mRNA_Ecto-sp13_S_contig19269.6173.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: D7FZT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZT5_ECTSI) HSP 1 Score: 310 bits (794), Expect = 1.260e-103 Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 1
Query: 1 MVEFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLFGDYSWNRTDGPLPANVLRATTWAEVDAELQSIVGASSGDGSXXXXXXXRSPATTTGTPAGGTA 519
M+EFFK+PYFLDGIPPLAGAAEVLRKHSR+LTFYLVTSRQDSLQAHTKRWID HY GIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDN KYATECASAGIRTLLFGDY+WNRTDGPLPANVLR TWAEVDAELQSIV A SGDGS XXXXX RSPAT TGTPAGGTA
Sbjct: 1 MIEFFKTPYFLDGIPPLAGAAEVLRKHSRTLTFYLVTSRQDSLQAHTKRWIDAHYPGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNTKYATECASAGIRTLLFGDYAWNRTDGPLPANVLRVPTWAEVDAELQSIVDARSGDGSGXXXXXGRSPATITGTPAGGTA 173
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: A0A6H5KL00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL00_9PHAE) HSP 1 Score: 214 bits (544), Expect = 2.810e-67 Identity = 104/113 (92.04%), Postives = 106/113 (93.81%), Query Frame = 1
Query: 1 MVEFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLFGDY 339
MVEFFKSPYFLDGIPPLAGAAEVLRKHSRSL FYLVTSRQDSLQAHTKRWID HY GIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDN YATECASAGIR+LLF +
Sbjct: 43 MVEFFKSPYFLDGIPPLAGAAEVLRKHSRSLNFYLVTSRQDSLQAHTKRWIDAHYPGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNTTYATECASAGIRSLLFAPH 155
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: A0A835ZHF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHF5_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.650e-42 Identity = 71/135 (52.59%), Postives = 98/135 (72.59%), Query Frame = 1
Query: 37 GIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLFGDYSWNRTDGPLPANVLRATTWAEVDAELQSIVGASS 441
GIP +AGA EVL+K++ F++VTSRQ+ L+A T RW+ Y G+F G+ FGNH++ EG RSKPD+C+ IGA ++IDD+++YAT+CASAGI +LFGDY+WN G PA V RA+ WA+VD L + + S
Sbjct: 27 GIPIIAGAKEVLKKYADRFDFHVVTSRQNLLEAETLRWLKHWYPGVFRGVEFGNHYAQEGIHRSKPDMCKEIGACLLIDDSMRYATQCASAGIPVVLFGDYAWNA--GKAPAGVQRASDWAQVDRILSDLASSRS 159
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: A0A6J1JK81_CUCMA (uncharacterized protein LOC111485341 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JK81_CUCMA) HSP 1 Score: 140 bits (354), Expect = 3.000e-37 Identity = 71/148 (47.97%), Postives = 97/148 (65.54%), Query Frame = 1
Query: 7 EFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLF---GDYSWNRTD-GPLPANVLRATTWAEVDAELQSIVGAS 438
EFFK+PYF GI P+ GA +L K SR +VTSRQ++++ HT +WID HY G+F + FGNHF+ +G RSK ++C+ +GA ++IDDN +YA ECA AGIR LLF Y W +T LPA V + W +V+ +L S V +S
Sbjct: 170 EFFKTPYFQSGIWPIPGAQSMLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTGYEDLPALVTKVHNWEDVEQQLTSWVRSS 317
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: A0A0A0LX27_CUCSA (Uncharacterized protein n=2 Tax=Cucumis sativus TaxID=3659 RepID=A0A0A0LX27_CUCSA) HSP 1 Score: 141 bits (355), Expect = 4.210e-37 Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 7 EFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLF---GDYSWNRTD-GPLPANVLRATTWAEVDAELQSIV 429
EFFK+PYF GI P+ GA L K SR +VTSRQ++++ HT WI+ HY G+F + FGNHF+ +G RSK ++C+ GA ++IDDN +YA ECA AGIR LLF Y W +T+ G LP V + W EV+ +L S V
Sbjct: 201 EFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYQGLFQEIHFGNHFALDGESRSKAEICKSFGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECGDLPPLVTKVHNWEEVEKQLASCV 345
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: A0A1S3BQG9_CUCME (uncharacterized protein LOC103492406 isoform X1 n=4 Tax=Benincaseae TaxID=1003877 RepID=A0A1S3BQG9_CUCME) HSP 1 Score: 140 bits (352), Expect = 7.760e-37 Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 7 EFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLF---GDYSWNRTD-GPLPANVLRATTWAEVDAELQSIV 429
EFFK+PYF GI P+ GA L K SR +VTSRQ++++ HT WI+ HY G+F + FGNHF+ +G RSK ++C+ +GA ++IDDN +YA ECA AGIR LLF Y W +T+ G LP V + W EV+ L S V
Sbjct: 183 EFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECGNLPPLVTKVHNWEEVEKHLASCV 327
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: UPI0011D1A36E (uncharacterized protein LOC115671235 n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D1A36E) HSP 1 Score: 138 bits (348), Expect = 5.900e-36 Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 7 EFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLF---GDYSWNRTDG----PLPANVLRATTWAEVDAELQSIVGA 435
EFFK+PYF GI PL GA VL K +R F +VTSRQ++++ HT WID HY G+F + FGNHF+ G R K ++CR +GA+++IDDN +YA ECA GI+ LLF Y W +T+ PL V + W EV+ L S+V A
Sbjct: 215 EFFKTPYFKKGIHPLPGAQRVLHKLARHCKFSVVTSRQNAIKDHTIEWIDKHYPGLFEEIHFGNHFALNGESRPKSEICRSLGAKVLIDDNPRYAIECADVGIKVLLFDYENSYPWCKTESIDKHPL---VTKVRNWEEVEQRLVSLVAA 361
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: A0A803NUY6_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NUY6_CANSA) HSP 1 Score: 134 bits (336), Expect = 7.890e-36 Identity = 67/148 (45.27%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 7 EFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLF---GDYSWNRTDG----PLPANVLRATTWAEVDAELQSIV 429
EFFK+PYF GI PL GA + + K SR + +VTSRQ++++ HT +WI+ H+ G+F + FGNHF+ GA R K D+CR +GA+++IDDN +YA ECA+ GIR LLF Y W + + PL V + W EV+ +L ++V
Sbjct: 56 EFFKTPYFKTGIHPLPGAQKAIHKLSRFCSLSVVTSRQNAIKDHTIQWIEEHFPGLFQEIHFGNHFALNGASRPKSDICRSLGAKVLIDDNPRYAIECANVGIRVLLFDYENSYPWCKINSIDEHPL---VTKVHNWDEVEQQLNTLV 200
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: A0A7J8VHD6_9ROSI (Uncharacterized protein n=1 Tax=Gossypium klotzschianum TaxID=34286 RepID=A0A7J8VHD6_9ROSI) HSP 1 Score: 132 bits (331), Expect = 1.260e-35 Identity = 66/146 (45.21%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 7 EFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLF---GDYSWNRT----DGPLPANVLRATTWAEVDAELQS 423
EFFK+PYF +GI PL GA L K SR +VTSRQ+ ++ HT W++ HY G+F + FGNHF+ +G R K ++CR++GA+++IDDN +YA ECA GIR LLF Y W +T + PL V + +W EV+ ++ S
Sbjct: 8 EFFKTPYFKNGIHPLPGAQRALHKLSRFCNLSVVTSRQNVIKDHTIEWLEKHYPGLFHEIHFGNHFALDGESRPKSEICRLLGAKILIDDNPRYAIECAQVGIRVLLFDYENSYPWCKTKSIDEHPL---VTKVHSWEEVEQQIAS 150
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Match: A0A1Q3C1J2_CEPFO (NT5C domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C1J2_CEPFO) HSP 1 Score: 137 bits (344), Expect = 1.430e-35 Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 7 EFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWIDTHYHGIFAGLRFGNHFSTEGAVRSKPDLCRMIGAEMIIDDNIKYATECASAGIRTLLF---GDYSWNRTDG----PLPANVLRATTWAEVDAELQS 423
EFFK+PYF GI P+ GA L + SR +VTSRQ++++ HT WI+ HYHG+F + FGNHF+ +G RSK ++CR +GA+++IDDN +YA ECA AG+R LLF Y W +TD PL V + W EV+ L S
Sbjct: 192 EFFKTPYFKTGIHPIPGAQNALHRLSRLYNLSVVTSRQNAIKDHTIEWIEKHYHGLFQEIHFGNHFALDGESRSKSEICRSLGAKVLIDDNPRYAIECAEAGMRVLLFDYENSYPWCKTDSINQHPL---VTKVHNWEEVEELLVS 334 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19269.6173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19269.6173.1 >prot_Ecto-sp13_S_contig19269.6173.1 ID=prot_Ecto-sp13_S_contig19269.6173.1|Name=mRNA_Ecto-sp13_S_contig19269.6173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp MVEFFKSPYFLDGIPPLAGAAEVLRKHSRSLTFYLVTSRQDSLQAHTKRWback to top mRNA from alignment at Ecto-sp13_S_contig19269:307..3194+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19269.6173.1 ID=mRNA_Ecto-sp13_S_contig19269.6173.1|Name=mRNA_Ecto-sp13_S_contig19269.6173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2888bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19269:307..3194+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19269:307..3194+ >mRNA_Ecto-sp13_S_contig19269.6173.1 ID=mRNA_Ecto-sp13_S_contig19269.6173.1|Name=mRNA_Ecto-sp13_S_contig19269.6173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19269:307..3194+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |