mRNA_Ecto-sp13_S_contig18908.5979.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: D8LRC1_ECTSI (UMP-CMP kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC1_ECTSI) HSP 1 Score: 278 bits (710), Expect = 6.750e-93 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 1
Query: 1 GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEVAVDVRRHISAIA 441
GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAR KLREVNSDQTIEEVAV+VRRHISAIA
Sbjct: 98 GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEARGKLREVNSDQTIEEVAVEVRRHISAIA 244
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: A0A6H5KTI0_9PHAE (UMP-CMP kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI0_9PHAE) HSP 1 Score: 276 bits (706), Expect = 2.400e-92 Identity = 143/147 (97.28%), Postives = 146/147 (99.32%), Query Frame = 1
Query: 1 GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEVAVDVRRHISAIA 441
GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRL+TYRESTMPIIKEFEAR KLREVNSDQTIEEVA++VRRHISAIA
Sbjct: 94 GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLMTYRESTMPIIKEFEARGKLREVNSDQTIEEVAIEVRRHISAIA 240
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: A0A7S3H2J5_9STRA (UMP-CMP kinase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H2J5_9STRA) HSP 1 Score: 171 bits (432), Expect = 6.920e-51 Identity = 88/145 (60.69%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 1 GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEVAVDVRRHISA 435
GSELA MIN +I+EGKIVPAEVTV LLR A+E SG +FL+DGFPR+ NL W+A+ + A V F LFLDCP E+MT R++ERG++SGR DDNEE++RKRL+TY +ST PII F A K+REVNS++ EEV +V H SA
Sbjct: 83 GSELADMINTYIKEGKIVPAEVTVRLLRNAIESSGNHKFLVDGFPRDLQNLECWKANMSAIADV-QFLLFLDCPHEVMTARLLERGKTSGRADDNEESVRKRLLTYEQSTRPIIDSFRAEGKVREVNSNRPFEEVFAEVSLHFSA 226
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: I2CSD1_NANGC (Flagellar adenylate kinase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSD1_NANGC) HSP 1 Score: 150 bits (380), Expect = 3.240e-44 Identity = 80/134 (59.70%), Postives = 102/134 (76.12%), Query Frame = 1
Query: 19 MINEFIREGKIVPAEVTVGLLRKAMEKSGK-SRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEVAVDV 417
MIN +I+EGKIVPAEVTVGLLR AMEK+G S+FLIDGFPR+P NL WE T + L+L+ PE +M ER++ERG++SGR DDN E+I+KR TY ESTMPII+ F+A+EKL EV +D+ I +V+ DV
Sbjct: 1 MINTYIKEGKIVPAEVTVGLLRAAMEKAGAHSKFLIDGFPRDPGNLRCWE-ETMDDCTLTKAVLYLNAPEAVMLERLLERGKTSGRSDDNAESIKKRFKTYVESTMPIIEHFKAQEKLWEVRADRPIGDVSADV 133
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: C5LAN5_PERM5 (UMP-CMP kinase n=6 Tax=Perkinsus TaxID=28000 RepID=C5LAN5_PERM5) HSP 1 Score: 145 bits (367), Expect = 1.600e-41 Identity = 77/142 (54.23%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 1 GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSG--KSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEVAVDVR 420
GSE +I ++IREG IVP E+TV LL++AME+ +FLIDGFPRN DNL WE GG V F LF DCPE +M +R++ RG++SGR DDN E+IRKR TY TMPII F+A+ K R VN+D+++EEV DV+
Sbjct: 46 GSEYGDLIEKYIREGAIVPVEITVNLLKRAMEQRDWEHGKFLIDGFPRNEDNLDGWER-VLGGKVDEKFCLFFDCPEGVMEKRLLSRGKTSGRSDDNLESIRKRFRTYEADTMPIIVRFKAKGKERRVNADRSVEEVWFDVK 186
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: A0A7S2HN02_9STRA (UMP-CMP kinase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HN02_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.640e-41 Identity = 74/143 (51.75%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 4 SELAGMINEFIREGKIVPAEVTVGLLRKAME----KSGKSRFLIDGFPRNPDNLAAW-EASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEVAVDV 417
SELA +IN I G+IVPA +TV LLR+AME KSG ++FLIDGFPR+ N+ W E T G +V+F LFLDCPE++MT R++ERG++SGR+DDN + IRKR T+R +MPI+ +E + K+R+V +D+T+E++ +V
Sbjct: 106 SELADLINSKIAAGQIVPASITVRLLREAMESIKSKSGNTKFLIDGFPRSDGNVTVWDEVMTDTGLAIVEFVLFLDCPEDVMTSRLLERGQTSGRVDDNLDVIRKRFETFRNESMPIVGRYEKKGKVRKVQADRTVEDIYNEV 248
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: W5MVR9_LEPOC (UMP-CMP kinase n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MVR9_LEPOC) HSP 1 Score: 147 bits (370), Expect = 1.970e-41 Identity = 77/146 (52.74%), Postives = 102/146 (69.86%), Query Frame = 1
Query: 1 GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKS-----GKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEVAVDVRR 423
GSE +I +I+EGKIVP E+T+ LLRKAME++ K RFLIDGFPRN DNL W A+ G A V F LF DC E+ ER +ERG+SSGR DDN E++ KR+ TY +ST PII ++E + K+R V++ ++EEV VDV++
Sbjct: 86 GSEFGQLIESYIKEGKIVPVEITINLLRKAMEETMLKDKEKFRFLIDGFPRNEDNLQGWRAAMDGKANV-KFVLFFDCSNEVCIERCLERGKSSGRTDDNRESLEKRIQTYLQSTKPIIDQYETQGKVRRVDASGSVEEVFVDVQK 230
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: A0A7S3K5R3_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3K5R3_EUPCR) HSP 1 Score: 144 bits (363), Expect = 4.270e-41 Identity = 79/137 (57.66%), Postives = 100/137 (72.99%), Query Frame = 1
Query: 1 GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSG--KSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEV 405
GS+ A +INE+I+EGKIVP E+T LL+KAME +G KSRFLIDGFPR+ DNL W G V V L+L+ E+IMTERI++R +SGR+DDNEEA++KRL TY EST+PIIK FE K EV+S IE++
Sbjct: 31 GSKDAELINEYIKEGKIVPVEITCNLLKKAMEANGWDKSRFLIDGFPRSQDNLDGWN-EVMGDVVNVSTCLYLNTSEDIMTERILKRAETSGRVDDNEEAVKKRLSTYLESTIPIIKHFEELGKTVEVDSTGEIEDI 166
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: H2ZHH9_CIOSA (UMP-CMP kinase n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZHH9_CIOSA) HSP 1 Score: 144 bits (362), Expect = 8.870e-41 Identity = 73/143 (51.05%), Postives = 98/143 (68.53%), Query Frame = 1
Query: 4 SELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEVAVDVRRHIS 432
SE+ +I +I EGKIVP ++T GLL KA+ S ++FLIDGFPRN DNL W + G V V F L+LDCP+EI TERI+ RG++SGR DDN E++ KR TY T+PIIK +EA K+R V ++ + +EV V++H S
Sbjct: 50 SEVGNLIETYITEGKIVPVKITCGLLEKAISSSENNKFLIDGFPRNEDNLTGW-SDQMGDKVEVKFVLYLDCPKEICTERILNRGKTSGRSDDNVESLHKRFETYVNETIPIIKHYEAENKVRHVLTEVSADEVFERVKKHFS 191
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Match: A0A7J7K2I1_BUGNE (UMP-CMP kinase n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7K2I1_BUGNE) HSP 1 Score: 143 bits (360), Expect = 2.380e-40 Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 1 GSELAGMINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEASTAGGAVVVDFALFLDCPEEIMTERIMERGRSSGRIDDNEEAIRKRLVTYRESTMPIIKEFEAREKLREVNSDQTIEEVAVDVRRHISA 435
G +LA MI I G IVP EVT LL KAME SGK FLIDGFPRN +NL W+ + V F LF DCPEE +R +ERG +SGR DDNEE++RKR+VTY +STMPIIK +E++ +R++ +++ I+EV V++ S+
Sbjct: 58 GGKLADMIEHHITNGSIVPVEVTCSLLDKAMEDSGKQDFLIDGFPRNENNLQGWQKAM-DDKTTVKFVLFFDCPEEDCVQRCLERGLTSGRTDDNEESMRKRIVTYTQSTMPIIKYYESQGLVRQIKANRPIDEVFEQVKQAFSS 201 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18908.5979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18908.5979.1 >prot_Ecto-sp13_S_contig18908.5979.1 ID=prot_Ecto-sp13_S_contig18908.5979.1|Name=mRNA_Ecto-sp13_S_contig18908.5979.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=142bp MINEFIREGKIVPAEVTVGLLRKAMEKSGKSRFLIDGFPRNPDNLAAWEAback to top mRNA from alignment at Ecto-sp13_S_contig18908:2..2807+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18908.5979.1 ID=mRNA_Ecto-sp13_S_contig18908.5979.1|Name=mRNA_Ecto-sp13_S_contig18908.5979.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2806bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18908:2..2807+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18908:2..2807+ >mRNA_Ecto-sp13_S_contig18908.5979.1 ID=mRNA_Ecto-sp13_S_contig18908.5979.1|Name=mRNA_Ecto-sp13_S_contig18908.5979.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=426bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18908:2..2807+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |