mRNA_Ecto-sp13_S_contig1924.6159.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE) HSP 1 Score: 360 bits (923), Expect = 2.490e-118 Identity = 188/210 (89.52%), Postives = 195/210 (92.86%), Query Frame = 2
Query: 2 FIISGFEDLFALWALSTTPAGGLDWSADQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLMIASVGLLFTIYAPCDAFYTCLSCAINNAAEPERCGEVNGLAACVASVVGAVGPAAWSALYAFSVEIADGRSPILFPIDFRLAFWLMAFLRLVLAILSWSTIKGDKADERRVDTLPETVEE 631
FIISGFEDLFALWALSTTP GGLDWSA+QIGQVLLASGLMVFVFELFAVPLVTKRLGVT SQRLSS+TLV V P VPVLGRL +TG LLMIASVGLLFT+Y+ CDAFYTC+S AINNAAEPERCGEVNGLAACVASVV AVGPAAWSALYAFSVE ADGRSP FPIDFRLAFWLMAFLRLV+AILSWSTIKGDKA ERRVDT PETVEE
Sbjct: 258 FIISGFEDLFALWALSTTPVGGLDWSAEQIGQVLLASGLMVFVFELFAVPLVTKRLGVTISQRLSSITLVFVLPLVPVLGRLPNTGHLLMIASVGLLFTVYSTCDAFYTCISFAINNAAEPERCGEVNGLAACVASVVSAVGPAAWSALYAFSVEFADGRSPFPFPIDFRLAFWLMAFLRLVVAILSWSTIKGDKAHERRVDTPPETVEE 467
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: D8LFV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV4_ECTSI) HSP 1 Score: 306 bits (783), Expect = 2.490e-100 Identity = 161/186 (86.56%), Postives = 168/186 (90.32%), Query Frame = 2
Query: 2 FIISGFEDLFALWALSTTPAGGLDWSADQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLMIASVGLLFTIYAPCDAFYTCLSCAINNAAEPERCGEVNGLAACVASVVGAVGPAAWSALYAFSVEIADGRSPILFPIDFRLAFWLMAFLRLVLAIL 559
FIISGFEDLFALWALSTTPAGGL WSA+QIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLV V P VPVLG LL+ G LLMIASVGLLF IYAPCDAF TC+S INNAAEPERCGE+NGLAACVASVV VGP+AWS LYAFSVE+ DG SP FPIDFRLAFWLMAFLRLV+AIL
Sbjct: 60 FIISGFEDLFALWALSTTPAGGLGWSAEQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVFVLPLVPVLGHLLNAGHLLMIASVGLLFKIYAPCDAFLTCISFTINNAAEPERCGELNGLAACVASVVSKVGPSAWSTLYAFSVEVTDGGSPFPFPIDFRLAFWLMAFLRLVVAIL 245
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: A0A6H5JCE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE3_9PHAE) HSP 1 Score: 134 bits (336), Expect = 2.130e-32 Identity = 83/123 (67.48%), Postives = 86/123 (69.92%), Query Frame = 2
Query: 23 DLFALWALSTTPAGGLDWSADQIGQV---------------------------LLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLMIASVGLLFTIYAP 310
DLFALWALSTTPAGGL+ SA+QIGQV LLA LMVFVFELFAVPL TKRLGVTTSQRLSSVTLVLVSP VPV G LL+TGPLLMIASVGLL I AP
Sbjct: 214 DLFALWALSTTPAGGLEGSAEQIGQVALPAMYCTGSRGEHGPTGITKGSTQMVLLAPRLMVFVFELFAVPLGTKRLGVTTSQRLSSVTLVLVSPLVPVPGFLLNTGPLLMIASVGLLLKINAP 336
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 132 bits (333), Expect = 2.310e-30 Identity = 78/194 (40.21%), Postives = 115/194 (59.28%), Query Frame = 2
Query: 2 FIISGFEDLFALWALSTTPAGGLDWSADQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLMIASVGLLFTIYAPCDAFYTCLSCAINNAAEPERCGEVNGLAACVASVVGAVGPAAWSALYAFSVEIADGRSPILFPIDFRLAFWLMAFLRLVLAILSWSTIKGD 583
F + GF +++ LWALST +GGLDW+ QIGQVL G+ + F+L P ++KR+GVT SQR + + V F P L RL +G L++ S+ L F A + ++ A NNA EP R +NGL+ + S+ A GPA +SA++A+S++ DGR P FP+D+ L F+L+A + SW+ I D
Sbjct: 479 FSLIGFGEIYPLWALSTVASGGLDWTTKQIGQVLSLVGVGMLAFQLVVYPWLSKRIGVTRSQRWACFLAIPVYAFFPFLSRLRGSGVPLVVGSIVLNFFSNVTATAVFINIALATNNAVEPSRRATLNGLSMTLGSLAKAAGPAFFSAIFAWSID-DDGRRP--FPLDYHLVFYLLALSMTAVCWASWNVIIDD 669
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 123 bits (308), Expect = 4.370e-27 Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 2
Query: 2 FIISGFEDLFALWALSTTPAGGLDWSADQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLMIASVGLLFTIYAPCDAFYTCLSCAINNAAEPERCGEVNGLAACVASVVGAVGPAAWSALYAFSVEIADGRSPILFPIDFRLAFWLMAFLRLVLAILSWSTI 574
F+ G +L+ LWALST +GGLDWS+ QIGQ L G+ + F+L P ++KR+G T SQR + + V P L L T L+ AS+ LLF A + + ++ A NNA EP R G + GL+ S+ A GP +S+++A+S+ DGR FP+D+ LAF+L+A ++++ SW TI
Sbjct: 436 FVAIGNRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVEPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSI---DGRRRP-FPLDYHLAFYLLALGMVLVSWASWGTI 622
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 7.910e-17 Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 2
Query: 89 IGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLMIASVGLLFTIYAPCDAFYTCLSCAINNAAEPERCGEVNGLAACVASVVGAVGPAAWSALYAFSVEIADGRSPILFPIDFRLAFWLMA 532
I VL G+ + F+L P ++KR+GVT SQR + +LV P L RL +G LL++ S+ L F A +T ++ A NNA EP R +NGL+ + S+ AVGPA +SA++A+S++ DGR P FP+D+ L F+L+A
Sbjct: 550 IYSVLSLVGVGMLTFQLVVYPWLSKRIGVTGSQRWACFLAILVYAVFPFLSRLRGSGVLLVVGSIVLNFFSNVTATAVFTNVALATNNAVEPSRWATLNGLSMMLGSLAKAVGPAFFSAIFAWSID-DDGRRP--FPLDYHLVFYLLA 694
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: A0A6H5KYW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW2_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 2.070e-13 Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 2
Query: 131 FELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLMIASVGLLFTIYAPCDAFYTCLSCAINNAAEPERCGEVNGLAACVASVVGAVGPAAWSALYAFSVEIADGRSPILFPIDFRLAFWLMAFLRLVLAILSWSTI 574
F+L P ++KR+G T SQR + + V P L L DT L+ AS+ LLF A + + ++ A NNA P R G + GL+ S+ A GP +S+++A+S+ DGR FP+D+ LAF+L+A +V++ SW TI
Sbjct: 4 FQLLLYPRLSKRIGATRSQRWACFLSIPVFIVFPTLSHLRDTERTLVAASLVLLFLTNAVANTVFINVALATNNAVGPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSI---DGRRRP-FPLDYHLAFYLLALGMVVVSWASWGTI 147
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: A0A8B7DLY0_HYDVU (probable peptide/nitrate transporter At3g43790 n=2 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DLY0_HYDVU) HSP 1 Score: 78.6 bits (192), Expect = 2.670e-12 Identity = 62/202 (30.69%), Postives = 104/202 (51.49%), Query Frame = 2
Query: 2 FIISGFEDLFALWALSTTPAGGLDWSADQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLM---IASVGLLFTIYAPCDAFYTCLSCAINNAAEPERCGEVNGLAACVASVVGAVGPAAWSALYAFSVEIADGRSPILFPIDFRLAFWLMAFLRLVLAILSW---STIKGDKA 589
F I GF +L ALW ++ GGL + D+IG LL ++ V + + +R G + + + + LV + P + R+ + +M + VGLL I +C++ INN+ ++ G VNGLA V ++ P + +L+A+S+ D + FPID+RLAF+ +AF L++ +LS+ +I G KA
