prot_Ecto-sp13_S_contig19205.6138.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19205.6138.1
Unique Nameprot_Ecto-sp13_S_contig19205.6138.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length61
Homology
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: A0A6H5KSQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ9_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.440e-29
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0
Query:    1 SESPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFPEVVASHGGPQA 61
            SESPVEEF IRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPA+SFPEVVASHGGPQA
Sbjct:   30 SESPVEEFVIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPASSFPEVVASHGGPQA 90          
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: D7G221_ECTSI (Similar to 1-Aminocyclopropane-1-Carboxylate Deaminase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G221_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.430e-22
Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    1 SESPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFPE 51
            SESPVEEF IRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPA+SFPE
Sbjct:  187 SESPVEEFVIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPASSFPE 237          
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: A0A835YPC9_9STRA (Tryptophan synthase beta subunit-like PLP-dependent enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPC9_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.220e-17
Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 SESPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFPEVVASHGGPQ 60
            ++SPV+ F IRGR VLVKRDDKMRL  SG+SGNKARKLY  N TPA   P++V SHGG Q
Sbjct:    3 TQSPVDTFTIRGRTVLVKRDDKMRLKGSGISGNKARKLYTFNATPADQLPDLVVSHGGAQ 62          
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: A0A448Z2S8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z2S8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 8.390e-14
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 SESPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFPEVVASHGGPQ 60
            S SPVE   IRGR V VK DD++RLA SG+SGNKARK++ LN+ PA  FP  + S+GGPQ
Sbjct:   45 SPSPVEIRTIRGRTVHVKHDDQLRLAGSGISGNKARKMWTLNEIPAEEFPSCLVSYGGPQ 104          
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: A0A7S2DJY8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJY8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 9.340e-13
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    3 SPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFPEVVASHGGPQ 60
            S VE   +RGRR+ VKRDDK RL E+GL GNKARKLY+LN    + FP+ + SHGGPQ
Sbjct:   58 SRVEAVEVRGRRIFVKRDDKYRLPETGLCGNKARKLYSLNNL--SPFPQDLVSHGGPQ 113          
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: A0A7S1TP75_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP75_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.290e-10
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    2 ESPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFPEVVASHGGPQ 60
            ++ V+E  IRG  VLVKRDD++RL +SG+ GNK RKL+ LN      FP  +AS GGPQ
Sbjct:  113 DTDVDEVMIRGAPVLVKRDDQLRLLDSGVFGNKGRKLWWLNSRTEQQFPASLASFGGPQ 171          
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: A0A7S4CGT2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CGT2_9EUGL)

HSP 1 Score: 60.8 bits (146), Expect = 2.520e-9
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    3 SPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFPEVVASHGGPQ 60
            S V+ F +RG ++ VKRDD++RL  + LSGNKARK+YAL++      P ++ S+GG Q
Sbjct:  114 SGVDAFTVRGHKIFVKRDDQLRLPGTNLSGNKARKMYALHRWGPGQVPRMLVSYGGAQ 171          
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: R1FIR6_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FIR6_EMIHU)

HSP 1 Score: 53.5 bits (127), Expect = 9.420e-7
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    3 SPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFPEVVASHGGPQ 60
            SP+E F++RG ++LVKRDD++ L  SG+SGNKARKL AL        P ++ S GG Q
Sbjct:   17 SPIEAFSLRGTQLLVKRDDRLALG-SGVSGNKARKLLALEAMSPG--PSLIGSFGGHQ 71          
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: R1DYP1_EMIHU (Selenoprotein O n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DYP1_EMIHU)

HSP 1 Score: 53.5 bits (127), Expect = 9.860e-7
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    3 SPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFPEVVASHGGPQ 60
            SP+E F++RG ++LVKRDD++ L  SG+SGNKARKL AL        P ++ S GG Q
Sbjct:   17 SPIEAFSLRGTQLLVKRDDRLALG-SGVSGNKARKLLALEAMSPG--PSLIGSFGGHQ 71          
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Match: A0A7S4E2R7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2R7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.410e-6
Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    3 SPVEEFAIRGRRVLVKRDDKMRLAE--SGLSGNKARKLYALNKTPAASFPEVVASHGGPQ 60
            SP++ F +RGR VLVKRDD+  L    SG++GNKARKLY L K       E VAS GG Q
Sbjct:   24 SPLQPFTVRGRSVLVKRDDRYALPGVLSGVAGNKARKLYGLYKRGFGDA-EAVASLGGHQ 82          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19205.6138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KSQ9_9PHAE1.440e-2996.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G221_ECTSI1.430e-2296.08Similar to 1-Aminocyclopropane-1-Carboxylate Deami... [more]
A0A835YPC9_9STRA1.220e-1768.33Tryptophan synthase beta subunit-like PLP-dependen... [more]
A0A448Z2S8_9STRA8.390e-1461.67Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2DJY8_9STRA9.340e-1362.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1TP75_9STRA7.290e-1054.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4CGT2_9EUGL2.520e-948.28Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
R1FIR6_EMIHU9.420e-751.72Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
R1DYP1_EMIHU9.860e-751.72Selenoprotein O n=1 Tax=Emiliania huxleyi TaxID=29... [more]
A0A7S4E2R7_9STRA2.410e-655.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1100coord: 11..32
e-value: 2.2E-5
score: 25.8
NoneNo IPR availableGENE3D3.40.50.1100coord: 33..60
e-value: 2.2E-5
score: 25.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19205contigEcto-sp13_S_contig19205:348..1275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19205.6138.1mRNA_Ecto-sp13_S_contig19205.6138.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19205 348..1275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19205.6138.1 ID=prot_Ecto-sp13_S_contig19205.6138.1|Name=mRNA_Ecto-sp13_S_contig19205.6138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=61bp
SESPVEEFAIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPAASFP
EVVASHGGPQA
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