prot_Ecto-sp13_S_contig19125.6097.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19125.6097.1
Unique Nameprot_Ecto-sp13_S_contig19125.6097.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: A0A6H5KW94_9PHAE (HELICc2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW94_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 7.940e-79
Identity = 124/128 (96.88%), Postives = 125/128 (97.66%), Query Frame = 0
Query:    4 VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVQRWKHFCNGKAWARITAHKQPMIEPRTAA 131
            VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCV RWKHF NGKAWARI AHK+PMIEPRTAA
Sbjct:    9 VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVHRWKHFSNGKAWARIMAHKEPMIEPRTAA 136          
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: D8LG74_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG74_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 5.260e-47
Identity = 90/121 (74.38%), Postives = 91/121 (75.21%), Query Frame = 0
Query:    4 VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQ------------------------------AWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFST 94
            VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQ                              AWIGTLGRGPTSVTLNSSYANRDND+YKDELGATLANLCRIVPGGVLVFFST
Sbjct:  452 VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQTPLAGLLQAMSPRSSAWWPVGPSETKGKAKAWIGTLGRGPTSVTLNSSYANRDNDNYKDELGATLANLCRIVPGGVLVFFST 572          
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: A0A2K3L1N8_TRIPR (Regulator of telomere elongation helicase 1-like protein (Fragment) n=5 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3L1N8_TRIPR)

HSP 1 Score: 144 bits (363), Expect = 3.110e-40
Identity = 70/128 (54.69%), Postives = 85/128 (66.41%), Query Frame = 0
Query:    4 VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVQRWKHFCNGKA---WARITAHKQPMIEPR 128
            VRSII+TSGTLSPL SF  EL+L F +++ENPHVIGP Q W G +  GP+  T NSSY NRD   YK ELG  + NL RIVP G+LVFF +Y  +   +  WK   N  +   W RI  HK+P+IEPR
Sbjct:   26 VRSIILTSGTLSPLDSFAEELKLDFPIRLENPHVIGPNQIWAGVVPVGPSGRTFNSSYRNRDTMEYKQELGNAIVNLARIVPDGLLVFFPSYYLLEQSIACWKSLSNESSASIWERICNHKKPVIEPR 153          
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: A0A1Y1HMY1_KLENI (Helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HMY1_KLENI)

HSP 1 Score: 152 bits (383), Expect = 4.230e-40
Identity = 70/131 (53.44%), Postives = 91/131 (69.47%), Query Frame = 0
Query:    4 VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVQRWKHFCNGKA---WARITAHKQPMIEPRTAA 131
            VRS++VTSGTL+PL SF +EL+LPF++++ENPHVI P Q W G +  GP+   LNSSY  RD+  YK ELG  + N  RIVP G+LVFF +Y  +  C++ W+    G A   W RIT HKQP++EPR AA
Sbjct:  475 VRSVVVTSGTLAPLESFAHELKLPFQIRLENPHVIQPRQVWAGVVPVGPSGKALNSSYRTRDSPEYKSELGNAIVNFARIVPNGLLVFFPSYHLLTSCLEFWQTPAPGAATTIWERITRHKQPVVEPREAA 605          
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: A0A835YDW4_9CHLO (DNA helicase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YDW4_9CHLO)

HSP 1 Score: 152 bits (383), Expect = 4.280e-40
Identity = 67/133 (50.38%), Postives = 94/133 (70.68%), Query Frame = 0
Query:    3 KVRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVQRWKHFCN----GKAWARITAHKQPMIEPRTAA 131
            +VRS ++TSGT+SP+ +F  EL++PF V++ENPHVIGP Q W+G L  GP+ V LNS++ +RD+ +YKDELG  L N+ R+VP G+LVFF++Y  M+  +  WK        G  W RIT HK P++EPR +A
Sbjct:  520 RVRSFLLTSGTISPMETFAAELQMPFPVRLENPHVIGPSQVWVGVLPTGPSGVALNSTFQSRDSTAYKDELGNALVNVARLVPDGLLVFFASYAAMDSAISHWKQNGGAGGAGSTWERITRHKAPVVEPRESA 652          
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: D8TJ59_VOLCA (DNA helicase (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TJ59_VOLCA)

HSP 1 Score: 149 bits (377), Expect = 1.580e-39
Identity = 66/130 (50.77%), Postives = 91/130 (70.00%), Query Frame = 0
Query:    3 KVRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVQRWKHFCN----GKAWARITAHKQPMIEPR 128
            ++RS ++TSGTLSP+ SF  EL++PF+V++ENPHVI P Q W+G L  GP+   LNS+YA+RD+ +YKDELG  L N+ R+VP G+LVFF++Y  M+  +  WK        G  W RI  HK P++EPR
Sbjct:  406 RLRSFLLTSGTLSPMDSFAGELQIPFQVRLENPHVIEPSQVWVGVLPTGPSGAPLNSTYASRDSATYKDELGNALVNVARLVPDGLLVFFASYAAMDSAINHWKQNGGAGGVGSTWERIVRHKAPVVEPR 535          
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: D8RJV6_SELML (DNA helicase (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RJV6_SELML)

HSP 1 Score: 149 bits (377), Expect = 2.220e-39
Identity = 70/131 (53.44%), Postives = 93/131 (70.99%), Query Frame = 0
Query:    4 VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVQRWK--HFCNGKA-WARITAHKQPMIEPRTAA 131
            VR+I++TSGTLSPL SF  EL+LPF+V++ENPHVIG  Q W+G +  GP+   LNSSY  RD+  YK++LG T+ N  RIVP G+LVFF +Y  +N CV  W+  +  NG   W RI  HKQP++EP+ +A
Sbjct:  428 VRTIVLTSGTLSPLESFAIELKLPFDVRLENPHVIGANQIWVGVVSSGPSGRALNSSYRTRDSPEYKNDLGNTIVNFARIVPDGLLVFFPSYYLLNSCVDSWQTPNQVNGHTLWERICKHKQPVVEPKESA 558          
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: A0A383WD75_TETOB (DNA helicase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WD75_TETOB)

HSP 1 Score: 149 bits (377), Expect = 2.740e-39
Identity = 68/129 (52.71%), Postives = 88/129 (68.22%), Query Frame = 0
Query:    4 VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVQRWKHFCNG----KAWARITAHKQPMIEPR 128
            +RS+++TSGTLSPL SF +EL+L F+  +ENPHVI  +Q W+G +G GPT VTLNSS+ANR++D YKDELG  + N  R+VP G+LVFF  Y  M  C+  WK           W RI  HK P++EPR
Sbjct:  506 LRSVLLTSGTLSPLESFAHELQLGFKYTLENPHVINNDQVWVGVIGSGPTGVTLNSSFANRNSDRYKDELGHAIVNFARVVPDGLLVFFPAYGVMQSCLDHWKASSGPGGGPSIWERILRHKAPVVEPR 634          
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: A0A835SXW5_CHLIN (DNA helicase n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SXW5_CHLIN)

HSP 1 Score: 149 bits (377), Expect = 2.750e-39
Identity = 66/133 (49.62%), Postives = 92/133 (69.17%), Query Frame = 0
Query:    3 KVRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVQRWKHFCN----GKAWARITAHKQPMIEPRTAA 131
            ++RS ++TSGTLSP+ SF  EL++PF V++ENPH+I P Q W+G L  GP+   LNS+YA+RD+ +YKDELG  L N+ R+VP G+LVFF++Y  M+  +  WK        G  W RI  HK P++EPR +A
Sbjct:  544 RLRSFLLTSGTLSPMDSFAGELQIPFPVRLENPHIIAPSQVWVGVLPVGPSGAALNSTYASRDSTAYKDELGNALVNVARVVPDGLLVFFASYAAMDSAIGHWKQNGGAGGVGSTWERIVRHKAPVVEPRESA 676          
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Match: A0A061SHN2_9CHLO (Regulator of telomere elongation helicase 1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SHN2_9CHLO)

HSP 1 Score: 143 bits (360), Expect = 3.570e-39
Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 0
Query:    4 VRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGRGPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMNDCVQRWKH-FCNGKA-WARITAHKQPMIEPRTAA 131
            +RSI++TSGTLSPL SF  EL LPF V++ENPHVI P Q +IG + +GP  ++LNSS+  RD+  YK +LG  + N  R  P G+LVFF +YR +  C+Q WK+ F +G + W RI  HK  +IEPR++A
Sbjct:   46 IRSILLTSGTLSPLDSFAYELCLPFPVRLENPHVIDPRQVYIGVVSKGPAGISLNSSFQKRDSPEYKSDLGNLIVNFARTTPDGLLVFFPSYRVLEGCLQHWKNEFTSGSSIWDRIVQHKWAVIEPRSSA 175          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19125.6097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW94_9PHAE7.940e-7996.88HELICc2 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LG74_ECTSI5.260e-4774.38Helicase ATP-binding domain-containing protein n=1... [more]
A0A2K3L1N8_TRIPR3.110e-4054.69Regulator of telomere elongation helicase 1-like p... [more]
A0A1Y1HMY1_KLENI4.230e-4053.44Helicase n=1 Tax=Klebsormidium nitens TaxID=105231... [more]
A0A835YDW4_9CHLO4.280e-4050.38DNA helicase n=1 Tax=Edaphochlamys debaryana TaxID... [more]
D8TJ59_VOLCA1.580e-3950.77DNA helicase (Fragment) n=1 Tax=Volvox carteri f. ... [more]
D8RJV6_SELML2.220e-3953.44DNA helicase (Fragment) n=4 Tax=Selaginella moelle... [more]
A0A383WD75_TETOB2.740e-3952.71DNA helicase n=1 Tax=Tetradesmus obliquus TaxID=30... [more]
A0A835SXW5_CHLIN2.750e-3949.62DNA helicase n=1 Tax=Chlamydomonas incerta TaxID=5... [more]
A0A061SHN2_9CHLO3.570e-3951.54Regulator of telomere elongation helicase 1 (Fragm... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 53..127
e-value: 2.4E-7
score: 32.2
NoneNo IPR availablePANTHERPTHR11472:SF34REGULATOR OF TELOMERE ELONGATION HELICASE 1coord: 3..129
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 3..129
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 77..111
e-value: 1.9E-6
score: 28.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19125contigEcto-sp13_S_contig19125:825..2357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19125.6097.1mRNA_Ecto-sp13_S_contig19125.6097.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19125 825..2357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19125.6097.1 ID=prot_Ecto-sp13_S_contig19125.6097.1|Name=mRNA_Ecto-sp13_S_contig19125.6097.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
DGKVRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQAWIGTLGR
GPTSVTLNSSYANRDNDSYKDELGATLANLCRIVPGGVLVFFSTYRTMND
CVQRWKHFCNGKAWARITAHKQPMIEPRTAA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C