mRNA_Ecto-sp13_S_contig19.6029.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19.6029.1
Unique NamemRNA_Ecto-sp13_S_contig19.6029.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: A0A6H5K4M4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4M4_9PHAE)

HSP 1 Score: 625 bits (1613), Expect = 1.950e-221
Identity = 332/351 (94.59%), Postives = 338/351 (96.30%), Query Frame = 1
Query:    1 TTTAATGDPKHPGLLMELENTQLDRRALLRTIGGALASLASASALTASPQQAAAAAAGTSVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPPKQGDKALADGTGKETPPPAERTRNPFFGEFFRQLLDPKVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQKISQSSQMETGLDLEALDGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMSLDGKQVTVAVVGLAHVDGIEGILMANGWKSQRC 1053
            TTTAATG+PKHPGLLMELENTQLDRRALLRTIGGALASLASASALTASPQQ  AAAAGT+VGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFM+P KQG+K LADGTGKE  PPAERTRNPFFG FF+QLLDPKV VNDRIT+FFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALR IDLQKISQS QMETGL LEALDGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLM LDGKQVTVAVVGLAHVDGIEGILMANGWK QRC
Sbjct:   49 TTTAATGNPKHPGLLMELENTQLDRRALLRTIGGALASLASASALTASPQQ--AAAAGTAVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMKPSKQGEKTLADGTGKEIAPPAERTRNPFFGAFFKQLLDPKVPVNDRITDFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRKIDLQKISQSGQMETGLGLEALDGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMGLDGKQVTVAVVGLAHVDGIEGILMANGWKCQRC 397          
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: A0A6U5EEF9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EEF9_9STRA)

HSP 1 Score: 178 bits (451), Expect = 5.780e-47
Identity = 132/349 (37.82%), Postives = 184/349 (52.72%), Query Frame = 1
Query:  100 GALASLASASALTASPQQAAAAAAGTSVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPP---KQGDKALAD---------GTGKETPP-----------PAERTRNPFFGEFFRQLLDPKVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQKIS----QSSQMETGLDLEALDGSSV--ESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMSLD------GKQVTVAVVGLAHVDGIEGILMANGWK 1041
            G++AS A+A  L A P QA A  A            +P  LCD A+S L        + LVGTAHIS+ SA LV ++IR ++P+ V VELDA+RVG F+E     KQGD+ LA          G G    P           PA  T         R  L  K++   R  E  AAA+G A+  MY  +D+ G SSG+EF +AI      G+K++LGDRDV++TL RLSEAL  +D  K++      S M  G+   +     +  E ++  ++ LK RE +R ++   K+E PELY A++ ERD+ MA  L  +       G +  VAV+G+AH+DG+E  L + GWK
Sbjct:   62 GSIASGAAAIFLAAPPSQATAVIA------------APPRLCDQAISEL--TLDGVTIRLVGTAHISDESALLVGDIIRTVRPETVFVELDAKRVGRFLEKDGSGKQGDRTLAPTPVEPTSSRGWGVVRDPVSAPQAGTSVAPAPSTEKLGIFSAIRTGLGKKIASLYRAAE--AAAVGSALQSMYSQLDKIGFSSGEEFKMAIETGSEIGSKIVLGDRDVQVTLNRLSEALEIVDWNKLTTMTIDDSIMPKGMGQNSAASGDISKEDLSQVVEALKTRENVRSIMNSLKKELPELYTALVAERDEYMANGLDIIGKNGASRGMKNAVAVMGMAHLDGVERYLQSKGWK 394          
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: W7TUP6_9STRA (Pheromone shutdown, TraB n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUP6_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.270e-46
Identity = 133/381 (34.91%), Postives = 196/381 (51.44%), Query Frame = 1
Query:   58 NTQLDRRALLRTIGGALAS--LASASALTASPQQAAAAAAGTSVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVG--------SFMEPPKQGDK---------ALADGTGKETPP-------PAERTRNP------FFGE-------FFRQLLDPKVSVN----DRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQKISQS---SQMETGLDLEALD---GSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMSLDGKQVTVAVVGLAHVDGIEGILMANGWKSQRC 1053
            N  +DRR +L    G  AS  L +A + + +P   A   A T++     A   P+ LCDDA+S+L NP    +++++GTAHISN+SA LV + IR+++PQ VM+ELDA R+G        S  +P   G           A +     + PP       PA     P      F  +       F R  L     V     +R+    A  +G+ IS +Y  +D+ G  SGQEF +AI+E R  GA LLLGD+DV++TLRRLS+AL   +L K+ +    ++     +LEA     G +   I+ +++ LK R ++R ++   ++E PE+Y AMI ERD  M  +L+   G Q  V VVG+ H+DGIE  L   G+    C
Sbjct:   68 NLDIDRRGVLAAGTGMFASSWLLTAPSTSTTP---AVVHATTTLQPPSQASLKPSGLCDDAISHLRNPKTGQDIYMIGTAHISNASALLVRSTIRELRPQTVMLELDASRIGRLAKNTSNSIPKPSSMGRSEPSRRVVIVASSSSDSPDVPPATFVIPGPASTALQPPPSDPGFLSKQEEGKAGFLRAALGELTRVGSGFRERLVGLGAMVVGQVISGLYRGLDKMGFVSGQEFIVAIDEGRKVGADLLLGDQDVQVTLRRLSDALSRSELGKVREMESPTRSPAARELEARGIRMGDNAADISVAMEALKERSSVRTLMASLQQELPEVYKAMIEERDAYMTASLLGC-GSQTIVGVVGIGHLDGIERNLGREGFVRVPC 444          
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: A0A7S2ECZ5_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ECZ5_TRICV)

HSP 1 Score: 172 bits (435), Expect = 1.980e-44
Identity = 116/311 (37.30%), Postives = 168/311 (54.02%), Query Frame = 1
Query:  220 LCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEP------------------PKQGDKALADGTG--------KETPPPAERTRNPFFGEFFRQLLDPKVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQKISQS-SQMETGL------DLEA---LDGSSV-ESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMSLDGKQVTVAVVGLAHVDGIEGILMANGWK 1041
            LCD +V+   N      V LVGTAHIS  SA L   V+R++KP  V VELD +R+   + P                  P  G +  ADG G        ++   P +R  NPF             +V +R+ E    A+G AI  +Y  +  +G + G+EF +AI+EA    AK++LGDRDV +TLRRL+EAL   DL+K++ S S++E  L      D+++   +D S   + ++  ++ +K RE +R V+   K  APELY AM+ ERD+ MA  L SL      VAV+G+AH+DG+EG LM+ GW+
Sbjct:  122 LCDPSVTTWRNAADGRVVHLVGTAHISEDSAALASRVVREVKPDAVFVELDRKRIARALPPQSVREGGGGEGASSEGGSPTSGGEGFADGPGASSAAAQMEQQQAPPKRV-NPF-------------AVRERLMEAGTRAVGDAIKGVYAKLGSEGFNPGEEFVLAISEAMKINAKVVLGDRDVDVTLRRLTEALARTDLKKLTASDSELERSLKAFVPDDMKSDVSMDRSLTRDQLSRYVETVKARENVRAVMSQLKAAAPELYGAMVAERDEYMARGLQSLGEFGTVVAVMGIAHLDGVEGNLMSYGWE 418          
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: A0A7S2Y0R5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0R5_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.320e-43
Identity = 100/283 (35.34%), Postives = 163/283 (57.60%), Query Frame = 1
Query:  208 SPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPPKQGDKALADGTGKETPPPAERTRNPFFGEFFRQLLDPKVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQKISQSSQMETGLDLEALDGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMSL-DGKQVTVAVVGLAHVDGIEGILMANGWKSQRC 1053
            SPT  C+ AV++L      ++++++GTAHIS++SA LV+ VI+Q+KP  VM+ELD  RV           +  +   G +     +      F E F   +     +++R+  F A  +G  IS +Y+S+D++G SSG+EF +AI EA    A ++LGDR  + TL+RL++A+   DL + S          L +L+ +  +++  +++ILK RE ++ ++    ++ PELY A++ ERD+ MA  L  L D ++   AVVG+AH DGIE  L+ NGW+   C
Sbjct:   62 SPT--CEQAVTHLKK--SGTDMYIIGTAHISSASALLVKEVIQQVKPGYVMLELDPSRVKLAKRNQDANTQFESADAGSK-----KGMNTGLFSEAFS--VTQSTPISERLVSFTAGLVGTVISTLYKSLDKRGFSSGEEFKVAIEEAGKINASVILGDRPAKETLKRLAQAISVSDLSQKSSGDMSSIEAALASLNYADNQALAETVEILKERENVKTMMKLLSDQVPELYKALVTERDEYMAAGLNKLSDAQKPVCAVVGIAHEDGIEQRLINNGWEKVSC 333          
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: A0A7S3Q1T6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1T6_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.710e-43
Identity = 107/316 (33.86%), Postives = 166/316 (52.53%), Query Frame = 1
Query:  220 LCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPPK-----QGDKALADGTGKETP------------------------PPAERT----RNPFFGEFFRQLLDPKVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQKI-SQSSQME---------TGLDLEALDGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMSLDGKQVTVAVVGLAHVDGIEGILMANGW 1038
            LCD +VS   NP+    V+++GTAHIS++SA +   ++R  KP  V VELDA+RVG  +  P       GD +++D  G+  P                        PP+ R      NPF             ++ +++    +  +G +I  +Y  ++ +G S+G+EF +A+ E    G+ ++LGD+DV +TLRRL+EAL   DL+K+ +  S+ME         +G  +E     S E +   ++ +K RE ++ ++   +  APE+YNAM+ ERD+ MA  L  L+     VAVVG+AHVDGIE  LM  GW
Sbjct:  119 LCDPSVSTFRNPSNNRVVYILGTAHISSASADVAGQLVRDTKPSAVFVELDAKRVGRAIPKPSVSGKTSGDISISDTAGEAAPETATPVLVSAPISSPVVNVVEVEVPPSSRPPPTKSNPF-------------NLKEKLLNNASKLVGNSIKGLYSKLESEGFSAGEEFVVAVREGLKIGSTIVLGDQDVEVTLRRLTEALSKTDLKKLLAADSEMEQNMKQLMPDSGKAIETTGEMSSEQLTYFVETIKARENVKLLMSNLQSVAPEIYNAMVKERDEYMANGLDKLNQYDSIVAVVGIAHVDGIERFLMGRGW 421          
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: A0A7S4LCG8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LCG8_9EUGL)

HSP 1 Score: 162 bits (411), Expect = 3.430e-41
Identity = 97/266 (36.47%), Postives = 154/266 (57.89%), Query Frame = 1
Query:  226 DDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPPKQGDKALADGTGKETPPPAERTRNPFFGEFFRQLLDPKVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQKISQSSQMETGLDLE---ALDGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMSLDGKQVTVAVVGLAHVDGIE 1014
            D AVS+L  P  + EV+L+GTAHISN SA LV+NV+R+++P+ VM+ELDA R+           K   DG+G +      R          R L         R+ +  A  +G  ++  Y +++Q G  SGQEF +A+ EA+A  A ++LGD+ + ITL+RL +AL   DL K+         +++E   AL+  S   +  ++++LK R  +R+++   K++ PE+Y A++ ERD  MA +L +  G+++ V VVG+AH+DGIE
Sbjct:  148 DQAVSHLVGPNGR-EVFLIGTAHISNISAELVKNVVREVRPETVMLELDAGRI-----------KMAPDGSGPQEGVVGSRASLSLAERARRDLFTGSKPFGVRLQKLQADLIGGLLAAFYSALNQMGFDSGQEFIVALQEAKALNANIVLGDQPIDITLQRLQQALAVSDLSKMFSPPDSMNEVEIEVAQALNSGSKAELAGAVELLKQRSQVRELVAVMKQQLPEVYQALLAERDSYMANSLRNSPGQRI-VGVVGIAHMDGIE 400          
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: A0A8J6CAP1_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CAP1_DIALT)

HSP 1 Score: 157 bits (397), Expect = 9.660e-40
Identity = 104/282 (36.88%), Postives = 153/282 (54.26%), Query Frame = 1
Query:  223 CDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPPKQGDKALADGTGKETPPPAERTRNPFFGEFFRQLLDPKVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQKI---------SQSSQMETGLDLEALDGSSVE----SINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMSLDGKQVTVAVVGLAHVDGIEGILMA 1029
            CD+A+  L +PT++  ++L GTAH+S  SA LV ++IR ++P  VM+ELD QR  S M  P +  +A  D                     +  L  P  S+ DRI    + A+G+++S++YESM+  G  SG EF +A  EA   GA+L+LGD+DVR TL  L +ALRS DL+ +         SQS + +  L   A  G   E    ++ + +  LK R+  R ++   +E  P LY A+I +RD  MA +L +       VAVVG+AH+DGI   L+A
Sbjct:   75 CDEAIDVLASPTRK--IYLCGTAHVSQDSALLVRSLIRSVRPSSVMIELDEQRFASLMASPAERKRAKGDSD--------------LLRGLWADLRGPG-SLADRIARAQSNAIGRSLSQLYESMEGLGFESGDEFRVAATEALDGGAQLVLGDQDVRTTLDSLRDALRSTDLRALFGAPPVQLDSQSGERQAALYGLASAGGGEEMDKEALGAMIATLKERQNTRAIVLALQESTPALYTALIAQRDAFMARSLDAQCAGSTIVAVVGMAHLDGIGRALLA 339          
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: A0A7S0CDZ2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDZ2_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.530e-39
Identity = 108/286 (37.76%), Postives = 160/286 (55.94%), Query Frame = 1
Query:  220 LCDDAVSYLYNPTKQSE-VWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMEPPKQGDKALADGTGKETPPPAERTRNPFFGEFFRQLLDPKVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDL-QKISQSSQME----TGLDLEALD-----GS-SVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVNLMSLDGKQVT-VAVVGLAHVDGIEGILMANGW 1038
            LCD  VS     TK    V L+GTAHIS+ SA L   V+R+  P  V VELDA+RV     P  + ++ L   +   T   +   ++PF                + I +  AA +GK IS MY+ ++  GL++G+EF++A+NE     A ++LGDRDV +TL+RL+ A+   +  Q +S  SQ+E      L  E +D     GS S + + + ++ILK  + ++ ++   K  APE+Y AM+ ERD+ MA  L  L  K +T VAV+GLAH+DG+E  LMA+GW
Sbjct:  123 LCDSNVSTF---TKNGRTVHLLGTAHISSVSAQLAGRVVRETSPDAVFVELDAKRVDRVFLPESEANQQLV--SNAPTAVQSNTKKSPF-------------GFIETIKKAPAALVGKTISNMYKKLESDGLNAGEEFSVAVNEGLKLNAAIVLGDRDVDVTLQRLTTAISKTNFKQLLSADSQIEEQMINTLPTETIDTFQKIGSLSSDEMRTMVEILKTNDNVKALMANLKRAAPEIYGAMVAERDEYMARGLNELPNKYLTTVAVMGLAHIDGVERNLMASGW 390          
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Match: A0A7S2P6Y4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P6Y4_9STRA)

HSP 1 Score: 155 bits (393), Expect = 8.180e-39
Identity = 107/313 (34.19%), Postives = 163/313 (52.08%), Query Frame = 1
Query:  220 LCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRV-----GSFMEPPKQGDKALA-DGTGKETPP------PAERTRNPFFGEFFRQLLDP---KVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRSIDLQKISQSSQMETGLDLEALDGSSVES-----------------INSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMA-------VNLMSLDGKQVTVAVVGLAHVDGIEGILMANGWK 1041
            LCD AVS      +   + ++GTAHIS++SA L   ++R+IKP VV VELDA+RV     G+     K    A + +G    TP         E T  P          D    K+ +++ +    +  +G A+  MY  ++ +G  +G EF  ++ E  A G+ ++LGDRDV +TL+RL++AL   D++K+  SS  E    +E L    ++S                  NS ++ +K +E ++K++G  KE APE+Y AM+ ERD  MA       +N+ S    + TVAV+G+AHVDG+E  L  NGWK
Sbjct:   73 LCDPAVSTWVKNDRT--IHILGTAHISSASAELAGKMVREIKPNVVFVELDAKRVSRAGIGNSTSTSKTNTVASSNEGAADSTPSVTAAAVETETTLAPKSSVISTPSNDAPPRKIQISNPLVNVGSKYVGNAVKGMYTKLESEGFKAGDEFINSVREGLAIGSTIVLGDRDVEVTLKRLTQALTKTDIRKLL-SSDSEVEKSMEGLLPDQMKSNMNQPSDSVTMGVDDATFNSFVETMKAKENVKKIMGALKETAPEIYQAMVAERDVYMARGLDELGMNVKSGSSVETTVAVMGMAHVDGVENYLATNGWK 382          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19.6029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4M4_9PHAE1.950e-22194.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U5EEF9_9STRA5.780e-4737.82Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
W7TUP6_9STRA3.270e-4634.91Pheromone shutdown, TraB n=2 Tax=Monodopsidaceae T... [more]
A0A7S2ECZ5_TRICV1.980e-4437.30Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S2Y0R5_9STRA2.320e-4335.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3Q1T6_9STRA2.710e-4333.86Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4LCG8_9EUGL3.430e-4136.47Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A8J6CAP1_DIALT9.660e-4036.88Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S0CDZ2_9STRA2.530e-3937.76Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2P6Y4_9STRA8.180e-3934.19Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19contigEcto-sp13_S_contig19:42253..48170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score600.1
Seed ortholog evalue6.3e-169
Seed eggNOG ortholog2880.D7FHB1
Model size1596
KEGG rclassRC00034,RC00767,RC02141,RC02755
KEGG koko:K03781
KEGG ReactionR00009,R00602,R02670
KEGG Pathwayko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.TraB family
EggNOG OGsCOG1916@1,KOG2860@2759
Ec32 ortholog descriptionPheromone shutdown, TraB
Ec32 orthologEc-03_004110.1
EC1.11.1.6
Cds size1011
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19.6029.1prot_Ecto-sp13_S_contig19.6029.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19 42793..48125 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462969.7541533-UTR-Ecto-sp13_S_contig19:42252..427921681462969.7541533-UTR-Ecto-sp13_S_contig19:42252..42792Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19 42253..42792 -
1681462969.8420784-UTR-Ecto-sp13_S_contig19:48125..481701681462969.8420784-UTR-Ecto-sp13_S_contig19:48125..48170Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19 48126..48170 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462969.7660842-CDS-Ecto-sp13_S_contig19:42792..429181681462969.7660842-CDS-Ecto-sp13_S_contig19:42792..42918Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 42793..42918 -
1681462969.7766044-CDS-Ecto-sp13_S_contig19:43671..437671681462969.7766044-CDS-Ecto-sp13_S_contig19:43671..43767Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 43672..43767 -
1681462969.787387-CDS-Ecto-sp13_S_contig19:44218..443561681462969.787387-CDS-Ecto-sp13_S_contig19:44218..44356Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 44219..44356 -
1681462969.7968702-CDS-Ecto-sp13_S_contig19:45062..451601681462969.7968702-CDS-Ecto-sp13_S_contig19:45062..45160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 45063..45160 -
1681462969.8058953-CDS-Ecto-sp13_S_contig19:45745..459321681462969.8058953-CDS-Ecto-sp13_S_contig19:45745..45932Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 45746..45932 -
1681462969.8151085-CDS-Ecto-sp13_S_contig19:46211..463071681462969.8151085-CDS-Ecto-sp13_S_contig19:46211..46307Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 46212..46307 -
1681462969.8235736-CDS-Ecto-sp13_S_contig19:47013..472511681462969.8235736-CDS-Ecto-sp13_S_contig19:47013..47251Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 47014..47251 -
1681462969.8332443-CDS-Ecto-sp13_S_contig19:48093..481251681462969.8332443-CDS-Ecto-sp13_S_contig19:48093..48125Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 48094..48125 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19.6029.1

>prot_Ecto-sp13_S_contig19.6029.1 ID=prot_Ecto-sp13_S_contig19.6029.1|Name=mRNA_Ecto-sp13_S_contig19.6029.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=337bp
MELENTQLDRRALLRTIGGALASLASASALTASPQQAAAAAAGTSVGRRP
GAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIK
PQVVMVELDAQRVGSFMEPPKQGDKALADGTGKETPPPAERTRNPFFGEF
FRQLLDPKVSVNDRITEFFAAALGKAISKMYESMDQKGLSSGQEFTIAIN
EARACGAKLLLGDRDVRITLRRLSEALRSIDLQKISQSSQMETGLDLEAL
DGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKVMAVN
LMSLDGKQVTVAVVGLAHVDGIEGILMANGWKSQRC*
back to top

mRNA from alignment at Ecto-sp13_S_contig19:42253..48170-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19.6029.1 ID=mRNA_Ecto-sp13_S_contig19.6029.1|Name=mRNA_Ecto-sp13_S_contig19.6029.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5918bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19:42253..48170- (Ectocarpus species13 EcNAP12_S_4_19m)
ACCACCACCGCGGCGACAGGAGACCCCAAGCACCCAGGCTTGTTGATGGA GCTGGAAAACACACAACTTGACCGTCGGTATGTCGTAGAGTCTCTTCGTA TTTTGGTGATGTCCTGGGTGCGCTACTTGCTGTACTTCTTGAGTGTACAG CGGATGTACCTTCAAGCATATGCGTTGTCTTACGCATCGAAGTTTTGATA AGCTTGCCCAGCAGTAACGTCCACCGGCCGCAAACATGACTATTGCATAT GCTCGAGGATAATTAGAAACACAGGTAGTTCATATCGCATATTAATACAT CACGAATATATTCTGGACTCTTATCATGGATAAAGGTAAAATTTATCCTG TTCACCACTGATTCCTCCTGATGAGCGGACTGAAGAACAACGGTGGCGTC ATTTAAGGGGTGACGCAAGACAGTCATGAAAGCAGGCAGCAGGACCAACC CACAGCTGGCTGCCAGCTGCCGGTGGTGGCGTTTGCCAAGCTCGAACAGC TGACGCAGCTGACAAGTTGATCTACTCGAACCCCAGCGAAGCCCAACGAA CAAAAAGAAAAAAGTACAAATCTGTTTAGTCAAAAGACAAACAAGATTAC GTGGTACATGCCCTACAGAGATGAAGCAACAATGAAAAACGTCCAGAAAG ATGAACGGAATTATTGCGGAATCCAACGCCTAGTCTACTTTGTCGACGCC GTCGCTGAAACGCTCTCTCTGCGCTCGGGCCCCCTGAACCCTCCTGTCAA CGGTATTTGCCACGCGTATTTTGAGGCATGTATGTACTATTTACAATAAC CGGTGGGTGCCACATAGTTCGTATGCAAGCAACGGGTTGCCGATTTTGAC GAGATGCACACCACCCTTGCCGGATATCCTGGCACGGTGATGGGGCGGCT CAACGTGTTGCGACTGCAGAGCGCTCCTTCGAACGATAGGCGGCGCGCTC GCCTCGTTAGCTTCGGCGTCTGCGCTCACGGCGAGCCCGCAACAGGCGGC GGCGGCGGCGGCGGGTACGTCGGTGGGTAGGCGGCCGGGGGCAAAGCGAT CGCCCACGTTCTTGTGCGACGACGCGGTGTCGTACCTCTACAACCCGACC AAGCAGTCCGAGGTTTGGCTGGTGGGGACGGCTCACATATCAAACTCCAG CGCGACCGTGAGTGAGTTCGAAGCGTACCTCTGGTCGACAGGGGAAAAAA GTTCGTTGGCTACATTAGGATATCGATCGGTCCTGTCCACTCCTTCGGCT GTTATTCTCCGGGCCGCGTCAACGGGCAGGCGGTCCGATGCTTAGCGGTA GGTCAACATCAATGCCGTATTTGCTCACGTTCGTCGAAGCCCCTCTGCTC CTGGGTGGTACATTGGTCTGAGAATGGAATTGCCCGGAGTCCAAGCAAAC CCTGACTTCGGCGTTGTGTGTTAAAACTTGTGCAGCTTTCAAAATCCCTC CTGAACAGGTAAACAACCATCTGGGTCGTGGATACCGTGCTGATGCCCAC CATTCTAGCTCCGCCGCTGGGAAAGGCATGGTACTATTTTCGCAACCTGG ATGGATCCGTGATATGTACTACTTCGGAAGGAACAGAAGCATAGATTCGA CTACTTATCGAGGGACTCTAACTATGTTTTTTGTGTCATGTTCACCCCCT AGCGCTGCCGCAACCTATGCTGAATGACATCGTTGTCGTTCCTTTTTTGT TGACGGAGCTGACCCAAACCGTACAAGGATGGGCGACATACTGCACAAAT CGAATGAGGAGTTGCGCTCGGGCAATTTAAAATTCGAGAACTACGCTCTA AATTGCTTTTGTTCCCCCCTGCTTGTTTCATGTGTGTTTTGCAAATCTCT CGGTCTTGAGCAGCTGGTAGAGAACGTTATCCGACAAATCAAGCCTCAGG TCGTGATGGTCGAGCTCGACGCACAGAGGGTCGGCAGCTTCATGGAGCCG CCAAAGCAGGTGAGACCCACTTCTAGATTACCGTCTCCGTTGTTGTTCGG TGTACGCGTTGGCGCTGCAGCTGAATGAAGTGCTTCATTTTCCTCAAGAG CGAGATAGAGCGGGAATATATAGTCGTATTTCGTTGCGTATCTTGGGTTC GGCAGAAACGCGTAGACAGGGGAATCTTGTCGCTCCATCTTCTTTTTTCC CGCCCCGGTGGTTAAGTCTTGCCCCAAGAAGTGCTTTGTTTTGTACGACC AACCTCTTCATTCTGTTTTGTACGTTCGTCTTTCATAGGGAGATAAGGCT CTGGCTGATGGTACCGGCAAGGAGACACCGCCCCCCGCCGAGAGAACAAG AAATCCCTTTTTCGGCGAGTTCTTTAGGCAGCTGCTCGACCCCAAGGTGT CTGTCAACGACAGAATAACAGAATTTTTCGCCGCGGCGTTGGGGAAGGCC ATCTCCAAGATGTACGAGTCCATGGGTGAGTGATTCGGCCTCCCCCGCCT CGAGAGGAGGCACACAGAAAGGGTAGTCCACAACGCATTTGCCATTGGTT TGAAAATCCAGCAAGTATCTCGTTGTGAAACGTACTCCGGCGTCTGCACG GGTACTGGTCGTAGAAGTGTCGTGCGCTTTGCTGACGCCCGTGCACGGTG TGAGCCGGGATACGGTCACGGTTGTTCGGAAGGTGTAGAGGGTTTGTGGT TTTACTCGAATTGTAGATGTCCCGAGCGCGACCTACGGGCTAATCGACCG TTACACCAGTACGGGTACTGAAATCGATAGAATCTGAAACGCGTGCCAGA TCTTTCTGTTCGCGCCCGACTAAGTAGTTGCATGCAATTGCGGCGTGTTG ACCCATGCGACTCTTTTGGTCCATGGGTGGCCGATTGTACCTGTTGGGAT GAGCAAGGCTTGTGTCACGACGCTGGGGTTGCTGGTGTTCTGCGAACGCT AGGTCGTGGCTATGGTGCACCCGAGCTGCTGCTGCTACTGCTGATGCTGT TGCTGCTGCTTTTCCCGTGACGAATCGTGCTCACCGCTCTTGCCGACCAA ATCGAATCAGACCAAAAGGGGCTGTCGTCTGGACAAGAATTCACCATTGC CATTAACGAAGCCAGAGCCTGCGGCGCGAAGCTCCTTCTTGGGGACAGAG ATGTTCGGGTGTGTATGCGCGTGTGTGCAGTGTACGTGAAGTGACATTAC TCCTGGATCTTCAAGATGGTATGTGCTGCTCGGCTTCGGCTCTTGTGTCG ATTGGTGCTGTCTCTGTGAAAACACCCTTTTTTTTTCGAAACGGCATGTG AGGACGGAGAATCTTGGTTTGGGTCTCTTCACGGTCTGTCCTTTGTCTTG TTGGGGCGGAGGGCCCGGTGAAGTACCGGGCCATGCTGTTCGTCCAACTC CCCGTTCGATCCAATCATCAGACATTTTCTTGAAGTGTGTCACGTATCGT AACTCTGTCATGCGCCCTGAGTCGGCTCTCTTTTTCGTTGCTCAAACAAC GCACTGCGGTTTCAAGTACTCACGCCCTAACTCATCCGATACATGCGGTT TGAGTTGGAGAAAGTCCGTCCTCGGGCGGTTTCGTACGAAGTCTCCGAGA AATAGCACGTAGGAATCGAGCGATTTCATTCGGTTCCGGCCCAGGAATTC GTCACAGCACGCAGGCAGGCATTTCTTTTTTTGCCTGCCCAGGAAACACC CCCTACGGGCGCGAGGCCGCTATGCGGCGTTCGCGACATCTTCCAGCCTG ATCACGGCTCTGGAAGCCCCCGCCGCTGTGGAGCTGATGTCACTTTGTCG GTGTCCCGCCCGTGCCGTTTACCATTGTCAACGTGTGGTTCATCTCGGCG TGTATATACCGCAGATCACTCTTCGCCGACTGTCGGAGGCGCTGAGAAGC ATTGACCTGCAAAAGATCTCACAGTCAAGCCAGATGGAAACGGGGTTAGA CCTCGAGGCGCTCGATGGGTCAAGCGTCGAATCGATCAACTCAAGTCTTG ATGTGAGCTATGTGGGATGCCCCCCTGATGAGCTGGATAAAATCCCGTGT TGTTCGCCGACCGAACACCACGCATTTCCACGCGGCACCTGTTTTCGGGT CGAAGTCGTCGTCTTTTGTTTTTCGTTTTTCTCAACGCGATGGATGGGTA GACACACCGGGTCAGCCCGATTCAACTCCGCACAAACAATAGAGAGTGTG TGCATTGTCTGTGACCTTTGCGCGAATGCCTAGACCAGTTGCCGCCGAAG CACACTTCGCTTGCGTCAGTTTTCTACCCCCAAACGACAGGTCCGTGGGG GCAGGGGACATCCGTGTCTGACCTTCCACTGCCCTGTGGCGATAGACGTA CGTGTTTTGTTTCAAGCGAGCAAGCGCGACGGACAGGGTCAGCCAAACCT AGTCCAATTGATTTTCTCATGGCCCCTCTGTCGCTGTTCGAATCATTGGA CAGATCCTGAAGAACCGCGAGACGATGCGGAAGGTGATCGGCTTCTACAA GGAGGAGGCTCCTGAGCTGTACAACGCCATGATCGGCGAGAGAGATAAGG TGCGCTCTCTCTTTGTGACTTTCGTCGGTCGGTCTATATACCGCCGTTTC TGGTAGAAGAATAGCAAGTGCCCGGACTAAAGCACCCCTTACAAGTTTTG TGCGTCTGGAATAAGTTTCGGAGTTTGTTGTCTCATCTATTACCCTCGCC TGAAGGTGAAACACACCCGACTGGCTTGCCGTTTGTCTTAATGGCTCCGA TCGGGCGGCAAACGGCATCATTCTTCGTCAGTATGTGCCTGCGGTTTAGT GCGGAAAGGACATTGCAGTTCCTGCCCTCGAGCGTACTTGGAGAGGTTGT AGAGGACATGTGGTACGAGATGCGAAAAGTCGCCACGTTTCTGGATCTCG AAGTCGAGAATATGTTTCATAAAGGTTCACGAGCCGGTGACGTGACAAAC TCGGTGCAGTGTTATATCGTTTTCGAGAGACAGGCAAGATGCATGGCACA CGTGCGAATCTGTAGAGTAGGCGATCACAGGTAGATGGGCCGAAAGTGGT TTCCGTGAGTCTATTTGCCTGCGGCTGCACCTGTGAACATTGTCGAGGGT ACACCGGCTGTGCAGGGGTGACGGTAACGGTTCTTGTCTTTGTCCCAAAT TTTTTTTACGTACGGGCTAGACCTAGGCAACAGAACTCGTCGACTTCACC GTTTCGATGCTTGATTCACCGTTGATGTGGTGCACTCGCTCGTGTGTTGC GCGTGAAGACGTAACGAAAGATTGTCGCCAAACGCGCCTCCTTGTCGTGC AGGTGATGGCCGTAAACCTCATGAGCCTCGACGGTAAACAGGTGACCGTT GCTGTCGTGGGACTAGCACACGTGGACGGCATCGAGGGGATCCTAATGGC CAATGGTTGGAAATCTCAGCGATGTTGACGCGACGAAGAGACGGTTGACC CGTGGCTGTTTCAAGCCTTGACTGTTCAACGAGTACAGAGTGGCGTTGTG TTCTGCTGGGAGAGTTGTGCCGTGGCGATGAAAGGTGGCTCGCATGGTCG GGTGGTGGTGTGAAATCTCACACGTGGGCCTTGATGTTTTCATCATTGAG CCAGGGGTCGGCCCCGTTTGAAGGCGTTTAGATGGCATCGTGGAGAATCC AGCGGTTTGGTGAAATTGAGATCATTTGAGAATGCCAAGATCGTTCTCCC GGTTCGACACCTACTCTTAGGACACCTCGTCACTACACGGAGTGTCTCCC ATGGCGTGAGGGTTGCGGATGATACAGCGGACTCGTTGGAAGGGCGCGGC GATTGTGGATAACAGAACATGCCGTGGCGCTGTTCCGTTCTTGGCGTGCC CGTGCTCTGGGCTGACTAACACGAAGCAAGCGGCATCACGAAACAAGACA CTTTTTAAAATCACTTGTACACAGTGGCAACACCTCGCACAGCATTTCTG CCGTATGGGAGCTCCAAT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19:42253..48170-

>mRNA_Ecto-sp13_S_contig19.6029.1 ID=mRNA_Ecto-sp13_S_contig19.6029.1|Name=mRNA_Ecto-sp13_S_contig19.6029.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1011bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19:42253..48170- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGCTGGAAAACACACAACTTGACCGTCGAGCGCTCCTTCGAACGAT
AGGCGGCGCGCTCGCCTCGTTAGCTTCGGCGTCTGCGCTCACGGCGAGCC
CGCAACAGGCGGCGGCGGCGGCGGCGGGTACGTCGGTGGGTAGGCGGCCG
GGGGCAAAGCGATCGCCCACGTTCTTGTGCGACGACGCGGTGTCGTACCT
CTACAACCCGACCAAGCAGTCCGAGGTTTGGCTGGTGGGGACGGCTCACA
TATCAAACTCCAGCGCGACCCTGGTAGAGAACGTTATCCGACAAATCAAG
CCTCAGGTCGTGATGGTCGAGCTCGACGCACAGAGGGTCGGCAGCTTCAT
GGAGCCGCCAAAGCAGGGAGATAAGGCTCTGGCTGATGGTACCGGCAAGG
AGACACCGCCCCCCGCCGAGAGAACAAGAAATCCCTTTTTCGGCGAGTTC
TTTAGGCAGCTGCTCGACCCCAAGGTGTCTGTCAACGACAGAATAACAGA
ATTTTTCGCCGCGGCGTTGGGGAAGGCCATCTCCAAGATGTACGAGTCCA
TGGACCAAAAGGGGCTGTCGTCTGGACAAGAATTCACCATTGCCATTAAC
GAAGCCAGAGCCTGCGGCGCGAAGCTCCTTCTTGGGGACAGAGATGTTCG
GATCACTCTTCGCCGACTGTCGGAGGCGCTGAGAAGCATTGACCTGCAAA
AGATCTCACAGTCAAGCCAGATGGAAACGGGGTTAGACCTCGAGGCGCTC
GATGGGTCAAGCGTCGAATCGATCAACTCAAGTCTTGATATCCTGAAGAA
CCGCGAGACGATGCGGAAGGTGATCGGCTTCTACAAGGAGGAGGCTCCTG
AGCTGTACAACGCCATGATCGGCGAGAGAGATAAGGTGATGGCCGTAAAC
CTCATGAGCCTCGACGGTAAACAGGTGACCGTTGCTGTCGTGGGACTAGC
ACACGTGGACGGCATCGAGGGGATCCTAATGGCCAATGGTTGGAAATCTC
AGCGATGTTGA
back to top