prot_Ecto-sp13_S_contig19118.6092.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19118.6092.1
Unique Nameprot_Ecto-sp13_S_contig19118.6092.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length380
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19118.6092.1 vs. uniprot
Match: A0A6H5K8Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z3_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 5.870e-123
Identity = 283/310 (91.29%), Postives = 288/310 (92.90%), Query Frame = 0 
Query:   66 SRPLVLAWAGWDRRRSSNSRDDATLRTTALRTADERMAVADDADSQRVLDSSWTHAAFRAFHEMRAGPXXXXXXXXXXXXXXXXXXXXXXGPLAGVRRLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEDGNDAALSTEPRKSPQSEPACWHIRGRLTNTATGQTIALVEGIELARSLAFETASSRKSSRGPKRLAGGXXXXXXXXXXXXXXXXELEVDKVLKPGRWTAFGALATSKFFMYQDPAKGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWGGRSVK 375
            SRPLVLAWAGWDRRRSSNSRD+ATL+TTALRTADER AVAD ADSQRVLDSSWT AAFRAFHEMRAGPXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EDG+DA  STEPRK PQSEPACWH+RGRLTNTATGQTIALVEG+ELARSLAFETASSRKSSRGPKR AGGXXXXXXXXXXXXXXX ELEVDK LKPGRWTAFGALATSKFFMYQDPA GEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWGGRSVK
Sbjct:   68 SRPLVLAWAGWDRRRSSNSRDEATLKTTALRTADERTAVADAADSQRVLDSSWTQAAFRAFHEMRAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGDDAGPSTEPRKRPQSEPACWHMRGRLTNTATGQTIALVEGVELARSLAFETASSRKSSRGPKRPAGGXXXXXXXXXXXXXXXGELEVDKALKPGRWTAFGALATSKFFMYQDPATGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWGGRSVK 377
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BLAST of mRNA_Ecto-sp13_S_contig19118.6092.1 vs. uniprot
Match: D7FYF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF1_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 3.680e-64
Identity = 124/144 (86.11%), Postives = 126/144 (87.50%), Query Frame = 0 
Query:  232 IRGRLTNTATGQTIALVEGIELARSLAFETASSRKSSRGPKRLAGGXXXXXXXXXXXXXXXXELEVDKVLKPGRWTAFGALATSKFFMYQDPAKGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWGGRSVK 375
            +RGRLTNTATGQTIALVEG+ELARSLAFETASSRKSSR P      XXXXXXXX        ELEVDK LKPGRWTAFGALATSKFFMYQDPA GEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEW GRSVK
Sbjct:    1 MRGRLTNTATGQTIALVEGVELARSLAFETASSRKSSRRPXXXX-XXXXXXXXXVAGAEGEGELEVDKALKPGRWTAFGALATSKFFMYQDPATGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWDGRSVK 143
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19118.6092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K8Z3_9PHAE5.870e-12391.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF1_ECTSI3.680e-6486.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..379
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.538

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19118contigEcto-sp13_S_contig19118:387..2752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19118.6092.1mRNA_Ecto-sp13_S_contig19118.6092.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19118 387..2752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19118.6092.1 ID=prot_Ecto-sp13_S_contig19118.6092.1|Name=mRNA_Ecto-sp13_S_contig19118.6092.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=380bp
MAPFVADATAAVVMAAAVLVSSSSTAVAATAGQPAPDRGAAQHHRRRPAS
SFPTAAAAATAAAATSRPLVLAWAGWDRRRSSNSRDDATLRTTALRTADE
RMAVADDADSQRVLDSSWTHAAFRAFHEMRAGPPPSSETNGGEDEGQNEG
GGGATGPLAGVRRLVSRPPKRLETTTTAAATTPKERAAKTSRNSTAGSSS
SPARREKEDGNDAALSTEPRKSPQSEPACWHIRGRLTNTATGQTIALVEG
IELARSLAFETASSRKSSRGPKRLAGGGGNGAGGAVAGAEGEGELEVDKV
LKPGRWTAFGALATSKFFMYQDPAKGEPMDHFRNTPVEKKQAVRTYERFS
QVVSHLLQPNGRVLVVSEWGGRSVKVNRC*
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