mRNA_Ecto-sp13_S_contig1905.6055.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: A0A6H5J6A2_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6A2_9PHAE) HSP 1 Score: 1172 bits (3031), Expect = 0.000e+0 Identity = 595/623 (95.51%), Postives = 606/623 (97.27%), Query Frame = 1
Query: 73 MARPSKDSGARLACRQMGAILKKNALLKMADWRQTLAEVTIPALFMLLLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPLLKCLQKPPGCTAENYYRDEGGFFEEMGLIGLFPTVGYMDSGDGFPWYGFTVGDNSEAFDDFRHVTGVKASNPSQDLDTLASRLRNSGPRTVIAVAPAFEQGQGGMDVFSDDEIPSSRGDVASVNSGEGGGGEANRGYADGGGMGAGAEMLAAEEFSSWLIDELGGDEGELADVVQLFSSEQALIDYVRSADYDRGSDFPSPN-AGRSTAADSSIGVPGYGGMSGGQLSQEVGLRKHPHKVGMAVIFNKAPSEGEVPKWDYTLRLNYTYGVSQLQDQATCLYVGCKLTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMYLNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQ 1938
MARPSKDSGARLACRQMGAILKKNALLKMADWRQT+AEVTIPALFMLLLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPL KCLQKPPGCTAENYYRDEGG+FEEMGLIGLFPTVGY+DSG GFPWYGFTVGDNSEAFDDFRHVTGV ASNPSQDLDTLASRLRNSGPRTVIAVAPAFEQGQGG++VFSD+ IPSSRG VAS+NSGEGGGGEA RG ADGGGM AGAEMLAA+EFSSWLIDELGGDEG+LADVVQLFSSEQALIDYVRSADYDRGSDFPSPN A +S AADSSIGVPGYG MSGGQLSQEVGLRKHPHKVGMAVIFNKAP EGEVPKWDYTLRLNYTYGVSQLQDQATCLYVGCK+TYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMYLNVSM LFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGL D IYHGSWLVTFQVQWVVTNVLIMLVV TSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQ
Sbjct: 1 MARPSKDSGARLACRQMGAILKKNALLKMADWRQTVAEVTIPALFMLLLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPLFKCLQKPPGCTAENYYRDEGGYFEEMGLIGLFPTVGYIDSGVGFPWYGFTVGDNSEAFDDFRHVTGVMASNPSQDLDTLASRLRNSGPRTVIAVAPAFEQGQGGINVFSDERIPSSRGYVASLNSGEGGGGEAKRGSADGGGMRAGAEMLAAKEFSSWLIDELGGDEGDLADVVQLFSSEQALIDYVRSADYDRGSDFPSPNEAEKSNAADSSIGVPGYGAMSGGQLSQEVGLRKHPHKVGMAVIFNKAPLEGEVPKWDYTLRLNYTYGVSQLQDQATCLYVGCKVTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMYLNVSMALFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLSDLIYHGSWLVTFQVQWVVTNVLIMLVVRTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQ 623
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: D7FL55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL55_ECTSI) HSP 1 Score: 1147 bits (2968), Expect = 0.000e+0 Identity = 588/623 (94.38%), Postives = 594/623 (95.35%), Query Frame = 1
Query: 73 MARPSKDSGARLACRQMGAILKKNALLKMADWRQTLAEVTIPALFMLLLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPLLKCLQKPPGCTAENYYRDEGGFFEEMGLIGLFPTVGYMDSGDGFPWYGFTVGDNSEAFDDFRHVTGVKASNPSQDLDTLASRLRNSGPRTVIAVAPAFEQGQGGMDVFSDDEIPSSRGDVASVNSGEGGGGEANRGYADGGGMGAGAEMLAAEEFSSWLIDELGGDEGELADVVQLFSSEQALIDYVRSADYDRGSDFPSPN-AGRSTAADSSIGVPGYGGMSGGQLSQEVGLRKHPHKVGMAVIFNKAPSEGEVPKWDYTLRLNYTYGVSQLQDQATCLYVGCKLTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMYLNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQ 1938
MARPSKDSGARLACRQMGAILKKNALLKMADWRQTLAEVTIPALFMLLLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPL KCLQKPPGCTAENYYRDEGG+FEEMGLIGLFPTVGYMDSGDGFPWYGFTVGDNSEAFDDFRH+TGVKA+NPSQDLDTLASRLRNSGPRTVIAVAPAFEQ QGGMDVFSDD+IPSSRGDVAS+NSGEGGGGEA RG ADGGGMGAGAEMLAAEEFSSWLIDELGGDEGELADVVQLFSSEQALIDYVRSADYDRGSDFPSPN A RS AADSSIGV GYGGMSGGQLSQEVGLRKHPHKVGMA+IFNKAP EGEVPKWDYTLRLNYTYGVSQLQDQ VTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMYLNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPD IYHGSWLVTFQVQWVVTNVLIMLVV TSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQ
Sbjct: 1 MARPSKDSGARLACRQMGAILKKNALLKMADWRQTLAEVTIPALFMLLLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPLFKCLQKPPGCTAENYYRDEGGYFEEMGLIGLFPTVGYMDSGDGFPWYGFTVGDNSEAFDDFRHMTGVKANNPSQDLDTLASRLRNSGPRTVIAVAPAFEQRQGGMDVFSDDKIPSSRGDVASLNSGEGGGGEAKRGSADGGGMGAGAEMLAAEEFSSWLIDELGGDEGELADVVQLFSSEQALIDYVRSADYDRGSDFPSPNEAERSNAADSSIGVTGYGGMSGGQLSQEVGLRKHPHKVGMAIIFNKAPLEGEVPKWDYTLRLNYTYGVSQLQDQ------------------VTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMYLNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDLIYHGSWLVTFQVQWVVTNVLIMLVVRTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQ 605
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: A0A835ZC34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC34_9STRA) HSP 1 Score: 391 bits (1005), Expect = 1.270e-115 Identity = 259/628 (41.24%), Postives = 330/628 (52.55%), Query Frame = 1
Query: 214 LLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPLLKCLQKPPGCTAENYYRDEGGFFEEMGLIGLFPTVGYMDSGDGFPWYGFTVGDNSEAFDDFRHVTGVKASNPSQDLDTLASRLRNSGPRTVIAVAPAFEQGQGGMDVFSDDEIPSSRGDVASVNSGEGGGGEANRGYADGGGMGAGAEMLAAEEFSSWLIDELGGDEGELADVVQLFSSEQALIDYVRSADYDRGSDFP----------SPNAGRSTAADSSI-----------------------GVPGYGGMSGGQLSQEVGLRKHPHKVGMAVIFNKAPSEGEVPK------------------WDYTLRLNYTYGVSQLQDQATCLYVGCKLTYK-LPST-LVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAG--ERMYLNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSG-VKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSN 1929
LLVWIKS+TTV+DSP+ Y CGQ PWQY+ L+P +L CL+KP CT NYY D+ G + ++ + GYM D +P+Y FTV D S +++ +TG + NPS +L T+A RL+ +G IAVA S D P + A A L AE SS L D GD L +V+ F+SE A+ YV A+YD P R+ A S+ G+P WDYTLR N+TY V L +TCLY C + LP T L TS L RPP++ +GY SGFL+ Q+ VDE+++ AAG + + L S FPE+AY TDQFQ++IASTLGI YMLAFLYPVSR VR+LV+EKE R+KE LKMMGL D IY SWL+T VQ ++T+V I+LVV +SVF YS+ LV LWL AV+L++ AFCFL++TFFSR+KTAATLGS++FFA FFPY+YVG A +G T+ A LLAPT LALG DTFAA+EGGLVG+Q N
Sbjct: 3 LLVWIKSVTTVFDSPSVAYVCGQAPPWQYDSHLNP---FGGGILSCLRKPAECTTPNYYTDDWGIGAALNKTDIYTSYGYMPGADRYPFYAFTVEDGSSIYEEAEALTGFQLYNPSLELLTVARRLKFNGQENFIAVA-------------SRDNAPPAA---------------------------AAAARLFAEHLSSRLTD---GD-ARLKGIVRAFASETAIEQYVSDANYDSPGSVKVGFAVVFNEAPPALARAEEAWSAXXXXXXXXXXXXXXXXXXXXXXXXGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDWDYTLRFNFTYAVDLLSRSSTCLYGMCDGGGEGLPGTRLPPTSPLLRPPSAAAAFGYGRSGFLAAQRWVDEWVVGVAAGGGQGVSLKGSFAFFPERAYRTDQFQQVIASTLGIMYMLAFLYPVSRMVRLLVTEKESRIKEGLKMMGLSDAIYQLSWLITMLVQLLITDVAILLVVRSSVFNYSDKALVMLWLFAVSLAITAFCFLIATFFSRAKTAATLGSILFFATFFPYFYVGGAAQAGGAATRALAGLLAPTALALGGDTFAAWEGGLVGIQWGN 583
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: A0A7R9U9E8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9E8_9STRA) HSP 1 Score: 343 bits (880), Expect = 5.060e-106 Identity = 229/634 (36.12%), Postives = 337/634 (53.15%), Query Frame = 1
Query: 94 SGARLACRQMGAILKKNALLKMADWRQTLAEVTIPALFMLLLVWIKSLTTVYDSPATNYTCGQTIPWQYEESLDPATMLQSPLLKCLQKPPGCTAENYYRDEGGFFEEMGLIGLFPTVGYMD-SGDGFPWYGFTVGDNSEAFD-DFRHVTG----VKASNPSQDLDTLASRLRNSGPRTVIAVAPAFEQGQGGMDVFSDDEIPSSRGDVASVNSGEGGGGEANRGYADGGGMGAGAEMLAAEEFSSWLIDELGGDEGELADVVQLFSSEQALIDYVRSADYDRGSDFPSPNAGRSTAADSSIGVPGYGGMSGGQLSQEVGLRKHPHKVGMAVIFNKAPSEGEVPKWDYTLRLNYTYGVSQLQDQAT--CLYVG--------CKLTYKLPSTLVTTSALER--PPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMY-LNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQ 1938
SG R + RQ+ +L K A+ + ++W+ T+AE+ +P LFML+LV +K ++ YDSP +Y+CGQT+ +QY E + + SP KC+Q+PP C A++YYR EG F G + +GY+D + FP Y FTV D S +D D + G ++ NPS + R+ + +AP+ S+D + + + + D + + E + L + ++LF SE+ L +V+ +Y+ + KV +A++FN+A S+ +WDY +R N+T + Q T CLY G C Y +T L+ PP SD+MWGY+ +GFL+LQ VDE+IL A+G Y L S+ L+P + Y TD FQE+I+ LG+FYML+FLYPVSR +R LV EKE ++KE ++MMGL +++ SW F VQ ++ + L++ V +TSVF YS+ L+FLW + +LS++ FCFLMSTFFSRSKTAATLG++VFFAA+FPYY V D + S KT L AP C ++GS AA EG L+GVQ+SN+ Q
Sbjct: 17 SGVRKSARQLKMMLYKTAIQRRSNWQSTVAEILLPVLFMLILVLLKGISEQYDSPPLDYSCGQTL-YQYAEDVTDLSGPDSPA-KCIQRPPTCQADHYYR-EG--FTYQGTE-FYAQLGYVDPAAVSFPLYAFTVADESAVYDFDVSPIVGADEPIQVDNPSLPFRKMLERMH--AVNADLGIAPSNPN--------SEDVV------------------QGTKDFYD---------------YVCAMAKESSTEAENLEESIRLFDSERDLEKFVKGKNYEDET-------------------------------------TRQGKVALAIVFNEANSQEH--QWDYKIRTNFTDPTAGEQSLPTVACLYDGGSPWGTGDCSFKY---NTANPRDVLDEQVPPRSDYMWGYAVTGFLTLQHLVDEYILRLASGNDTYRLQPSISLYPVEDYNTDNFQEVISGLLGLFYMLSFLYPVSRLIRDLVLEKEMKLKEGMRMMGLRSEVFYISWFTVFVVQLILVDALLVAVTTTSVFEYSDTSLIFLWFFSFSLSIIGFCFLMSTFFSRSKTAATLGTIVFFAAYFPYYAVSDPSYS-FSLKTAVCLSAPACFSIGSTVVAAQEGSLIGVQVSNIDQ 558
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: A0A482ST85_9ARCH (ATP-binding cassette domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482ST85_9ARCH) HSP 1 Score: 267 bits (682), Expect = 5.700e-76 Identity = 143/296 (48.31%), Postives = 200/296 (67.57%), Query Frame = 1
Query: 1054 KVGMAVIFNKAPSEGEVPKWDYTLRLNYTYGVSQLQDQATCLYVGCKLTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMYLNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKAL-SGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNMTQ 1938
KV A++ A + +W+Y++R+NYT Q + CLY GC TY +P+T T L +P S++++GY+Y+ + +LQ VD++I+S + + S+GL P Y TD FQ +I+STLGIFYML+FLYPVSR +R LV EKE R+KE +KMMGL D +Y+ SWL+T +Q V +VLI L+ +TSVF YSN LVF++ E+ +L+V+ CFL++TFFSRSK A+ LG ++FFA+FFPYY V D +G KT T LLAP C LG++ FA +EGGLVGVQ N ++
Sbjct: 153 KVAFAIVLINA--DVRAVQWEYSVRVNYTGLFDQDDNTVACLY-GCDFTYSIPTTKFYTMDLFKPQASEYLYGYTYTAYSTLQLMVDKYIMSLYEPDAD-IKASIGLMPTADYKTDNFQYVISSTLGIFYMLSFLYPVSRIIRSLVLEKEMRVKEGMKMMGLTDTVYNSSWLITTVLQMTVVSVLITLITATSVFEYSNKLLVFIYFESFSLAVIMMCFLLATFFSRSKAASLLGPMIFFASFFPYYAVNDPQYDAGAKTAT--CLLAPACFGLGANVFADYEGGLVGVQPDNASE 442
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: A0A4D9D786_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D786_9STRA) HSP 1 Score: 263 bits (671), Expect = 1.420e-71 Identity = 131/294 (44.56%), Postives = 204/294 (69.39%), Query Frame = 1
Query: 1054 KVGMAVIFNKAPSEGEVPKWDYTLRLNYTYGVSQLQDQATCLYVGCKLTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGER-MYLNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNM 1932
KV A++ N+ G P+WDY++R+N+T +Q+ CL+ C Y +P+T + +P +D ++GY+Y+ F +LQK+VD+FIL++A+ + +S+GLFPE A+ +D F +IA++L +F++LAFLYPVSR +R LV EKE ++KE +K+MGL + + SW++T Q VT L+ L+ + + F YSN +L+FL+L +L+++ F FL+STFFS++KTAAT G+++FFA+FFPYY + ++G++TK A LLAPTCL LG+D AAFEGGL+G+Q N+
Sbjct: 235 KVAAAIVVNEVDPRG--PRWDYSVRVNFTQTFETVQETVGCLHAKCAFQYTVPTTQFLVNPFVKPAKADFLFGYTYTAFSTLQKAVDDFILNEASSRGPIETTISLGLFPEPAFHSDDFLTVIAASLALFFVLAFLYPVSRYLRALVLEKETKIKETMKIMGLSSWAANLSWVLTMVAQSTVTVSLMTLLGARTAFSYSNSFLIFLFLLVFSLALVMFVFLVSTFFSKAKTAATAGTVIFFASFFPYYALTGPGVAGIRTKAAACLLAPTCLGLGADVLAAFEGGLMGLQWDNV 526
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: A0A7S1UJX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJX6_9STRA) HSP 1 Score: 249 bits (637), Expect = 5.630e-71 Identity = 150/374 (40.11%), Postives = 213/374 (56.95%), Query Frame = 1
Query: 841 EGELADVVQLFSSEQALIDYVRSADYDRGSDFPSPNAGRSTAADSSIGVPGYGGMSGGQLSQEVGLRKHPHKVGMAVIFNKAPSEGEVPKWDYTLRLNYTYGVSQLQDQAT--CLYVG--------CKLTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAGERMY-LNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSN 1929
+ L D V F E AL +YV+ DYD D + G K+ +A++F++A S +WDY +R NYT + Q Q T CLY G C Y P T + + RPP S H++GY+ +GFL+LQ VD+++L +G + + L S+ LFP AY +D F + I LGIF+MLAFL+PVSR +R LV EKE ++KE + MMGL +++ SW +TF +Q + +V +MLV ++S+F +S L+FLW A +L+++ FCFL++TFFSRSKTAATLGS++FFA FFPYY V D + + +TKT LLAP+C +LGS + E +GVQ N
Sbjct: 169 DANLTDNVLYFEDEHALEEYVKDRDYDDD--------------DYAAG-----------------------KIALAIVFDEANSGTN--QWDYAIRTNYTEASAGEQAQPTVACLYGGGEPWGSEDCPFKYNAPDTTLKLDEV-RPPASAHLFGYAATGFLTLQHLVDQYVLRLVSGNKDFKLQASVSLFPIAAYDSDNFSDAIQDFLGIFFMLAFLFPVSRMIRSLVLEKEMKLKEGMMMMGLRVEVFYASWFITFMIQMTLVDVFLMLVSTSSIFTFSEPGLIFLWYFAFSLAIVCFCFLVATFFSRSKTAATLGSILFFACFFPYYSVEDPSFA-FETKTAVCLLAPSCFSLGSAVVSKLESSQLGVQYDN 501
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: A0A1R3HLR4_COCAP (ABC transporter A, ABCA (Fragment) n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3HLR4_COCAP) HSP 1 Score: 179 bits (453), Expect = 1.110e-45 Identity = 114/322 (35.40%), Postives = 174/322 (54.04%), Query Frame = 1
Query: 1054 KVGMAVIFNKAPSEGEVPKWDYTLRLNYTYGVSQLQDQATCLYVGCKLTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKA-------------------AGERMYLN----------VSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNM 1932
K+ AV+F+ + +DY++RLN+T+ S D +T + L + ++ YSYSGFL+LQ+ +D FI+ A +G L + + FP + Y D+FQ II S +GI Y+L FLYP+SR + V EKE +++E L MMGL D I+H SW +T+ +Q+ +++ +I + ++F+YS+ +VF++ LS + FL+STFFSR+KTA +G+L F AFFPYY V D+A+S + K AS L+PT ALGS FA +E VG++ SN+
Sbjct: 145 KIKGAVVFHHQGPQ----LFDYSIRLNHTWAFSGFPDVSTIMDTNGPYLNDLELGVNIIPTMQ----------YSYSGFLTLQQVLDSFIIFAAQRTETDSATGNIELQTLQSSGTASSLELPWTQFSPSKIRIAPFPTREYTDDEFQSIIKSVMGILYLLGFLYPISRLISYTVFEKEQKIREGLYMMGLKDGIFHLSWFITYAIQFAISSGIITICTMDNLFKYSDKTVVFVYFFVFGLSAIMLSFLISTFFSRAKTAVAVGTLSFLGAFFPYYTVNDEAVS-MLLKVIASFLSPTAFALGSVNFADYERAHVGLRWSNI 451
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: UPI000900D087 (ABC transporter A family member 1 isoform X1 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI000900D087) HSP 1 Score: 186 bits (471), Expect = 1.160e-45 Identity = 118/317 (37.22%), Postives = 174/317 (54.89%), Query Frame = 1
Query: 1054 KVGMAVIFNKAPSEGEVPKWDYTLRLNYTYGVSQLQDQATCLYVGCKLTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFILSKAAG------------------------ERMYLNVSMGLFPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNM 1932
K+ A+IF++ + +DY++RLN+T+ S D +T + L + L+ YS SGF +LQ+ +D FI+ A E N+ + FP + Y D+FQ I+ +GI Y+L FLYP+SR + V EKE ++KE L MMGL D I+H SW +T+ +Q+ V++V+I L T++F+YS+ LVF++ A LS + FL+STFF+R+KTA +G+L F AFFPYY V D+ +S V K AS L+PT ALGS FA +E G VG++ SN+
Sbjct: 160 KIKGAIIFHEQGPQ----VFDYSIRLNHTWAFSGFPDVSTIMDTNGPFLNDLELGVNPVPILQ----------YSLSGFFTLQQVMDSFIIYAAQQIMTNSSFLQWGSSGTDFPVKIPWTEFSPSNIRIAPFPTREYTDDEFQSIVKEVMGILYLLGFLYPISRLISYSVLEKELKIKEGLYMMGLKDEIFHLSWFITYALQFAVSSVIITLCTMTTLFQYSDKSLVFVYFFAFGLSAITMSFLISTFFTRAKTAIAVGTLSFIGAFFPYYTVNDETVSMVL-KVMASFLSPTAFALGSINFADYERGHVGLRWSNI 461
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Match: A0A2P2LAP3_RHIMU (ABC transporter A family member 1 isoform X1 n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LAP3_RHIMU) HSP 1 Score: 179 bits (454), Expect = 3.350e-45 Identity = 113/301 (37.54%), Postives = 166/301 (55.15%), Query Frame = 1
Query: 1111 WDYTLRLNYTYGVSQLQDQATCLYVGCKLTYKLPSTLVTTSALERPPTSDHMWGYSYSGFLSLQKSVDEFIL-------SKAAGERMYLNVSMGL--------------------FPEQAYLTDQFQEIIASTLGIFYMLAFLYPVSRAVRVLVSEKEGRMKEALKMMGLPDFIYHGSWLVTFQVQWVVTNVLIMLVVSTSVFRYSNHWLVFLWLEAVALSVMAFCFLMSTFFSRSKTAATLGSLVFFAAFFPYYYVGDKALSGVKTKTWASLLAPTCLALGSDTFAAFEGGLVGVQLSNM 1932
+DY++RLN+T+ S D T + V L + T ++ YS+SGF +LQ+ VD FI+ +K A E + L S G FP + Y ++FQ II +G+ Y+L FLYP+SR + V EKE +++E L MMGL D I++ SW + + +Q+ +T+ +I S+F+YS+ +VF++ + LS + FL++TFF+R+KTA +G+L F AFFPYY V D A+S V K ASLL+PT ALGS FA +E VGV+ SNM
Sbjct: 161 FDYSIRLNHTWAFSGFPDVKTIMDVNGPFLNDLELGVSTVPIMQ----------YSFSGFFTLQQVVDSFIIFAAQQAETKTATEYIELPDSSGKTSSLNFSWTQFSPSKIRIAPFPTREYTDEEFQSIIKRVMGVLYLLGFLYPISRLISYSVFEKEQKIREGLYMMGLKDGIFYLSWFIAYAIQFAITSGIITACTMNSLFKYSDKSVVFVYFLSFGLSAIMLSFLITTFFTRAKTAVAVGTLSFLGAFFPYYTVNDPAVSMVL-KVIASLLSPTAFALGSVNFADYERAHVGVRWSNM 450 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1905.6055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1905.6055.1 >prot_Ecto-sp13_S_contig1905.6055.1 ID=prot_Ecto-sp13_S_contig1905.6055.1|Name=mRNA_Ecto-sp13_S_contig1905.6055.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=622bp MARPSKDSGARLACRQMGAILKKNALLKMADWRQTLAEVTIPALFMLLLVback to top mRNA from alignment at Ecto-sp13_S_contig1905:3..6057- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1905.6055.1 ID=mRNA_Ecto-sp13_S_contig1905.6055.1|Name=mRNA_Ecto-sp13_S_contig1905.6055.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6055bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1905:3..6057- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1905:3..6057- >mRNA_Ecto-sp13_S_contig1905.6055.1 ID=mRNA_Ecto-sp13_S_contig1905.6055.1|Name=mRNA_Ecto-sp13_S_contig1905.6055.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1866bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1905:3..6057- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |