prot_Ecto-sp13_S_contig1858.5817.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1858.5817.1
Unique Nameprot_Ecto-sp13_S_contig1858.5817.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1783
Homology
BLAST of mRNA_Ecto-sp13_S_contig1858.5817.1 vs. uniprot
Match: D8LMV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMV8_ECTSI)

HSP 1 Score: 2022 bits (5239), Expect = 0.000e+0
Identity = 1242/1593 (77.97%), Postives = 1268/1593 (79.60%), Query Frame = 0
Query:  266 MARVDLKIVADTSPPPIIATSASNLKLGATTSNSPTPGFLRLTCGAPFEVAYRFNYSTAVPTGDWLGVIAWGDEPTAGTCIVRRPFLESSSGTVLFEEGPPLPGKYAVHAFLTESNNAVAGSTAMFECISGFGAEEARCSRNGREFTLYLSTRWDMMVERAAFRDAAAPALKQMLDARGVTFGYIDARSDLDVEDLTTPRGVDAVLDGIRRCCPYFVCCLGELNDVELGAESVNASILQESPWLKRVLLPDSSALTNSSDRETKLVRAGRMRAAAAMLTVTDLEVLSGFLLPVLQETIQAESGSSTTAGVTRARLAAVPGGAARHSCIVNALADFRRLVSQQDREGGDGQDEEDAGDGNGKPVAVDAAQSSGLVAQGTVVPKRGFMTEHAFFYTRAACLRSELHPTQKMGAGGIAGAIRFINGSKGRMIKLKHELAANTSRFRQGYQDETVLVSMLLEDLSRAIDCLYPLHTAPDRLDYASLFPHASARNLLYAAVVKLPVVRYRGFRPEPSAVTGGVLASPGLAAFPAASTXXXXXXXXXXXXXXXXXAWRLQQRLEFIPFEERVKRMSGEAQEGGDTSAXXXXXXXXXDGGTAAGARVDRSLGSDGRQGTARSLGTTPAETGSEDSGDVAAGSGAAPAATPAVAARRLAVVLADYLGDKTTIGMVVVDQPGTGLTTALLGFLEWYCRGQVAGGRKGVTVVESLDRIPQYGRCNLSRAVISRPRLVSRNLNDEGLVDETVERRTLVVRVDCRDPCHGRLDKAHLVNYLSCEMIRTFGMPYKMPDKPGLSSRPDT---------------------------------------------------------------------GIVSEHTSDNPRDHNHDDDEAAVDPQDQLATDTAAVSGTKSGRGTMAVAAATSGGKGGREGGRTEVGPEVLRRWFDVLRGHGDLVLVIENPDALVTPEERAAASPEQAPNPLAWLPPELPPHVKVITTCSTGSSCQQLLCGAEGWGWHMLRRKAGLDADTKCHVIDAVLRKHGVGCMLDWVESDLHNK----NAQFLVGVTEALCYSGKLARSGLPPGLHTAAGTGSRPASPSSVSSAAACRXXXXXXXXXXXXXXXXXXXXXXXXMSDADVARLRGAAASMMHEESAIGVARLRIRQLVSIKGHRGSLLRAALCLVRLSHAGLSALELSAALRHILERYKSQRHQHHKPPAYATFTTSAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-TPAAGQSPVSPSPRATGSPETPPTPGAYADSTKDRNNDSGLPDAPRESVTATDTTAXXXXXXXXXIPEKAGDASMVHASSREVXXXXXXXXXXXXXXXXXXXXX-GGKGAAALGEHGLTSSSPTAERTQRPAFGQQDWRALEPDLMQFCHKVLGRFVLRDFVTVTAVDLECLKTLDKFVVLADSFAKDLPGVRRAEEQLAALGAIVVLSTHGGVEAPRRASRPYREKLFIALADVELLYAMNGSKRGDPQAYLEYMHLAHVFAAPRRFAAAVRSTFEEYYNVVSHKAMGFHGRNYREHYQHQAPAA 1783
            MARVDLKIVA  SPPP  AT+ASNLKLGATTSNSPTPGFLRLTCGAPFEVAYRFNYSTAVPTGDWLGVIAWGDEPTAGTCIVRRPFLESSSGTV FEEGPPLPGKYAVHAFLTESNNAVAGSTAMFECISGFGAEEARCSRNGREFTLYLSTRWDMM+ERAAFRDAAAPALKQMLDARGVTFG+IDARSDLDVEDLTTPRGVDAVLDGIRRCCPYFVCCLGELNDVELGAESVNASILQ +PWLKRVLL DS ALTNSSDRE KLVRAGRMRAAAAMLTVTDLEVLSGFLLPVLQETIQAESGS TTAGVTRARLAAVPGGAARHSCIVNALADFRRLVSQQDREGGDG DEE AGDGNGKPVA DA                              C  + +H   ++                     L H     + R     ++          DLSRAID LYP+HTAPDRLDY SLFPHASARNLL AAVVKLPVVRYRGFRPEPSAVTGGVLASPGLA  PAAST