prot_Ecto-sp13_S_contig1871.5890.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1871.5890.1
Unique Nameprot_Ecto-sp13_S_contig1871.5890.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length981
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1871.5890.1 vs. uniprot
Match: D8LIT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIT2_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 2.700e-9
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 0 
Query:  604 MGEVPIKQSGHVPKRPLGNRLGNRPSTTDGLSPRQQ 639
            MGEVPIKQ G+VPKRPLG RLGNRPSTTDGLSPRQQ
Sbjct:    1 MGEVPIKQFGYVPKRPLGKRLGNRPSTTDGLSPRQQ 36
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1871.5890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIT2_ECTSI2.700e-991.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1871contigEcto-sp13_S_contig1871:8572..15440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1871.5890.1mRNA_Ecto-sp13_S_contig1871.5890.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1871 8572..15440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1871.5890.1 ID=prot_Ecto-sp13_S_contig1871.5890.1|Name=mRNA_Ecto-sp13_S_contig1871.5890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=981bp
LLHLQERSDGGAKPYTETFARRHIERSEAAATAAGAGTGDRDGGGWCLLQ
KYIGPTGTRNSTLRCHWSAVSSHTPARVRRAHPEVVERHRFRLGSVEEIE
MSFRERSPDRSPFRQRLSDQSVPEQLVKETAGLELGAAERLSSSGGVYNG
CLLERSTNVFRADRKDLPCEHRCVTFEEPSPSTRGGLWPRSVREPMKSPA
LRQTVVEACTAALDHISQVTRGEFRPKLATTYFRQGQDGRTYLMFISRWA
GQSPSLGIDANAPLLCQSGTGSATLPIHDSLGLDHQTWLQHVIGMRVEPT
VETTISPNREGSEGGPGALQEYGRPVLHRLVCPGCGRSGIRGGVRCDNNG
SSTMHGDTQVRGRAPSHPVTTQNTGPAMCCPSTNCNDAVANLGDCTDNDK
VAAGEGYSSRAPSLHGLASATFPPLDRTVYTSLGVVVDVCTWSETLRGGH
AARNGDCGSIAINDRSTEVTGRRSIARAGVKRCFRVLNRLHPGVRAQTIS
VRCNEDLRLRLRRVSVCRECALEIAGASDTRLREMNDAAKRKVSEMAARL
GVTSSAPSLSERQRKARVSEDIKAVQRRFAAASSEPIQTRTRLQNCFGGG
PSRMGEVPIKQSGHVPKRPLGNRLGNRPSTTDGLSPRQQVFQHSPRKIVS
ATQPPGGFSLATKYHGEVRMTTSSDGKSVTETFFRSSNEGRVNETITGSV
LRHTSCGRDADDGSGADGGSGADGGGGDGSDEDCVGPDDGFDSFHETLAV
NAWQDERERHIQAQHEHKQQRQRQRQQQQQPEHHCGCKDNTAITGWNFYD
QSNIAFRSRRLLAAYSGTGIGDPGGGGVSPRRAGNARSAKASAAEDGAGV
RDVLAAPPPRALRVALRPSNGRRLSARKMLRRWEATLNIRHWSPVLRDGI
LVTGQVAETVSRKNLGLGARTATEHPAIRAAVYVAAELGLVVDAATARVP
REVGGGVNQRASRGGEPNAGRERLLPGTAR*
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