prot_Ecto-sp13_S_contig18921.5988.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18921.5988.1
Unique Nameprot_Ecto-sp13_S_contig18921.5988.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18921.5988.1 vs. uniprot
Match: D7FJN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN7_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 1.900e-63
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0 
Query:    1 VDLYIKSTRDCTAAQGPSCSLDAPCTPCGLDTLQGYIKASGGDANSNNATDGVSRCRSCGAGNSGACSFVLGEGPYCWKEPGSREVEPCSVCCTEPE 97
            V+LYIKSTRDCTAAQGPSCSL APCTPCGLDTL+GYIKASGGDANSNNATDGVSRCRSCGAGNSGAC+FV+GEGPYCWKEPGSREVEPCSVCCTEPE
Sbjct:  139 VNLYIKSTRDCTAAQGPSCSLAAPCTPCGLDTLEGYIKASGGDANSNNATDGVSRCRSCGAGNSGACNFVIGEGPYCWKEPGSREVEPCSVCCTEPE 235
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BLAST of mRNA_Ecto-sp13_S_contig18921.5988.1 vs. uniprot
Match: A0A836CP84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP84_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 9.170e-21
Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 0 
Query:    1 VDLYIKSTRDCTAAQGPSCSLDAPCTPCGLDTLQGYIKASGGDANSNNATDGVSRCRSCGAGNSGACSFVLGEGPYCWKEPGSREVEPCSVCCTEP 96
            ++  + + RDC+A QG  CS  +PC PC    LQ +  A G DA          RCR CG+ N+G C F  GEGPYCW  PGS EV+PC++CC++P
Sbjct:  105 INRLLSAERDCSAGQGRVCSQRSPCLPCEPSKLQQWALA-GLDA---------PRCRRCGSSNAGNCRFREGEGPYCWVRPGSNEVQPCALCCSDP 190
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18921.5988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJN7_ECTSI1.900e-6394.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CP84_9STRA9.170e-2145.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18921contigEcto-sp13_S_contig18921:123..2192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18921.5988.1mRNA_Ecto-sp13_S_contig18921.5988.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18921 123..2192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18921.5988.1 ID=prot_Ecto-sp13_S_contig18921.5988.1|Name=mRNA_Ecto-sp13_S_contig18921.5988.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
VDLYIKSTRDCTAAQGPSCSLDAPCTPCGLDTLQGYIKASGGDANSNNAT
DGVSRCRSCGAGNSGACSFVLGEGPYCWKEPGSREVEPCSVCCTEPEVPI
YT*
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