prot_Ecto-sp13_S_contig1943.6237.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1943.6237.1
Unique Nameprot_Ecto-sp13_S_contig1943.6237.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length275
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1943.6237.1 vs. uniprot
Match: D7G8J3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8J3_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 1.490e-178
Identity = 261/274 (95.26%), Postives = 265/274 (96.72%), Query Frame = 0 
Query:    1 MTDRKIFDLFYGARENDHDMCRRAYETGADINFAFDGRRATKGGAGRWYYGDLQWYAPDGVDGDKKDTLLIIAVKTNNAKLVQWMLTLDGLDTAKENGKGLNAMAVAKAIGRENLLLGMEACDDGLSGAVDMSEKSAANAADPNAPPLPPEKADADEAAMEVARLRTAMKMLKANNDEKEAKITKAQQDCQAYQQMLKEKDANIGELQKQVLEREKEVIVMLHKIGRLEEALREYTDFRQADAEQYTDWGRADQYDAESGGAGAAASAAPENGS 274
            MTDRKIFDLFYGARENDHDMCRRAYETGADINFAFDGRRATKGGAGRWYYGDLQWYAPDGVDGDKKDTLLIIAVKTNN KLV+WMLTLDGLDTAKENGKGLNAMAVAKAIGRENLLLGM ACDDGL G VD S KSAA+AADPNAPPLPP+KA ADEA MEVARLRTAMKMLKANNDEKEAKITKAQQDCQAYQQMLKEKDANIGELQKQVLEREKEVIVMLHKIGRLEEALREYTDFRQADAEQYTDWGRAD YDAE+GGAGAAASAAPENGS
Sbjct:    1 MTDRKIFDLFYGARENDHDMCRRAYETGADINFAFDGRRATKGGAGRWYYGDLQWYAPDGVDGDKKDTLLIIAVKTNNVKLVEWMLTLDGLDTAKENGKGLNAMAVAKAIGRENLLLGMAACDDGLPGGVDASAKSAASAADPNAPPLPPDKAAADEATMEVARLRTAMKMLKANNDEKEAKITKAQQDCQAYQQMLKEKDANIGELQKQVLEREKEVIVMLHKIGRLEEALREYTDFRQADAEQYTDWGRADHYDAENGGAGAAASAAPENGS 274
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1943.6237.1 vs. uniprot
Match: A0A836CH98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH98_9STRA)

HSP 1 Score: 202 bits (514), Expect = 7.320e-61
Identity = 119/260 (45.77%), Postives = 160/260 (61.54%), Query Frame = 0 
Query:    1 MTDRKIFDLFYGARENDHDMCRRAYETGADINFAFDGRRATKGGAGRWYYGDLQWYAPDGVDGDKKDTLLIIAVKTNNAKLVQWMLTLDGLDTAKENGKGLNAMAVAKAIGRENLLLGMEACDDGLSGAVDMSEKSAAN--------AADPNAPPLPPEKADADEAAMEVARLRTAMKMLKANNDEKEAKITKAQQDCQAYQQMLKEKDANIGELQKQVLEREKEVIVMLHKIGRLEEALREYTDFRQADAEQYTDWGRA 252
            MTDRK+FDLF+GARE D   C+ AYE GA++NF ++G++AT+G  GRWYYGDL W+APD VD +K +TLL+IA+K NN  LV W+LTLD LD    N KG +A  VA   GR ++L  M A       A                  AA  +APP     ADA+E    + R   A+K+L  +ND KE +    + + +  +Q++KEKDA IGELQ  V  +E+E+IVM+HK+ +L+  L EYTD RQ DA  +  WG+A
Sbjct:    1 MTDRKVFDLFFGAREGDLSACKAAYEAGANVNFQYEGKKATRGAGGRWYYGDLIWHAPDSVDANKNETLLMIAIKANNKPLVDWLLTLDRLDVTVRNIKGQDAFQVATEFGRSSMLT-MVATPPPAPAAXXXXXXXXXXXXXXXXXPAAVTSAPPSV--SADAEE----IKRQCNAIKLLTISNDTKEEENRALKAEVERCKQVIKEKDATIGELQNTVFSKEREMIVMMHKMEQLQATLAEYTDVRQGDAAVFEQWGQA 253
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1943.6237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8J3_ECTSI1.490e-17895.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CH98_9STRA7.320e-6145.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..217
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 9..124
e-value: 7.5E-6
score: 27.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 9..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1943contigEcto-sp13_S_contig1943:2137..4649 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1943.6237.1mRNA_Ecto-sp13_S_contig1943.6237.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1943 1349..5249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1943.6237.1 ID=prot_Ecto-sp13_S_contig1943.6237.1|Name=mRNA_Ecto-sp13_S_contig1943.6237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp
MTDRKIFDLFYGARENDHDMCRRAYETGADINFAFDGRRATKGGAGRWYY
GDLQWYAPDGVDGDKKDTLLIIAVKTNNAKLVQWMLTLDGLDTAKENGKG
LNAMAVAKAIGRENLLLGMEACDDGLSGAVDMSEKSAANAADPNAPPLPP
EKADADEAAMEVARLRTAMKMLKANNDEKEAKITKAQQDCQAYQQMLKEK
DANIGELQKQVLEREKEVIVMLHKIGRLEEALREYTDFRQADAEQYTDWG
RADQYDAESGGAGAAASAAPENGS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf