mRNA_Ecto-sp13_S_contig1927.6174.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1927.6174.1
Unique NamemRNA_Ecto-sp13_S_contig1927.6174.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: D8LB55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB55_ECTSI)

HSP 1 Score: 649 bits (1673), Expect = 1.970e-231
Identity = 325/330 (98.48%), Postives = 327/330 (99.09%), Query Frame = 1
Query:    1 MPPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAA 990
            MPPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTG ALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLL LAE+SCGTMIFPLK GKPQASLSSR+ELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAA
Sbjct:    1 MPPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAA 330          
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: A0A835Z6A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A9_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 1.240e-131
Identity = 198/328 (60.37%), Postives = 248/328 (75.61%), Query Frame = 1
Query:    4 PPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKP-TETVLQVPYKDEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRD---VMPAYLCTPTDVHV 975
            PP  RP  G+ WPLVPNSKK GDRSTT+ANK AL AA GA+ P  A  +  ERNWR+ Y KY+ +HV ACL+ K+ AV +++AGL+WVH+NFEF+++GK+M L+ AM++I  +F+TA + G+ P+P T   L++PYK ++L G  LE QV +WV YGTIEPSAG AI  V +  EWRDLSD+YFVLLGA SAMGPL+LLLELGAN++A+DLDRP IW  LLALA +S GTM FP K     A L+  +++   AG NLL  TPEIL+WL++    KPLVVG+YAYLDGELHVR+SLAMDAI+KGLTE +     V PAYLCTPTD+HV
Sbjct:    3 PPPRRPPAGIQWPLVPNSKKEGDRSTTYANKAALKAASGAIRPEEAAAIDAERNWRKNYGKYLLRHVSACLEVKDGAVTAAEAGLQWVHDNFEFIKDGKTMPLSTAMATIKSTFKTATVTGSVPRPETPPPLRIPYKGKVLEGGELERQVVRWVEYGTIEPSAGDAILTVMRTDEWRDLSDKYFVLLGASSAMGPLRLLLELGANVIAVDLDRPHIWTSLLALARASSGTMTFPTKGDT--AGLTD-EQIAGVAGCNLLTETPEILDWLRSTHAGKPLVVGAYAYLDGELHVRVSLAMDAIIKGLTEDKAAHPAVTPAYLCTPTDIHV 327          
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: A0A139AEM4_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AEM4_GONPJ)

HSP 1 Score: 317 bits (812), Expect = 1.900e-101
Identity = 171/326 (52.45%), Postives = 228/326 (69.94%), Query Frame = 1
Query:   19 PLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGS-FETAVIKGTKPKPTET-VLQVPYKDEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAA 990
            P DGLV+P  P+ K+ G+R +T+ NK A AAAIGA+ PA A+++  E++WR  YTKY+ K VE   +S + A+A +K GL++ +NNFEFVREGK   L  A+ + T   F+T  IKGT  KP    VL+VPYK + L+G AL  Q+D+W SYGTIE +A   I +V +  +W DLSD+YF LLGAGSAMGP   L+ LGANI+AIDL+R  IW+RL+++A +S GT+ FPL   + +    S +EL   AG NL   TPEI  W+ +V P+K + VG+YAYLDGELHV++SLAMDAI++ +T ++R    AYLCTPTDVHVI S A
Sbjct:    9 PEDGLVFP--PDPKRPGERGSTFGNKGAWAAAIGAISPADAEKIQKEKDWRNNYTKYIIKQVEESARSPQKAIAVAKGGLDYCYNNFEFVREGKVSTLQQALDTYTTPIFKTGFIKGTGEKPKGGYVLKVPYKGKELSGDALLAQLDRWYSYGTIEKTARDYIAEVVKNQQWLDLSDKYFCLLGAGSAMGPFLTLMALGANIIAIDLNRAPIWKRLISVARNSPGTITFPLLGDQDK---MSDEELFEKAGCNLFTQTPEIRTWVLSVYPDKHITVGAYAYLDGELHVKVSLAMDAIIRDMT-TKRKAGAAYLCTPTDVHVITSDA 328          
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: A0A7S3V160_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V160_9STRA)

HSP 1 Score: 317 bits (812), Expect = 4.780e-99
Identity = 168/333 (50.45%), Postives = 217/333 (65.17%), Query Frame = 1
Query:   13 SRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYK-------DEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAA 990
            +RP DGLVWP+   ++  G+RST+  NK    A++  VD +LA  +   R+WR  Y KYV K++  CL+S+  A+A +K GL      F FVR+GK+  L  AM+SITG+F T  +KGT  KP    L +PY        ++ L G     Q+D WV  GTIEPSAG  IK   Q   W DLSDRYFVLLGA SAMGPL  LL LGANI+AID+DR G+W+ L+  A +SCGT+ FPL   KPQ+ +SS +EL   AG+NLLA TPEI NW+ +V  ++PL +G+Y YLDG LHV+LSLA D+I++ L   R+D   A+LCTPTD H IP  A
Sbjct:  209 ARPADGLVWPVT--NEATGERSTSVTNKAIWEASVRGVDNSLADSIKKTRSWRFGYVKYVEKNLRCCLKSEANALAVAKQGLSAAKEKFLFVRDGKTQSLKDAMNSITGTFHTGFVKGTGSKPNFK-LTIPYTKFGSNNPEKQLEGVEAMKQIDAWVEAGTIEPSAGDGIKMCIQNPAWMDLSDRYFVLLGATSAMGPLNALLALGANIIAIDIDREGVWKTLIEKARASCGTLTFPLS--KPQSEISSDEELFKCAGSNLLAKTPEIANWICSVHTDRPLTIGNYTYLDGALHVQLSLACDSIMERLCSERKDTSIAFLCTPTDCHAIPKEA 536          
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: A0A7S3W6Z5_9SPIT (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3W6Z5_9SPIT)

HSP 1 Score: 312 bits (800), Expect = 1.900e-97
Identity = 159/325 (48.92%), Postives = 213/325 (65.54%), Query Frame = 1
Query:   19 PLDGLVWPLVPNSKKAGD-RSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAA 990
            P+DGL WP+    ++    RST    K+ LA A+ AVD + A  V  E+ WR KY ++  K VE    S EAA+  + AGL+++++ FEF+R+GK+  L  A++   GSF T  IKG KPKP +  L+VPY  +IL G +L+ Q+DKWV  G  E S G+AI  V+    W DLSDRYFVLLGAG+AMGP ++LL LGANI+A+D+ RP IW+RL++  + SCGT+ FP+K G  Q S    D L  AAG NL   TPEI NWL+ V+P +   VG YAY+ G+L  R++LAMD I+K L E+R     A+LCTPTD H++P AA
Sbjct:   10 PIDGLSWPVTGVDEEGKQARSTQTTGKEILAVALEAVDASAAAAVRSEKGWRFKYRRHFVKSVEVSASSPEAALKVAAAGLDYMYDKFEFIRDGKTYVLRDALAQFKGSFATGFIKGNKPKPNKFELEVPYNGQILKGDSLQRQIDKWVRQGVCELSCGSAISQVANAEPWLDLSDRYFVLLGAGAAMGPFQVLLALGANIIAVDIGRPDIWKRLISQTKDSCGTLTFPMKPGFKQPSTPD-DSLYEAAGCNLFTQTPEIKNWLREVTPSEKACVGGYAYIPGDLFPRVALAMDVIIKELVETR-GASVAFLCTPTDAHLVPPAA 332          
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: A0A7S4BKX7_CHRCT (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BKX7_CHRCT)

HSP 1 Score: 312 bits (799), Expect = 2.030e-97
Identity = 167/322 (51.86%), Postives = 210/322 (65.22%), Query Frame = 1
Query:   25 DGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAA 990
            +GL WP+     K   RST    K+ L AA+ AVD   A  V  ER WR KY K+  K VE   +S E A+  + AGL++++++FEF+R+G+   L  A+    G F T V+ G KPKP    L VPY    LTG AL+ Q+DKWV  G  E S GAAI  V+Q   W DLSDRYFVLLGAG+AMGPL++LL  GAN++A+DL+   IW+RL+ LA+ SCGT+ FPLKEG  Q+ LS  DEL  AAG NL   TPEI NWL TV P K L VG YAYL G+L  R++LAMD I+K LTE R+  + A+LCTPTD H++P  A
Sbjct:    7 EGLCWPVTSTDDKGEVRSTQDTGKRILEAALRAVDDEAADAVHRERGWRFKYKKHFVKSVEISAKSPENALKVAGAGLDYMYDHFEFIRDGQRHVLREALRIYKGGFGTGVVAGQKPKPDSFELGVPYNGTTLTGDALQAQLDKWVRLGVCELSCGAAISQVAQAKPWLDLSDRYFVLLGAGAAMGPLQVLLAHGANVIAVDLNLDKIWRRLIGLAKDSCGTLTFPLKEGCEQSRLSD-DELYTAAGCNLFTQTPEIKNWLLTVHPGKQLCVGGYAYLMGDLFPRVALAMDVIIKELTEKRKASV-AFLCTPTDCHLVPVGA 326          
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: W7TMF0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF0_9STRA)

HSP 1 Score: 308 bits (788), Expect = 5.590e-97
Identity = 172/334 (51.50%), Postives = 218/334 (65.27%), Query Frame = 1
Query:   31 LVW---PLVPNSKKAGDRS--------TTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGS--FETAVIKGTKPKPT-ETVLQVPYKDEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAA 990
            L+W   P VP  +K    S        +T+ NK A AAA+GAVD A   ++  E+ WRQKY KY+ + V+  L+S + AV+ ++ GLE+ + NFEF+R+GK+ KL  AM    GS  +ET VIKG    P    V QVPY  ++L G+AL  Q ++W  YGT+EPSA  AI  +    +  DLSD+YFVLLGAGSAMGP   LL LGANI+AIDLDR GIW+RL+     S GT+IFPLK  K Q++L +  E+ A AG NL   TPE+  WL  V   K LVVG+YAYLDGELHV++SLAMDAI++ LT  R+   PAYLCTPTDVHVI   A
Sbjct:   35 LIWGNQPRVPRDQKLASYSLRIKRAAGSTFGNKGAWAAAVGAVDKAEGLKIEKEKQWRQKYAKYIVRQVQVGLKSPKNAVSVAQGGLEYCYQNFEFIRDGKTYKLGEAMEKFGGSHSYETGVIKGEGKLPKFGPVCQVPYGKKVLEGEALRAQFEQWARYGTVEPSARDAISYLIDNPKVLDLSDKYFVLLGAGSAMGPFLTLLALGANIIAIDLDRQGIWERLIRETRKSPGTLIFPLK--KKQSTLKTDPEVAAQAGGNLFTDTPELRAWLMGVETGKDLVVGAYAYLDGELHVKVSLAMDAIIRDLTRLRK-ATPAYLCTPTDVHVISKEA 365          
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: A0A0L0GFC7_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GFC7_9EUKA)

HSP 1 Score: 305 bits (780), Expect = 1.050e-96
Identity = 163/310 (52.58%), Postives = 204/310 (65.81%), Query Frame = 1
Query:   43 LVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVH 972
            L P  +K G RST  A ++A AAAIGA++         E+ WR  Y K+V + VE  L+S E AV  ++AGL++VH++FEF R  K M ++ AMSSI  SFET  IKG K     T  ++PYK  +L G++L DQVDKWV  G IEP  G  IK  +    W DLSD+YFVLLGAGSAMGP   L +LGANI+A+DLDRPGIW+RL+     S  T+ FPLK  K QA  +S  EL A AG NL + TPEI NWL  V P K  ++G+YAYLDGELHVR+SLAMDAI+ G+ E R +   AYL TPT ++
Sbjct:   16 LFPKDRKGG-RSTQDAGREAYAAAIGAMEIRDGANCTAEKGWRYGYAKHVMQFVELSLKSPEHAVKGAQAGLDFVHDHFEFKRGDKIMSISEAMSSIKDSFETGYIKGEKGGEKVTEFEIPYKGRMLKGRSLCDQVDKWVLEGVIEPDCGEYIKAAATTKTWLDLSDKYFVLLGAGSAMGPFIALTKLGANIIALDLDRPGIWERLITTVRKSNATITFPLK--KAQAQCTSDTELFANAGCNLFSETPEIKNWLINVHPSKAFIIGAYAYLDGELHVRVSLAMDAIIAGVCEKRPEASAAYLMTPTHIY 322          
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: A0A6B2KYF3_9EUKA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYF3_9EUKA)

HSP 1 Score: 307 bits (786), Expect = 3.160e-95
Identity = 158/334 (47.31%), Postives = 219/334 (65.57%), Query Frame = 1
Query:    4 PPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRD-----VMPAYLCTPTDVHVIPSAA 990
            P +++  DGL +P+       G  S+T  NK A+AA++ A+ P  A+RV DERNWR +Y +++ ++V+ CL   E A+  S+AGL+++H NF F R  + M    AM++I  +F T ++KG K + T+T   VPYKD+ L G  L  Q+D+W  YGTIEP A  AI  V +  EW DLSD+YFVLLGAGSAMGPL +LL LGAN++A+DL+R  IW+ L    ++S GT+ +P++  KP    +S DE+  +AG NL    PEI NWL T+ P +PL+VG+YAYLDG LHV++S+AMD I+  L  +R       +  AYLCTPTDVHVI   A
Sbjct:  208 PATTQTFDGLEFPI---EAATGQPSSTILNKGAMAASVKAIKPEAAKRVEDERNWRFRYDRHLIENVKLCLADPEDAIKISQAGLDYLHENFSFYRNKEQMSFKDAMTNINSTFYTGILKGEKERTTKTYT-VPYKDKQLQGAELLKQLDEWAKYGTIEPEARDAIAMVVKNPEWLDLSDKYFVLLGAGSAMGPLLVLLSLGANVIAVDLNRENIWKNLFTQTKNSPGTLYYPIR--KPFEEYASEDEIVKSAGCNLFTEAPEIKNWLTTIVPNEPLIVGAYAYLDGPLHVKVSVAMDGIISALCNTRASPKGPGLTIAYLCTPTDVHVITDEA 535          
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Match: A0A448ZLX2_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLX2_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.660e-94
Identity = 167/326 (51.23%), Postives = 221/326 (67.79%), Query Frame = 1
Query:   19 PLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVR-EGKSMKLAAAMS-SITGSFETAVIKGTKPKPTETVLQVPYKDEILTGKALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAA 990
            P  G+V+P+    K    RS+T  NK+ LA+A+GAV+P+ A+++   + +R  Y K++   VE   +S EA +  ++AGL+  ++ FEFV  +G ++ +  AMS   T  F T  IKG   K T T+++VPYK  IL G++L+DQV KWV YGTIEPSAG AI        W DLSD+YFVLLGAGSAMGPL +LL LGAN++A+DLDRP IW+RL+ LA+ S GT+ FPLK+   Q+SL S D L AAAG NL  HTP I +WL  + P K   VGSYAYL+G LHV++SLAMDAI + L+E R     AYLCTPTD+H++P  A
Sbjct:  115 PPRGIVFPVEEGKKS---RSSTPVNKEILASAVGAVNPSKAEKIRSAKGYRFTYVKHLTGLVEEQCKSPEACLKIAQAGLDKAYDIFEFVAPDGSAVSVREAMSMKNTEKFCTGFIKGEGAKDT-TMMEVPYKGTILKGQSLKDQVKKWVDYGTIEPSAGEAIIGCVDNPNWCDLSDKYFVLLGAGSAMGPLLVLLALGANVIAVDLDRPNIWKRLIGLAKKSPGTITFPLKQ--EQSSLDSDDALYAAAGCNLFTHTPMIRDWLMDLYPGKSFTVGSYAYLNGALHVQVSLAMDAITRDLSEKRPGTSLAYLCTPTDLHLVPKEA 434          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1927.6174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB55_ECTSI1.970e-23198.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z6A9_9STRA1.240e-13160.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A139AEM4_GONPJ1.900e-10152.45Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
A0A7S3V160_9STRA4.780e-9950.45Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S3W6Z5_9SPIT1.900e-9748.92Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S4BKX7_CHRCT2.030e-9751.86Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
W7TMF0_9STRA5.590e-9751.50Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0L0GFC7_9EUKA1.050e-9652.58Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A6B2KYF3_9EUKA3.160e-9547.31Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A448ZLX2_9STRA1.660e-9451.23Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1927contigEcto-sp13_S_contig1927:1..3599 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score650.6
Seed ortholog evalue4e-184
Seed eggNOG ortholog2880.D8LB55
Model size990
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs2A24T@1,2RY25@2759
Cds size990
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462980.5705445-CDS-Ecto-sp13_S_contig1927:0..511681462980.5705445-CDS-Ecto-sp13_S_contig1927:0..51Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1927 1..51 -
1681462980.5830655-CDS-Ecto-sp13_S_contig1927:599..7351681462980.5830655-CDS-Ecto-sp13_S_contig1927:599..735Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1927 600..735 -
1681462980.593919-CDS-Ecto-sp13_S_contig1927:1107..15111681462980.593919-CDS-Ecto-sp13_S_contig1927:1107..1511Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1927 1108..1511 -
1681462980.6071386-CDS-Ecto-sp13_S_contig1927:3200..35991681462980.6071386-CDS-Ecto-sp13_S_contig1927:3200..3599Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1927 3201..3599 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1927.6174.1prot_Ecto-sp13_S_contig1927.6174.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1927 1..3599 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1927.6174.1

>prot_Ecto-sp13_S_contig1927.6174.1 ID=prot_Ecto-sp13_S_contig1927.6174.1|Name=mRNA_Ecto-sp13_S_contig1927.6174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp
MPPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRV
LDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGK
SMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGKALEDQV
DKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLL
ELGANIVAIDLDRPGIWQRLLALAESSCGTMIFPLKEGKPQASLSSRDEL
CAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDA
IVKGLTESRRDVMPAYLCTPTDVHVIPSAA
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mRNA from alignment at Ecto-sp13_S_contig1927:1..3599-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1927.6174.1 ID=mRNA_Ecto-sp13_S_contig1927.6174.1|Name=mRNA_Ecto-sp13_S_contig1927.6174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3599bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1927:1..3599- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGCCGTCTTCGCGTCCGCTGGACGGCCTGGTGTGGCCGCTCGTGCC GAACTCCAAGAAAGCCGGCGACCGCAGCACCACGTGGGCGAACAAGCAGG CGCTGGCAGCGGCGATCGGTGCTGTGGACCCCGCGCTGGCGCAGAGGGTT CTAGACGAGCGCAACTGGCGGCAAAAGTACACCAAGTACGTGTACAAGCA CGTGGAGGCGTGCCTGCAGAGCAAGGAGGCGGCCGTGGCCAGCAGCAAGG CGGGCCTGGAGTGGGTGCACAACAACTTCGAGTTCGTTCGGGAGGGCAAG AGCATGAAGCTCGCCGCGGCCATGTCGAGCATCACGGGGTCCTTCGAGAC CGCCGTCATCAAGGGCACCAAGCCCAAGCCCACGGAGACAGTGTTACAGG TGCGATGCCATGTGTGTGTGTCGGGCGAGATAAGTTACAAACAACTGCTG TCACAACTTTTGTAATGTTGGGAGCGTGCATCCGCATGCATGTTGCAGAC GCCACTGCTGTACAAATAGCGGCGTTTTCTCGATGGGCTGATCGTGATTG GAAATGTCGGCTGCTGGTTCTGCGTCCCAGCACGTGGGCGCTCATCATGT GTTGCTTTGCCATCCTTTTCGCGTCCAAGGATATTTCAAAGAGGTCTTGT GCACTCGAATTGCGCCAGAAGCGGGCAATTCAAGAAAAATCCCTCTCCTG ATAGATCTTCTGGAAGCGAACACAGGGAGGCCCTATGTTCGATGCTCATT GAAGAGTAGGCTTTTTGGTTGGGTGTTGTTTGATCGGTCGCGTGCATTCA TGTACAGCAGTAGTGCAACGATCGATGATGATGTGGACGATGATAACGCG CGGAGAGATTTGGATCCATTGAAGGGAGCACCCAACACCCATTCCTCGAG ACGTTCATCAATCGTACATAACATTGTACAGCAGTAACCATGAGCTATTG TAGACTGGTCTGTACGTCTGTCTGCGGGGGAACGAGCGACACAAGATTTC GGTTCTGCATCCCCACCATCAATTGCCACCATAACAAAAAAAACATGGAT GCCGTCATGCCGTCAGAGGGATCGCGGCCGATTTGCCGTTACCCCGCTTT TCTAGCCGTAGTACATATTTCCATGGGTCCCACGTGTGCCTGTCGAGTAG AGGGAAAAGCAATACCAAGTGCATAGACTTTGAGGGAGCGACTGTTTCAT AGTGGCATCAATTAACGCCGTACACAAACACAGGATTGATCCCGATGTAA CGACTTTCTGTTTGGCGACATGCCATGTGTAGGGGTCACAAGACCTCGTG GCACCGCTCCACCGCGGGTCATAACAGTCGAACGATCGGGTCGCCCCCGC GATGGCAACTTTCCGAGGTTTTTCAGCATGCATGGAAATATCGGTCATGG ATTCTATGTATTGCGGAGATTTCACAGTCTTTCATCCACACGTGAAGAGA GGCATACACCGCGGGCCGCACCGTACACATCAACGCACCATGCCGTGCGC CGCGCTGGAGAGTTGTGCACAATCTTCCGAATGTCGCACTTGATCCAACC GAGGAGAATGATTGGTCATGGTGGCAGTTGTGGACGTACACACGCACGGG AGGTGGAGGATCCAGATATCGACGGCGAGATGCAGCGCATTGTCAAGCTT GTGCAACCCAAGAGACGGATTTAGCACGTGTACTATGGCCATTCTGAACA AATTGTTAAGCACGCGGGCTTAACAACACCATACACAGGACACACGTTTG GGTACTGCTGTTGAGATATTTTGAGAGATATTTTGAAGGCAGATCCGGCG GTAGAACAACAGTCTTTGCTTTTCATCTGTATTTTTTGTTTACATGCAGG AGATGATTTAATCCGGGCTTGAAATAGCACGAAGGATCAGCAGTAACACA AAAACCACGCCGTTGCCACACCCTGAAACCTCCCCCGACCGCAGTAAGGT TACAACACACGGACGATGACGCGCAAGCAGGCCTTCGGGACGACGCCTGT ACTCTCAAGCAACACAATACCATTTCGGCACTCACGCACCTCTCCTCTCC TCTTGTGCCTGTGCGACGCACACCCACCCCACACACAGGTGCCCTACAAG GACGAGATCCTGACGGGAAAGGCCCTCGAAGACCAGGTGGACAAGTGGGT CTCCTACGGCACCATCGAGCCCAGCGCGGGGGCCGCCATCAAGGACGTCT CCCAGAAGGGGGAGTGGAGGGACCTGAGCGACAGGTATTTCGTTCTTCTC GGCGCGGGCTCGGCCATGGGTCCGCTGAAGCTACTGCTGGAGCTCGGCGC CAACATCGTGGCGATCGACTTGGATCGCCCCGGGATCTGGCAGCGGTTGC TGGCCCTGGCGGAAAGCTCGTGCGGGACGATGATCTTCCCGCTCAAGGAG GGGAAGCCGCAGGCGTCTCTGTCTAGCAGGGACGAGCTGTGCGCGGCGGC CGGGGCTAACCTCCTGGCGCACACCCCGGAGATTCTGAACTGGTGAGGGG GCAGCGGAAGAGGGGGAAGACCCAAGAAGAGAAAGCTGGGGCGTGGGCGC GGGGAATAGGAGAAGGATGGGAATGCGGGAGAGTACTGTACAGAGCTTGG GCGGACGCAACCGGTGAAGAAGTTTTGATTGTGCGGTAGTTCGCCTTCGG TGATGCCGGTGAACATTGCACTTCTTATCGCACCCGTCCACTCTGACAGC ATGGTATTCTCATGTTATTGCTTGGCTCTATGTTAGACGTGAGGCGTGAC ACTGCACACACCCTAAACCACTCCATGTTACTTCTGTGCATCTCAAGAAC ACCCTGGCGCGACCAGACCCTCCTCAACCCGACTGCTGTTTTTTTTGCGT TTTTTCATCCAAAGGCTGAAGACGGTTAGCCCAGAAAAGCCGCTGGTAGT GGGTTCTTACGCCTATCTGGACGGCGAGCTGCACGTCCGGCTGTCTCTCG CCATGGACGCGATCGTGAAGGGGCTGACGGAGTCGCGGCGCGACGTGATG GTGAGCGGCGGACGCTGCCACAGTTGCGATATCGGTAACAGCAGTGGGGT ATGTCAATAGTGCCGGTGGATGCCTGTCAGATTCGCCAGCATTGTTGAGA GAAGGAGGCAACTTGAAGGTTTCATCCTTGTAGTGCGATGTCACCGGCAT GTAGGACGGGCAGTGGCACTATCCAACGAAGGACCTCACTGCTGTACCTG CAGTATCTGTCCATAGATTTTCGTTGGCTGGTGGTCTTGAGGCGGCGAAG GTAGCATTGGCGAGCGTGCTTGAGAACTGGTTGGGTCGTCAGCAACCGGG AGATTTAAACCAAATCGCCCAAGAATTGCTCTTTATCTGTGTATGACTCT TTGTCTATGCATACCATCTATGACAGTTCTTTGTCATCAACGGTCCAATT GCCGTTTGTTGTCAAACAGACCATTTTTGAAGAGACCAAAGGAGCCCTCG CCCCGCCCGGGCGCGCGTCCAACTAAACAATTGTCCGTGTCGCGTGCTGA TGGTCCCCTTTCGCGCCCCGCTTCTGTCCTTTCCCCCCCAAATCCCAGCC GGCATACCTTTGCACGCCGACGGACGTCCACGTCATCCCGTCGGCGGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1927:1..3599-

>mRNA_Ecto-sp13_S_contig1927.6174.1 ID=mRNA_Ecto-sp13_S_contig1927.6174.1|Name=mRNA_Ecto-sp13_S_contig1927.6174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1927:1..3599- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGCCGTCTTCGCGTCCGCTGGACGGCCTGGTGTGGCCGCTCGTGCC
GAACTCCAAGAAAGCCGGCGACCGCAGCACCACGTGGGCGAACAAGCAGG
CGCTGGCAGCGGCGATCGGTGCTGTGGACCCCGCGCTGGCGCAGAGGGTT
CTAGACGAGCGCAACTGGCGGCAAAAGTACACCAAGTACGTGTACAAGCA
CGTGGAGGCGTGCCTGCAGAGCAAGGAGGCGGCCGTGGCCAGCAGCAAGG
CGGGCCTGGAGTGGGTGCACAACAACTTCGAGTTCGTTCGGGAGGGCAAG
AGCATGAAGCTCGCCGCGGCCATGTCGAGCATCACGGGGTCCTTCGAGAC
CGCCGTCATCAAGGGCACCAAGCCCAAGCCCACGGAGACAGTGTTACAGG
TGCCCTACAAGGACGAGATCCTGACGGGAAAGGCCCTCGAAGACCAGGTG
GACAAGTGGGTCTCCTACGGCACCATCGAGCCCAGCGCGGGGGCCGCCAT
CAAGGACGTCTCCCAGAAGGGGGAGTGGAGGGACCTGAGCGACAGGTATT
TCGTTCTTCTCGGCGCGGGCTCGGCCATGGGTCCGCTGAAGCTACTGCTG
GAGCTCGGCGCCAACATCGTGGCGATCGACTTGGATCGCCCCGGGATCTG
GCAGCGGTTGCTGGCCCTGGCGGAAAGCTCGTGCGGGACGATGATCTTCC
CGCTCAAGGAGGGGAAGCCGCAGGCGTCTCTGTCTAGCAGGGACGAGCTG
TGCGCGGCGGCCGGGGCTAACCTCCTGGCGCACACCCCGGAGATTCTGAA
CTGGCTGAAGACGGTTAGCCCAGAAAAGCCGCTGGTAGTGGGTTCTTACG
CCTATCTGGACGGCGAGCTGCACGTCCGGCTGTCTCTCGCCATGGACGCG
ATCGTGAAGGGGCTGACGGAGTCGCGGCGCGACGTGATGCCGGCATACCT
TTGCACGCCGACGGACGTCCACGTCATCCCGTCGGCGGCC
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