prot_Ecto-sp13_S_contig1928.6179.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1928.6179.1
Unique Nameprot_Ecto-sp13_S_contig1928.6179.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length225
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1928.6179.1 vs. uniprot
Match: A0A6H5L2B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B2_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 1.480e-111
Identity = 205/225 (91.11%), Postives = 206/225 (91.56%), Query Frame = 0 
Query:    1 MYTRKQRWRRTRTRKQAWGDLPPELLDAMLAAGGGGMPKSVSWDHSYAAGLKIRADRAAEVAHRAAAEDSKLRAAAXXXXXAAKGTGVEVSIPRSVSCSSLGPKRTLFARTSSSKGELGAAGXXXXXXXXXXXXXXXXXRMLPHRRGVSFNTQVKMVLIPKREEFSELERVKLWWGREDYSQFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEESTTGLDHS 225
            MYTRKQRWRRTRTRKQAWGDLPPELLDAMLAAGGG MPKSVSWDHSYAA LKIRADRAAEVAHRAAAEDSKLRAA XXXXX      VEVSIPRS SCSSLGPKRTLF RTSSSK ELGAA XXXXXXXXXXXXXX   RML HRRGVSFNTQVKMVLIPKREEFSELERVKLWWGREDY+QFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEES TG DHS
Sbjct:    1 MYTRKQRWRRTRTRKQAWGDLPPELLDAMLAAGGGRMPKSVSWDHSYAARLKIRADRAAEVAHRAAAEDSKLRAAXXXXXXXXXXXXVEVSIPRSASCSSLGPKRTLFPRTSSSKDELGAAXXXXXXXXXXXXXXXHKRRMLSHRRGVSFNTQVKMVLIPKREEFSELERVKLWWGREDYAQFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEESATGQDHS 225
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BLAST of mRNA_Ecto-sp13_S_contig1928.6179.1 vs. uniprot
Match: A0A835Z1A2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A2_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 5.860e-21
Identity = 44/75 (58.67%), Postives = 62/75 (82.67%), Query Frame = 0 
Query:  146 RGVSFNTQVKMVLIPKREEFSELERVKLWWGREDYSQFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEESTT 220
            R V+F+ +V++VLIPKR+E ++ +R +LWW R+DY++FRQVLIDWK  NA +IS +DNILSINLSD+D E++  T
Sbjct:  107 RAVAFDPRVQVVLIPKRDEINDFDRYRLWWSRDDYAKFRQVLIDWKTINADKISPTDNILSINLSDLDAEDDEPT 181
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1928.6179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2B2_9PHAE1.480e-11191.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1A2_9STRA5.860e-2158.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1928contigEcto-sp13_S_contig1928:4714..9322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1928.6179.1mRNA_Ecto-sp13_S_contig1928.6179.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1928 4714..9565 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1928.6179.1 ID=prot_Ecto-sp13_S_contig1928.6179.1|Name=mRNA_Ecto-sp13_S_contig1928.6179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
MYTRKQRWRRTRTRKQAWGDLPPELLDAMLAAGGGGMPKSVSWDHSYAAG
LKIRADRAAEVAHRAAAEDSKLRAAAAAAAVAAKGTGVEVSIPRSVSCSS
LGPKRTLFARTSSSKGELGAAGGGVRRGSSATTAAQHRRRMLPHRRGVSF
NTQVKMVLIPKREEFSELERVKLWWGREDYSQFRQVLIDWKRANAHRISH
SDNILSINLSDIDEEEESTTGLDHS
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