prot_Ecto-sp13_S_contig19356.6205.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19356.6205.1
Unique Nameprot_Ecto-sp13_S_contig19356.6205.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length413
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19356.6205.1 vs. uniprot
Match: A0A6H5KZY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY4_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 7.050e-55
Identity = 182/313 (58.15%), Postives = 194/313 (61.98%), Query Frame = 0 
Query:    1 QRESELNGVIARANAALEENNDRRKASAEDATTQKPLAAVADSERQLLSIIAQREAKAAYWEKASPRAENTSDRLSLLAHKERSGNEAAGTGTTATADAGGARAKGTQGAAAXAT-----GASESAGPQHQAARLSPSAQLSQAAQVATVSGLSWSIGAMQAARVVQARAXXXXXXXXXXXXXXXXXXXXXXTVAVQPTQQQTAPSAHQAESAEEAAPQSVGXXXXXXXXXXXXXXXXXXXXXXAEASPFAPHDSSDDAEVEQTNEEQQSEIKRRLVLVQAEISRLDKEEAESGRASTAAADGV-EHPPATLE 307
            +RESELNGVIA ANAALEENNDRRKA    +   +  +  +    +      +R+        A  RAENTSDRLSLLAHKE+SGNEAAGTG                    X       G SES GPQHQAARLSPSAQLS       VSG SWSIGA           XXXXXXXXXXXXXXXXX     TV +QP QQQ APSA Q  SAEEAAP +                        AEASPFAPHDSSD AE+EQTNEEQQSEIKRRLVLVQAEISRLDKEEAESGRAS AAADGV EHPPATLE
Sbjct:  518 ERESELNGVIASANAALEENNDRRKARRRRSPRVRSSSCRSSRSERPRRPTGKRQLA------AQARAENTSDRLSLLAHKEQSGNEAAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXIGDSESGGPQHQAARLSPSAQLSXXXXXXXVSGXSWSIGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGKATVVMQPAQQQPAPSAQQVASAEEAAPPT------------------------AEASPFAPHDSSDAAEMEQTNEEQQSEIKRRLVLVQAEISRLDKEEAESGRASPAAADGVVEHPPATLE 800
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BLAST of mRNA_Ecto-sp13_S_contig19356.6205.1 vs. uniprot
Match: D7FYI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI9_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.480e-13
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 0 
Query:    1 QRESELNGVIARANAALEENNDRRKASAEDATTQKPLAAVADSERQLLSIIAQREAKAAYWEKAS 65
            +RESELNGVIARANAALEEN+DRRKA            AVA+SERQLLSIIAQREAKAAYWEKAS
Sbjct:  353 ERESELNGVIARANAALEENDDRRKA------------AVAESERQLLSIIAQREAKAAYWEKAS 405
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19356.6205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZY4_9PHAE7.050e-5558.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYI9_ECTSI2.480e-1376.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19356contigEcto-sp13_S_contig19356:187..2865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19356.6205.1mRNA_Ecto-sp13_S_contig19356.6205.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19356 187..2865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19356.6205.1 ID=prot_Ecto-sp13_S_contig19356.6205.1|Name=mRNA_Ecto-sp13_S_contig19356.6205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=413bp
QRESELNGVIARANAALEENNDRRKASAEDATTQKPLAAVADSERQLLSI
IAQREAKAAYWEKASPRAENTSDRLSLLAHKERSGNEAAGTGTTATADAG
GARAKGTQGAAAAATGASESAGPQHQAARLSPSAQLSQAAQVATVSGLSW
SIGAMQAARVVQARAAGQAASEARAAAAGQASPGGKATVAVQPTQQQTAP
SAHQAESAEEAAPQSVGEAAPPSAGEPAPPSAGEPAPPSAEASPFAPHDS
SDDAEVEQTNEEQQSEIKRRLVLVQAEISRLDKEEAESGRASTAAADGVE
HPPATLESSSSSPAASAAATTTAAVTAPSWEPPLFPSSGNGVAGGVQQQQ
RQHGQQEERDEGQKEGLGEGAPAGRKGRRRARPRLAVAAAGARRVALCGE
LEALWTSHPPSE*
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