERNRVHLAKLLKKGSN----LLLLDEPTNDLDVDTLRALEEALLNFAGCAVVISHDRWFLDRIATHMLAFEGDSEVVWFEGNYQDYETDRKRRLGSAAEQPHRIKYRKL 354          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10040.63.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5T9_ECTSI4.640e-18695.56ABC transporter ATP-binding protein n=1 Tax=Ectoca... [more]
W7U335_9STRA1.130e-12667.92Abc transporter atp-binding protein n=2 Tax=Monodo... [more]
A0A835Z1K8_9STRA5.990e-11865.66ABC transporter ATP-binding protein n=1 Tax=Tribon... [more]
A0A7S2ZT64_9RHOD3.620e-10358.70Probable ATP-dependent transporter ycf16 n=8 Tax=R... [more]
A0A2K1L300_PHYPA1.100e-10158.97Uncharacterized protein n=1 Tax=Physcomitrium pate... [more]
A0A7S1EPY4_9RHOD6.630e-10156.61Probable ATP-dependent transporter ycf16 n=1 Tax=T... [more]
A0A5C2HGP7_9GAMM2.300e-10056.51Energy-dependent translational throttle protein Et... [more]
A0A5J4Z0C3_PORPP6.030e-9957.00Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A3M0Z944_9GAMM9.520e-9956.12ATP-binding cassette domain-containing protein (Fr... [more]
A0A843SQG6_9BACT1.470e-9856.16Energy-dependent translational throttle protein Et... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10040contigEcto-sp13_S_contig10040:359..4163 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score538.9
Seed ortholog evalue1.5e-150
Seed eggNOG ortholog2880.D7G5T9
Model size882
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.ATPase activity
EggNOG OGsCOG0488@1,KOG0927@2759
Cds size882
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10040.63.1prot_Ecto-sp13_S_contig10040.63.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10040 359..4163 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462502.7691135-CDS-Ecto-sp13_S_contig10040:358..5291681462502.7691135-CDS-Ecto-sp13_S_contig10040:358..529Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10040 359..529 +
1681462502.7804704-CDS-Ecto-sp13_S_contig10040:1118..12231681462502.7804704-CDS-Ecto-sp13_S_contig10040:1118..1223Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10040 1119..1223 +
1681462502.7942483-CDS-Ecto-sp13_S_contig10040:1737..19371681462502.7942483-CDS-Ecto-sp13_S_contig10040:1737..1937Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10040 1738..1937 +
1681462502.8096757-CDS-Ecto-sp13_S_contig10040:2082..22101681462502.8096757-CDS-Ecto-sp13_S_contig10040:2082..2210Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10040 2083..2210 +
1681462502.8199525-CDS-Ecto-sp13_S_contig10040:3070..32431681462502.8199525-CDS-Ecto-sp13_S_contig10040:3070..3243Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10040 3071..3243 +
1681462502.8294291-CDS-Ecto-sp13_S_contig10040:4058..41631681462502.8294291-CDS-Ecto-sp13_S_contig10040:4058..4163Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10040 4059..4163 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10040.63.1

>prot_Ecto-sp13_S_contig10040.63.1 ID=prot_Ecto-sp13_S_contig10040.63.1|Name=mRNA_Ecto-sp13_S_contig10040.63.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp
WVRTNPKARQAKSKARLARYDSLSQADEAADAAARASLESIFIPPGNPLG
TIVVEAEDLGKAKGKRLLYDGVNFSLPRGGVVGIIGANGVGKSTLLNMIA
GLDTPDMGKLVVGETVDVMYVDQNREGLDDPELSVFDAVTDGADEITLGP
RTINRQGDGRAYLSWFNFKGGDQQKKVNLLSGGERNRLNLARTLKQASNN
ARNLLLLDEPTNDLDVDTLRALEDAIDAYPGCAVIVSHDRYFLDKVATHT
LAFEDDGGVVWFEGSFAEYELDLRRRAGGNEPKRPKFRPLPAV*
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mRNA from alignment at Ecto-sp13_S_contig10040:359..4163+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10040.63.1 ID=mRNA_Ecto-sp13_S_contig10040.63.1|Name=mRNA_Ecto-sp13_S_contig10040.63.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3805bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10040:359..4163+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGGGTAAGAACGAACCCGAAGGCTCGACAGGCCAAGTCCAAGGCTCGTCT AGCACGCTACGACAGCCTCAGCCAGGCGGACGAGGCTGCTGACGCCGCTG CGAGGGCATCGTTAGAGAGCATCTTCATTCCCCCCGGCAACCCTCTAGGC ACCATCGTCGTCGAAGCGGAGGTATTTAGATGCAGTAGGTGATTTGCAGT ACCAATAATTTGTTGTCGCATAAAATATGCCATCGCCCCCTCCTGCACCG ATTTTCAAACCTGGACTATACTGGTTCCTCCACCACGAACAAAGACGAAA CCAAATGATGAGTGAGTTCTTCCGCACATCTTGTGGTTGATTGAATTTGT TCCTCCGGCATGATGAGCTTTTTTCTTGTAGAACCTCCGGTATTTGTGGA AGCGGAGTATCAGTAGCAAGTAGTACGGAGGCACGGGTTACTTCGGATTC GTGGTGTGTAAGTATTTTCTGCATGTCTCTCTTGAGAAGAACTGCTGCGT ACCTTGCCCACTCAAGCGAGTGGTGCGCTCGGTGCCGCCACAAATTACAT TCGTCGGGACCGGATAAATTATTTTATGTCATGTCTTTCCGCTCCTGCCG ATGTTGGTTTCATGTATGCATACTCTTTATCCACCTGTCGCTCTTTGTCT TTTCTCTGACTGTATGCCTTTATTTTTGTTTTTCTTTTAATTGTTTACTA TTTATTTTAGTGTTTGTTGTTCGCTTGCTTGCTCGCTTGCTTGTTTGTTT GTTTCGACAGGACCTCGGCAAGGCGAAGGGAAAACGCCTCCTCTACGACG GGGTTAACTTCAGCCTTCCCAGGGGGGGTGTCGTAGGGATCATCGGTGCC AACGGAGTCGGGAAGGTGACGCCACGCGTTTACAGTAACGTGAAATATTA CTGGTCCCTACCTTAGGCCGCATACATGCATTGTTCCAAGGGGGACAGTC TGAATAACCTGGCACCATTAAAAGATTTTGAGATGAGACTTATCCCGAAA ACCTGCCGCGTGTGTCACGGGATTATGTTATGTACCTTACCTGGCCACGC GGGTGTTTCTAGCACCCCCCGGTACTGTAATACTCTGCGGCGCCCCACCT CCTGACACCTGACACCCTCCACGATCTTCCTTCCGTCGCCATCCCTAACC CTAACACTAACATAAACACCACCACCGATGTGCGACAAGCCTCCCGCGCT GACGCCCAGCCTCGAGCGCGAAGATGAGTCCAGCCTCTTCCTCGGGGGCG TTGCATCCTCTTTGTCAAGAACAAGCAAACGCCTCCTTGCTTGTGCTCTT GTATATACACGTGTTTCGTGTAACGTCTTTTTCCTTCGTCGCGGGTTCTC GCACCCGCTCTGACAACAATAATGAACAGTCGACGCTGCTCAACATGATC GCCGGTCTGGACACCCCGGACATGGGAAAGCTGGTAGTGGGCGAGACCGT GGACGTGATGTACGTCGACCAAAACAGGGAGGGTCTGGATGACCCCGAAT TGTCGGTGTTCGACGCCGTGACGGACGGGGCTGATGAAATAACGCTGGGG CCCCGCACAATCAACAGGCAAGGCGATGGGTTTCAATCGTTAGTGTTGAG GTTGTTGATGTTGTTGTTGTTGTCAATTTTGTTGCTCTGCTGGGAGAAAC TATTTAACGCTCGTGTGCAATGATGTTCTGTCCGTGTCCATCCATTCGTT GCCTTGGGTCTGTTGCGTTCGCAGTCGCGCCTACCTGTCGTGGTTCAACT TCAAGGGAGGGGACCAGCAGAAGAAGGTTAACCTGTTGTCTGGGGGAGAG CGGAACCGCCTCAACCTGGCTAGGACGCTCAAGCAGGCGAGCAATAACGC TAGTACACCCCGGACACAGTGATGAAAGATGGTAGCGCATAGGCTTGAAC TGAACTACTGCGGGTCTCTTTGAAGGATGGTCGCCTATGGTAAAAAAACG AAGGGTTGTGTCCCTCTGTCCCACTCTTCAAGTTACGGTATTCCCACGGT ATTGACGAAGGAGTAGGTGTAGCTTGACTAGGTGTGGCTTGAAAGGTTAA GGTGAGGTCACATGCATGTCTTATCGATTGGTACAGGAAGTCGTGCCGTG GCTACAGCGAGGACGACGGCGTCGCTAACGCAACGATTCGAAGGAAGGAA GAAGGCACGTACCTTCACACATACTTGACTATTCCCAGTGCCAGGCTTTT CGTTGCCCTCCTCTCCTCTTTCTCCTGTCCCCGCTCTTGGTCTGTGTTCC ACGCCTGACCTGACCGCCTCAACACCTCTACCGCTGTTGTTGCACGTATG TGCATACAAAATATTCTCAAAAGAGTAGGCCAGCTTCCACTCCACTCTCC ACTCCTTCTTGCTTCATAGCTAAACAAAGACAATTACCCCCTCCCCGGAC TACAAAACAGTAGTGCTTCTTTGACCACAGGGATAAAGGCAACATTTTTT ATGAAGCGATATTTTTCAACTCGCGCTTAAACGCAGGAAAATGTTAGCGT TAGAATAGGCGAGCAGCTCCGCGATTCGCGGAATCCCATTGCTTGTGCCG TCTTGCCCTGTCCAACATTGCAACGTGTAAGCTAGGGCCCACGATGTCAA TGTCTGTTCGGCTTGTTCGCTCAGCGGAAACAACTCTCGATGGCAGCTAC AGCAGTCCTAGTTGAGACAACATTGCAGCTCTCATTTGTTTGTTTCTCGC CGGCGCAGGGAGGGAACCTGCTTTTGCTCGACGAGCCCACCAACGACTTG GACGTGGACACGCTAAGGGCGCTGGAAGACGCCATCGATGCCTACCCGGG GTGCGCGGTGATAGTGAGCCACGACAGGTACTTCCTAGACAAGGTCGCGA CGCACACGCTCGCCTTCGAGGACGACGGGGGCGTGGTGAGTCCTATTTGC GTTATTGATGATACCGGCATGGTGTCCACGATCTGCTGCTGCTGCTGCTG CTGCTGCTGTTGTTGTTGTTGTTGTTGTTGCGGTTGCCGGACGTGGTCGT GATGCCGCTGCCGCTGTATCGTGCTCCACGCTGTACGTAATTTCGCGGTA CGGAGCATGCCTGACCGTACCAACTCGTGATGTCATGGTGATGTCATCTG CGTTGTTGTTGACTTGCAAGCGTCTGGTGGGTGGAAAGCATGGGTATGTA TGTATGAAGATTGAACTTGCCAGTCGTCAAGTGTTAAGTATGTATGAAGA TTGAACTTGCCAGTCGTCAAGTGTTAAGTGATGCAGGTGTCGTCCGTCCT TGTCGTGATGGTGGTGTGAAAAATGGTATAATTCTGAGGACTACCTCCAC AGGATTTTAAGAGTATCTAGGAAAAGATTAGGGAGAGGGCACGCATACCC TATCACCAACCCTGACCCTCACCCCATGGCACGGATTGAATACTTTGTCC CACATGTTTGCTTAATCGTAGACTACTGAATTTTGACCAACATATACTTA TATGTACGGTGTTGCCTTGATACGGGGACTTGCTTCACTTGAGCTGAGCG CGTGTTGAATGTCACCCGAACACGAAGACTTCTGTTCGATGTAGGCCATT GTAGCTGACCATCAATGCCGTGTCGCTGACGCATGTATCACGTGCATCTC CGCTGCTCCTTCGATAGACCCCTAACGACAGTGAGTGCCTGGTTGTTGGT GCTATTCTAGACTTGGCTAGACTAACATCTGGCTGCTACCTCATTGTCAG GTGTGGTTCGAAGGCAGCTTCGCCGAGTATGAGCTGGACCTCCGGAGACG GGCAGGGGGCAACGAGCCCAAGAGACCCAAGTTCAGGCCGCTTCCGGCCG TCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10040:359..4163+

>mRNA_Ecto-sp13_S_contig10040.63.1 ID=mRNA_Ecto-sp13_S_contig10040.63.1|Name=mRNA_Ecto-sp13_S_contig10040.63.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=882bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10040:359..4163+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGGGTAAGAACGAACCCGAAGGCTCGACAGGCCAAGTCCAAGGCTCGTCT
AGCACGCTACGACAGCCTCAGCCAGGCGGACGAGGCTGCTGACGCCGCTG
CGAGGGCATCGTTAGAGAGCATCTTCATTCCCCCCGGCAACCCTCTAGGC
ACCATCGTCGTCGAAGCGGAGGACCTCGGCAAGGCGAAGGGAAAACGCCT
CCTCTACGACGGGGTTAACTTCAGCCTTCCCAGGGGGGGTGTCGTAGGGA
TCATCGGTGCCAACGGAGTCGGGAAGTCGACGCTGCTCAACATGATCGCC
GGTCTGGACACCCCGGACATGGGAAAGCTGGTAGTGGGCGAGACCGTGGA
CGTGATGTACGTCGACCAAAACAGGGAGGGTCTGGATGACCCCGAATTGT
CGGTGTTCGACGCCGTGACGGACGGGGCTGATGAAATAACGCTGGGGCCC
CGCACAATCAACAGGCAAGGCGATGGTCGCGCCTACCTGTCGTGGTTCAA
CTTCAAGGGAGGGGACCAGCAGAAGAAGGTTAACCTGTTGTCTGGGGGAG
AGCGGAACCGCCTCAACCTGGCTAGGACGCTCAAGCAGGCGAGCAATAAC
GCTAGGAACCTGCTTTTGCTCGACGAGCCCACCAACGACTTGGACGTGGA
CACGCTAAGGGCGCTGGAAGACGCCATCGATGCCTACCCGGGGTGCGCGG
TGATAGTGAGCCACGACAGGTACTTCCTAGACAAGGTCGCGACGCACACG
CTCGCCTTCGAGGACGACGGGGGCGTGGTGTGGTTCGAAGGCAGCTTCGC
CGAGTATGAGCTGGACCTCCGGAGACGGGCAGGGGGCAACGAGCCCAAGA
GACCCAAGTTCAGGCCGCTTCCGGCCGTCTGA
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