XXXXXXXXXXXXXXXXAWRLQQRLEFIPFEERVKRMSGEAQ GGD S XXXXXXXXX   TAA  RVD SLGSDGR+GTARSLGTTPAETG                 TPAVAA+RLAVVLADYLGDKTTIGMVVVDQPGTGLTTALLGFLEWYCRGQVAGGRKGVTVVESLDRIPQYGRCNLSRAVISRPRLVSRNLND GL DETVERRTLVVRVDCRDPCHGRLDKAHLVNYLSCE+IRTFGMPYKMPDKPGLSSR                                                                        GIVSE TSDNPR+HNHDDDEAAVDPQDQLA DTAA SGTKSG GTMAV       KGG+EGGRTE+GPEVLRRWFDVLRGHGDLVLVIENPDALVTPEERAAASPEQ PNPLAWLPPELPPHVKVITTCSTGSSCQQLLCGAEGWGWHMLRRKAGLDADTK  VIDAVLRKHGVGCMLDWVESDL  K    N QFLVGVTEALCYSGKLARSGLPPGLHTAA  GSRPASPSSVSSAAACR                 XXXXXXX+SDADVA LRGAAASMMHEESAIGVARLRIRQLVSIKGHRGSLLRAALCLVRLSHAGLS LELSAALRHILERYKSQRHQHHKPP Y   T SAAG+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           V TP   QSP S SP+ATGSPETPP PGA AD+TKDRNNDSGLPDAPR+SVT      XXXXXXXXX                  XXXXXXXXXXXXXXXXXXXXX GGKGAAALGEHGLTSSSP AERTQRPAFGQQDWRALEPDLMQFCHKVLGRFVLRDFVTVTAVDLECL+T DKFVVLADSFAKDLPGVRRAEEQLAAL AIVVLSTHGGVEAPRRASRP+REKLF ALADVELLYAMNGSK                            STFEEYYNVVSHKAMGFHGRN+REHYQHQA AA
Sbjct:    1 MARVDLKIVAGVSPPPTTATTASNLKLGATTSNSPTPGFLRLTCGAPFEVAYRFNYSTAVPTGDWLGVIAWGDEPTAGTCIVRRPFLESSSGTVFFEEGPPLPGKYAVHAFLTESNNAVAGSTAMFECISGFGAEEARCSRNGREFTLYLSTRWDMMLERAAFRDAAAPALKQMLDARGVTFGFIDARSDLDVEDLTTPRGVDAVLDGIRRCCPYFVCCLGELNDVELGAESVNASILQGNPWLKRVLLSDSPALTNSSDREKKLVRAGRMRAAAAMLTVTDLEVLSGFLLPVLQETIQAESGSCTTAGVTRARLAAVPGGAARHSCIVNALADFRRLVSQQDREGGDGHDEEVAGDGNGKPVAADAGHG---------------------------CSEARIHDGTRL---------------------LLHSCRVPSQRAPPYPKN----------DLSRAIDRLYPMHTAPDRLDYVSLFPHASARNLLNAAVVKLPVVRYRGFRPEPSAVTGGVLASPGLAVSPAASTAXXXXXXXXXXXXXXXXAWRLQQRLEFIPFEERVKRMSGEAQGGGDISXXXXXXXXXXXXXTAAAVRVDLSLGSDGRRGTARSLGTTPAETGXXXXXXXXXXXXXXXXXTPAVAAKRLAVVLADYLGDKTTIGMVVVDQPGTGLTTALLGFLEWYCRGQVAGGRKGVTVVESLDRIPQYGRCNLSRAVISRPRLVSRNLNDGGLADETVERRTLVVRVDCRDPCHGRLDKAHLVNYLSCEIIRTFGMPYKMPDKPGLSSRYRIYNCRLDMFIFNLYGTYQWRRGDATNVGTLELRCRALWVERAAVRERTHWKELKPLALGNGGHHEGKKVHGIVSEQTSDNPREHNHDDDEAAVDPQDQLAADTAAPSGTKSGGGTMAVXXXXXXXKGGKEGGRTEIGPEVLRRWFDVLRGHGDLVLVIENPDALVTPEERAAASPEQVPNPLAWLPPELPPHVKVITTCSTGSSCQQLLCGAEGWGWHMLRRKAGLDADTKGQVIDAVLRKHGVGCMLDWVESDLVLKEKTANIQFLVGVTEALCYSGKLARSGLPPGLHTAASAGSRPASPSSVSSAAACRSNSGSCTSAGKGENCDGXXXXXXXLSDADVASLRGAAASMMHEESAIGVARLRIRQLVSIKGHRGSLLRAALCLVRLSHAGLSVLELSAALRHILERYKSQRHQHHKPPPYTNVTASAAGSGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAREPPAREAAVATPTTRQSPASTSPQATGSPETPPNPGASADTTKDRNNDSGLPDAPRKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGKGAAALGEHGLTSSSPRAERTQRPAFGQQDWRALEPDLMQFCHKVLGRFVLRDFVTVTAVDLECLETRDKFVVLADSFAKDLPGVRRAEEQLAALAAIVVLSTHGGVEAPRRASRPHREKLFTALADVELLYAMNGSK----------------------------STFEEYYNVVSHKAMGFHGRNHREHYQHQARAA 1507          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1858.5817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMV8_ECTSI0.000e+077.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 27..911
NoneNo IPR availablePANTHERPTHR23202:SF27VERPROLIN 1, ISOFORM Gcoord: 27..911

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1858contigEcto-sp13_S_contig1858:2..15197 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1858.5817.1mRNA_Ecto-sp13_S_contig1858.5817.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1858 2..15197 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1858.5817.1 ID=prot_Ecto-sp13_S_contig1858.5817.1|Name=mRNA_Ecto-sp13_S_contig1858.5817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1783bp
YHHRDKLHYPHPAKDWVGLFLLGDELPPTPAAIASGVRPPPQAGQRQTTP
VTPDKRSPYHVTPAFGEHSIARGSTPDGQLTTGRSNVGSTAENTKDGSAS
VVSGDGSAVDAAAAAAAAAAASTAGSAGLALTVKLAASVASGINPPGRHA
DFSTPDNVNGEHASSRTQNKKMSSSHQVATELATGASPRATATRSGNNSV
VGKERDTGKTLFPGKMIGWRTLPPDDAGAFEVDEGIVALEGVYVVRYFLG
GSGCCVAQSKNFKIEMARVDLKIVADTSPPPIIATSASNLKLGATTSNSP
TPGFLRLTCGAPFEVAYRFNYSTAVPTGDWLGVIAWGDEPTAGTCIVRRP
FLESSSGTVLFEEGPPLPGKYAVHAFLTESNNAVAGSTAMFECISGFGAE
EARCSRNGREFTLYLSTRWDMMVERAAFRDAAAPALKQMLDARGVTFGYI
DARSDLDVEDLTTPRGVDAVLDGIRRCCPYFVCCLGELNDVELGAESVNA
SILQESPWLKRVLLPDSSALTNSSDRETKLVRAGRMRAAAAMLTVTDLEV
LSGFLLPVLQETIQAESGSSTTAGVTRARLAAVPGGAARHSCIVNALADF
RRLVSQQDREGGDGQDEEDAGDGNGKPVAVDAAQSSGLVAQGTVVPKRGF
MTEHAFFYTRAACLRSELHPTQKMGAGGIAGAIRFINGSKGRMIKLKHEL
AANTSRFRQGYQDETVLVSMLLEDLSRAIDCLYPLHTAPDRLDYASLFPH
ASARNLLYAAVVKLPVVRYRGFRPEPSAVTGGVLASPGLAAFPAASTAAT
AATAAAAAAAAASAAWRLQQRLEFIPFEERVKRMSGEAQEGGDTSAAAAA
HAAAADGGTAAGARVDRSLGSDGRQGTARSLGTTPAETGSEDSGDVAAGS
GAAPAATPAVAARRLAVVLADYLGDKTTIGMVVVDQPGTGLTTALLGFLE
WYCRGQVAGGRKGVTVVESLDRIPQYGRCNLSRAVISRPRLVSRNLNDEG
LVDETVERRTLVVRVDCRDPCHGRLDKAHLVNYLSCEMIRTFGMPYKMPD
KPGLSSRPDTGIVSEHTSDNPRDHNHDDDEAAVDPQDQLATDTAAVSGTK
SGRGTMAVAAATSGGKGGREGGRTEVGPEVLRRWFDVLRGHGDLVLVIEN
PDALVTPEERAAASPEQAPNPLAWLPPELPPHVKVITTCSTGSSCQQLLC
GAEGWGWHMLRRKAGLDADTKCHVIDAVLRKHGVGCMLDWVESDLHNKNA
QFLVGVTEALCYSGKLARSGLPPGLHTAAGTGSRPASPSSVSSAAACRSN
SGSCTSTGRGENCDGGGGGGGGMSDADVARLRGAAASMMHEESAIGVARL
RIRQLVSIKGHRGSLLRAALCLVRLSHAGLSALELSAALRHILERYKSQR
HQHHKPPAYATFTTSAAGASAGGRNTGGGNKEPGNSSDVHDNTSNNANNN
PSNNNTSSSRTTATASAREAPARETAAVTPAAGQSPVSPSPRATGSPETP
PTPGAYADSTKDRNNDSGLPDAPRESVTATDTTATTTTKRNTTIPEKAGD
ASMVHASSREVGGGGNTGAAAATAAAKQPPERGGKGAAALGEHGLTSSSP
TAERTQRPAFGQQDWRALEPDLMQFCHKVLGRFVLRDFVTVTAVDLECLK
TLDKFVVLADSFAKDLPGVRRAEEQLAALGAIVVLSTHGGVEAPRRASRP
YREKLFIALADVELLYAMNGSKRGDPQAYLEYMHLAHVFAAPRRFAAAVR
STFEEYYNVVSHKAMGFHGRNYREHYQHQAPAA
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