prot_Ecto-sp13_S_contig1928.6178.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1928.6178.1
Unique Name	prot_Ecto-sp13_S_contig1928.6178.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	475

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1928.6178.1 vs. uniprot
Match: D8LQA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA1_ECTSI)

HSP 1 Score: 550 bits (1417), Expect = 2.540e-191
Identity = 388/447 (86.80%), Postives = 392/447 (87.70%), Query Frame = 0

Query:   31 GQGNESGGADAWEVEVAVAKAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGD--GLGDVREGTDEGQKEEARIGEEVVGGGRGKKRRPCARASFSVGASGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHSPSSPADSGGGRLKEVPLSEAQAMAESLRAWRESFDVRNAFFGGESGDGDAEEDRGRAVSLQGQSRSFARRGRATALVTSRTKWTSDVVGGREGSSSVEAKGLCLEPGGRSGGEEGSGAMAXXXXXXXXXXXXXXG-CVDRGQRQDGVGEKTQRTLSDQEWSSSRRVVEMAASEAASLTNPVMAAFERERKEAAARQAEVEXXXXXXXXXXXXXXXXXXXXXNGEVVPXXXXXXXXXXXXAEDDGELHVGSVVRLGLNDAPGSAAAASAAGLRIAAEGISNLSLRSRDSVENLQEMGEQSWGPLPLSSSA 474
            GQGNESGGADAWEVEVAVA    XXXXXXXXXXX         XXXXXXXXX     GL DV EGTDEGQKEEARIG+EVVG G GKKRRPCARASFSVG SGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGH P SPADSGGGRL+EVPLSEAQAMAESLRAWR+SFDVRNAFFG ESGDGDAEEDRGRAVSLQ QSRSFARRGRATALVTSRTKWTSDVVGG EGSS VEAKGL LE GGRSGGEEGSGAMA XXXXXXXXXXXXX  CVDRGQRQDGVGEKT RTLSDQEWSSSRR+VEMAASEAASLTNPVMAAFERERKEAAARQAEVE   XXXXXXXXXXXXXXXXXX      XXXXXXXX    AEDDGELHVGSVVRLGLNDAPGS      AGLRIAAEGISNLSLRSRDSVENLQE GEQSWGPLPLSSSA
Sbjct:   34 GQGNESGGADAWEVEVAVAXXXXXXXXXXXXXXXGGAVPELSAXXXXXXXXXXXXXXGLEDVPEGTDEGQKEEARIGKEVVGSGGGKKRRPCARASFSVGGSGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHGPCSPADSGGGRLREVPLSEAQAMAESLRAWRQSFDVRNAFFG-ESGDGDAEEDRGRAVSLQVQSRSFARRGRATALVTSRTKWTSDVVGGGEGSSGVEAKGLGLELGGRSGGEEGSGAMAGXXXXXXXXXXXXXXXCVDRGQRQDGVGEKTHRTLSDQEWSSSRRIVEMAASEAASLTNPVMAAFERERKEAAARQAEVEDAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGT-AEDDGELHVGSVVRLGLNDAPGSXXXXXXAGLRIAAEGISNLSLRSRDSVENLQERGEQSWGPLPLSSSA 478

[Close]

BLAST of mRNA_Ecto-sp13_S_contig1928.6178.1 vs. uniprot
Match: A0A6H5L2B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B2_9PHAE)

HSP 1 Score: 525 bits (1353), Expect = 2.570e-177
Identity = 359/456 (78.73%), Postives = 368/456 (80.70%), Query Frame = 0

Query:   21 LEDVVQPAVVGQGNESGGADAWEVEVAVAKAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDGLGDVREGTDEGQKEEARIGEEVVGGGRGKKRRP-CARASFSVGASGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHSPSSPADSGGGRLKEVPLSEAQAMAESLRAWRESFDVRNAFFGGESGDGDAEEDRGRAVSLQGQSRSFARRGRATALVTSRTKWTSDVVGGREGSSSVEAKGLCLEPGGRSGGEEGSGAMAXXXXXXXXXXXXXXGCVDRGQRQDGVGEKTQRTLSDQEWSSS-RRVVEMAASEAASLTNPVMAAFERERKEAAARQAEVEXXXXXXXXXXXXXXXXXXXXXNGEVVPXXXXXXXXXXXXAEDDGELHVGSVVRLGLNDAPGSAAAASAAGLRIAAEGISNLSLRSRDSVENLQEMGEQSWGPLPLSSSA 474
            LEDV Q    GQ NESGGADA E+EVAVAKA A                    XXXXXXX   GDGLGDV +GTDE QK                     CARASFSVG SGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHSPSSPADSGG RLKEVPLSEAQAMAESLRAWR+SFDVRNA FGGESGDGDAEEDR RAVSLQ QSRSFAR GRATAL TS+TKWT+DVVGG EGSSSVEA GL L+PGGRSGGEEGSGAM XXXXXXXXXXXXX   VDRGQRQDGVGEKT RTLSDQEWSSS RR VEMAASEAASLTNPVMAAFER+RKEAAARQAEV XXXXXXXXXXXXXXXXXX   NGEV P            AEDDGELH+GSVVRLGLNDAPGSA+AASAAGLRIAAEGISNLSLRSRDSVENLQEMGEQSWGPLPLSSSA
Sbjct:  330 LEDVCQQVAAGQRNESGGADALEMEVAVAKAKAAAVGAAGGGIAGGAVPELSAXXXXXXXN--GDGLGDVPQGTDEEQKXXXXXXXXXXXXXXXXXXXXHCARASFSVGESGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHSPSSPADSGGARLKEVPLSEAQAMAESLRAWRQSFDVRNASFGGESGDGDAEEDRDRAVSLQEQSRSFARIGRATALFTSQTKWTTDVVGGGEGSSSVEATGLGLDPGGRSGGEEGSGAMXXXXXXXXXXXXXXGSRVDRGQRQDGVGEKTHRTLSDQEWSSSSRRTVEMAASEAASLTNPVMAAFERKRKEAAARQAEVXXXXXXXXXXXXXXXXXXXKAGNGEVAPAAGAEGAPAA--AEDDGELHMGSVVRLGLNDAPGSASAASAAGLRIAAEGISNLSLRSRDSVENLQEMGEQSWGPLPLSSSA 781

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1928.6178.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1928.6178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQA1_ECTSI	2.540e-191	86.80	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L2B2_9PHAE	2.570e-177	78.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 347..370

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1928	contig	Ecto-sp13_S_contig1928:3067..4491 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1928.6178.1	mRNA_Ecto-sp13_S_contig1928.6178.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1928 3067..4491 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1928.6178.1 ID=prot_Ecto-sp13_S_contig1928.6178.1|Name=mRNA_Ecto-sp13_S_contig1928.6178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=475bp
MERERCRQALPTPPPLQQQPLEDVVQPAVVGQGNESGGADAWEVEVAVAK
AMAAAVAAAGGGIAGGVVPELSAAAAAAAAVAGGDGLGDVREGTDEGQKE
EARIGEEVVGGGRGKKRRPCARASFSVGASGLAGGGGPDWSPNGGANGTF
PLRRALTFGEVGGGHSPSSPADSGGGRLKEVPLSEAQAMAESLRAWRESF
DVRNAFFGGESGDGDAEEDRGRAVSLQGQSRSFARRGRATALVTSRTKWT
SDVVGGREGSSSVEAKGLCLEPGGRSGGEEGSGAMAGGGGAASDGSSSGG
GCVDRGQRQDGVGEKTQRTLSDQEWSSSRRVVEMAASEAASLTNPVMAAF
ERERKEAAARQAEVEEAQAARAAAMVKQAAAAAKAGNGEVVPAAAAGAAG
AAGAAEDDGELHVGSVVRLGLNDAPGSAAAASAAGLRIAAEGISNLSLRS
RDSVENLQEMGEQSWGPLPLSSSA*