prot_Ecto-sp13_S_contig19176.6123.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19176.6123.1
Unique Nameprot_Ecto-sp13_S_contig19176.6123.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length70
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19176.6123.1 vs. uniprot
Match: A0A6H5KN14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN14_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 2.680e-18
Identity = 45/69 (65.22%), Postives = 50/69 (72.46%), Query Frame = 0 
Query:    1 MLEKAVGLDHPDVATVLHNRAGALIAQENHKEAFPLLERALTIRTKKLGENHPDTVGTRNRLEFVREKV 69
            + EKA GLDHP+ ATVLH+ AG LIAQE +          L IRTKKLGENHPDTV TRN LE+VREKV
Sbjct:  149 IFEKACGLDHPNSATVLHSLAGVLIAQEKYTRRH-FHHWMLRIRTKKLGENHPDTVWTRNSLEYVREKV 216
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BLAST of mRNA_Ecto-sp13_S_contig19176.6123.1 vs. uniprot
Match: A0A6H5J7J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J8_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.410e-10
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:   28 ENHKEAFPLLERALTIRTKKLGENHPDTVGTRNRLEFVREK 68
            E + +A PLLERAL+IR KKLGENHPDTV T+N L+ VR K
Sbjct:    2 EQYTDAVPLLERALSIRMKKLGENHPDTVSTQNSLDVVRRK 42
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BLAST of mRNA_Ecto-sp13_S_contig19176.6123.1 vs. uniprot
Match: D7FGQ2_ECTSI (Tetratricopeptide repeat family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGQ2_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.290e-10
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:   27 QENHKEAFPLLERALTIRTKKLGENHPDTVGTRNRLEFVREKV 69
            QE++ EA PL ERAL+IRT+KLG +HPDT GTRN L+ VR K 
Sbjct:   29 QEHYVEAIPLFERALSIRTRKLGGSHPDTAGTRNGLDVVRRKA 71
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BLAST of mRNA_Ecto-sp13_S_contig19176.6123.1 vs. uniprot
Match: D8LKS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS1_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 2.170e-6
Identity = 26/45 (57.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:   25 IAQENHKEAFPLLERALTIRTKKLGENHPDTVGTRNRLEFVREKV 69
            ++Q  H EA PLLERA +IR KKLGENH  TV T+  LE V++ V
Sbjct:   17 VSQGKHNEALPLLERASSIRGKKLGENHHYTVDTQISLERVQKHV 61
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BLAST of mRNA_Ecto-sp13_S_contig19176.6123.1 vs. uniprot
Match: L9J9D4_TUPCH (Kinesin light chain n=1 Tax=Tupaia chinensis TaxID=246437 RepID=L9J9D4_TUPCH)

HSP 1 Score: 49.3 bits (116), Expect = 4.470e-5
Identity = 30/63 (47.62%), Postives = 37/63 (58.73%), Query Frame = 0 
Query:    2 LEKAVGLDHPDVATVLH---------NRAGALIAQEN-HKEAFPLLERALTIRTKKLGENHPD 54
            LEK  G DHPDVAT+L+         N    L  +   +KEA PL +RAL IR K LG++HPD
Sbjct:  275 LEKTSGHDHPDVATMLNILALVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPD 337
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19176.6123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KN14_9PHAE2.680e-1865.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7J8_9PHAE1.410e-1068.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGQ2_ECTSI2.290e-1065.12Tetratricopeptide repeat family n=1 Tax=Ectocarpus... [more]
D8LKS1_ECTSI2.170e-657.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
L9J9D4_TUPCH4.470e-547.62Kinesin light chain n=1 Tax=Tupaia chinensis TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 12..61
e-value: 1.0E-10
score: 41.8
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 3..62
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..68
e-value: 1.3E-18
score: 69.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..62
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..47
score: 8.654

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19176contigEcto-sp13_S_contig19176:91..660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19176.6123.1mRNA_Ecto-sp13_S_contig19176.6123.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19176 46..708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19176.6123.1 ID=prot_Ecto-sp13_S_contig19176.6123.1|Name=mRNA_Ecto-sp13_S_contig19176.6123.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
MLEKAVGLDHPDVATVLHNRAGALIAQENHKEAFPLLERALTIRTKKLGE
NHPDTVGTRNRLEFVREKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom