prot_Ecto-sp13_S_contig1921.6142.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1921.6142.1
Unique Nameprot_Ecto-sp13_S_contig1921.6142.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length430
Homology
BLAST of mRNA_Ecto-sp13_S_contig1921.6142.1 vs. uniprot
Match: A0A6H5JMA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA0_9PHAE)

HSP 1 Score: 685 bits (1768), Expect = 6.530e-223
Identity = 382/429 (89.04%), Postives = 396/429 (92.31%), Query Frame = 0
Query:    1 MSRAVAGRRLRAWLERRRRRLEATRAAEDHRAQAAVNPGAARWRRQRRRDQQLRMEAAWSSWRATTRRRKTSRSARRAVVEAIESRLRSGAIGAWRDFADGRLRRRGLLAEAAQERARRLKGKGLRGLKVGALDVRAPRDAVWVGDEHWRRRGVAIVVARLRNLAKSRRRMVRRAAALCLRVAARAGLTRWRHSARDSRVARDACAKGEAWRRKKSRRDGVSVLSGRLGRRAEQNRMIRVGTLHLSRRLAGRAVAAWREWTRRRAAGVDLCEGASALHRSWVLSAGLRALDRVARARTSRREAIIVAERHLLRFYGLGWWRAAAASRRRARNRAERATVHWARTLSSKVLISWEAAALQQWAETRQEEAAASHERLASKRRALRAWMARVRAGRRCLLCVRSRGVGVSFAEERAGREGGLFSSNGIYSR 429
            MSRAVAGRRLRAW+ERRRRRLEATRAAEDHRA+AAVNPGAARWRRQRRRDQQLRMEAAWSSWR TTR RK SRSARRAVVEA+ESRLRS AIGAWRDF DGRL RRGLLAEAAQ RARRLK KGLRG+K GALD RAPRDAVWVGDEHWRRR  AIVVARLRNLA+SRRRMVRRAAALCLRVAARAGLTRWR SARD RVAR+AC KGEAWRR K+RRDGVSVLSGRLGRRA+ +R IRV TLHLSRRLAGRAVA WR WTRRRAA  DL EGASALHRSW+LSAGLRALDRVARARTSRREAI+VAERHLLRFYGLG WRAAAASRRRAR+RAE ATVHWARTLSSKVLISWEAA+LQQWAETRQEEAAA HERLASKRRALRAWM RVR+ RRCLLCV SRGVGVS AEERAG EGGL SSNGIYSR
Sbjct: 2283 MSRAVAGRRLRAWVERRRRRLEATRAAEDHRARAAVNPGAARWRRQRRRDQQLRMEAAWSSWRETTRGRKMSRSARRAVVEAVESRLRSSAIGAWRDFVDGRLARRGLLAEAAQSRARRLKRKGLRGVKGGALDARAPRDAVWVGDEHWRRRRAAIVVARLRNLAESRRRMVRRAAALCLRVAARAGLTRWRQSARDWRVAREACVKGEAWRRDKARRDGVSVLSGRLGRRAKHDRAIRVSTLHLSRRLAGRAVAVWRGWTRRRAAAADLYEGASALHRSWILSAGLRALDRVARARTSRREAIVVAERHLLRFYGLGRWRAAAASRRRARSRAEIATVHWARTLSSKVLISWEAASLQQWAETRQEEAAARHERLASKRRALRAWMTRVRSRRRCLLCVGSRGVGVSLAEERAGSEGGLLSSNGIYSR 2711          
BLAST of mRNA_Ecto-sp13_S_contig1921.6142.1 vs. uniprot
Match: D7G051_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G051_ECTSI)

HSP 1 Score: 619 bits (1597), Expect = 3.040e-220
Identity = 349/403 (86.60%), Postives = 364/403 (90.32%), Query Frame = 0
Query:    1 MSRAVAGRRLRAWLERRRRRLEATRAAEDHRAQAAVNPGAARWRRQRRRDQQLRMEAAWSSWRATTRRRKTSRSARRAVVEAIESRLRSGAIGAWRDFADGRLRRRGLLAEAAQERARRLKGKGLRGLKVGALDVRAPRDAVWVGDEHWRRRGVAIVVARLRNLAKSRRRMVRRAAALCLRVAARAGLTRWRHSARDSRVARDACAKGEAWRRKKSRRDGVSVLSGRLGRRAEQNRMIRVGTLHLSRRLAGRAVAAWREWTRRRAAGVDLCEGASALHRSWVLSAGLRALDRVARARTSRREAIIVAERHLLRFYGLGWWRAAAASRRRARNRAERATVHWARTLSSKVLISWEAAALQQWAETRQEEAAASHERLASKRRALRAWMARVRAGRRCLLCVRSR 403
            +SRAVAGR LRAW+ERRRRRLEATRAAEDHRA+AAV+PGAARWRRQRRRDQQLRMEAAWSSWRATTR R+TSRSARRAVVEA+ESRLRSGAIGAWR FADGRLRRRGLLAEAAQ RARRLKGKGLRGLK GALD RAPRDAVWVGDEHWRRRG AIVVARLRNL +SRRRMVRRAAALCLRVAARAGLTRWR SARDSRVAR+AC KGEAWRR+K+RRDGVS+LSGRLG RAEQ                  AVAAWR WTRRRAA  DL EGASALHRSWVLSAG+RALDRVARARTSRREAI+VAERHLLRFYGLG WRAAAASRRRAR+RAE ATVHWARTLSSKVLISWEAAALQQWAETRQEEAAA HERLA KRRALRAWMARVR+  RCLLCVRSR
Sbjct:   19 LSRAVAGRWLRAWVERRRRRLEATRAAEDHRARAAVSPGAARWRRQRRRDQQLRMEAAWSSWRATTRGRRTSRSARRAVVEAVESRLRSGAIGAWRGFADGRLRRRGLLAEAAQSRARRLKGKGLRGLKGGALDARAPRDAVWVGDEHWRRRGAAIVVARLRNLTESRRRMVRRAAALCLRVAARAGLTRWRQSARDSRVAREACVKGEAWRREKARRDGVSMLSGRLGGRAEQKXXXXXXXXXXXXXXXXXAVAAWRGWTRRRAAAADLYEGASALHRSWVLSAGMRALDRVARARTSRREAIVVAERHLLRFYGLGRWRAAAASRRRARSRAEIATVHWARTLSSKVLISWEAAALQQWAETRQEEAAARHERLAGKRRALRAWMARVRSRPRCLLCVRSR 421          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1921.6142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMA0_9PHAE6.530e-22389.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G051_ECTSI3.040e-22086.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1921contigEcto-sp13_S_contig1921:1122..3583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1921.6142.1mRNA_Ecto-sp13_S_contig1921.6142.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1921 1068..3594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1921.6142.1 ID=prot_Ecto-sp13_S_contig1921.6142.1|Name=mRNA_Ecto-sp13_S_contig1921.6142.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=430bp
MSRAVAGRRLRAWLERRRRRLEATRAAEDHRAQAAVNPGAARWRRQRRRD
QQLRMEAAWSSWRATTRRRKTSRSARRAVVEAIESRLRSGAIGAWRDFAD
GRLRRRGLLAEAAQERARRLKGKGLRGLKVGALDVRAPRDAVWVGDEHWR
RRGVAIVVARLRNLAKSRRRMVRRAAALCLRVAARAGLTRWRHSARDSRV
ARDACAKGEAWRRKKSRRDGVSVLSGRLGRRAEQNRMIRVGTLHLSRRLA
GRAVAAWREWTRRRAAGVDLCEGASALHRSWVLSAGLRALDRVARARTSR
REAIIVAERHLLRFYGLGWWRAAAASRRRARNRAERATVHWARTLSSKVL
ISWEAAALQQWAETRQEEAAASHERLASKRRALRAWMARVRAGRRCLLCV
RSRGVGVSFAEERAGREGGLFSSNGIYSR*
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