Sbjct: 242 FCIIGFSELSALWMATSLNYGGLSFDTDKIGIALLVPAVLSVVLQPILFSRLERRFGGILTLQATILILVATTAMFPFI-RIFHSNKGIMWFLLIFVGLLRMIADISSR--SCIALFINNSVYSDQVGRVNGLAFSVQEIMRVASPTMFGSLFAWSIN--DIYHQVKFPIDYRLAFFAIAFFTLIILLLSFLLPKSINGPKA 438
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: A0A7M5URD3_9CNID (MFS domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5URD3_9CNID) HSP 1 Score: 77.8 bits (190), Expect = 5.810e-12 Identity = 64/221 (28.96%), Postives = 107/221 (48.42%), Query Frame = 2
Query: 2 FIISGFEDLFALWALSTTPAGGLDWSADQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVL-----------GRLLDTGPLLMIASVGLLFTIYAPCDAFYTCLSCAINNAAEPERCGEVNGLAACVASVVGAVGPAAWSALYAFSVEIADGRSPILFPIDFRLAFWLMA---FLRLVLAILSWSTIKGDKADERRVDTLPET 622
F I GF +L +LW + + GGL++S D+IG LL ++ + + KR G + +LS + L + + F P + L+ TG + MIA + + L+ INN+ PE+ G VNG A V ++ P + AL++++++ + I+FPID+RL F ++A F LVL +L +I KA + ++L T
Sbjct: 306 FCIIGFSELSSLWMATNSKYGGLNFSTDKIGTALLVPAIVSVIIQPIVFGRFEKRFGGIKTLQLSLLILAIFTFFFPFIHYTIKSRKLLWSLLITTGMVRMIADIS-----------SRSALALFINNSVYPEQAGRVNGFAFSVQEIMRVASPTMFGALFSWAID--SQQHQIIFPIDYRLPFLIIAIVIFGILVLTLLLPLSINAAKAVKDSPESLRPT 513
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Match: UPI00138FBEE1 (probable peptide/nitrate transporter At3g43790 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FBEE1) HSP 1 Score: 71.6 bits (174), Expect = 6.300e-10 Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 2
Query: 14 GFEDLFALWALSTTPAGGLDWSADQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLMIASVGLLFTIYAPCDAFYTCLSCAINNAAEPERCGEVNGLAACVASVVGAVGPAAWSALYAFSVEIADGRSPILFPIDFRLAFWLMAFLRLV 547
G ++LF LW + GGL +S DQIG VLL SGL++ +P + +++G ++ + + + +P L D L + ++ T + + + INN+ E G VNGL+ V SV A+ P+A +L+A+S I++G + FP + LAF + +RL+
Sbjct: 353 GTDELFNLWVATEPRYGGLGFSTDQIGTVLLISGLVLTFLGPTVLPKIEQKIGSILMFQIFATLAIFTTIILPCLRAAYDMPVTLWTCFLPIVMTHQLSANGSFLAVFIFINNSVPSELLGTVNGLSMAVTSVFRALAPSASGSLFAWS--ISEGYK-LGFPFNVNLAFIFLGLIRLL 527 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1924.6159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1924.6159.1 >prot_Ecto-sp13_S_contig1924.6159.1 ID=prot_Ecto-sp13_S_contig1924.6159.1|Name=mRNA_Ecto-sp13_S_contig1924.6159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp MVFVFELFAVPLVTKRLGVTTSQRLSSVTLVLVSPFVPVLGRLLDTGPLLback to top mRNA from alignment at Ecto-sp13_S_contig1924:10715..12682- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1924.6159.1 ID=mRNA_Ecto-sp13_S_contig1924.6159.1|Name=mRNA_Ecto-sp13_S_contig1924.6159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1968bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1924:10715..12682- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1924:10715..12682- >mRNA_Ecto-sp13_S_contig1924.6159.1 ID=mRNA_Ecto-sp13_S_contig1924.6159.1|Name=mRNA_Ecto-sp13_S_contig1924.6159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=516bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1924:10715..12682- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |