prot_Ecto-sp13_S_contig1857.5812.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1857.5812.1
Unique Name	prot_Ecto-sp13_S_contig1857.5812.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	594

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1857.5812.1 vs. uniprot
Match: A0A6H5JLJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLJ8_9PHAE)

HSP 1 Score: 679 bits (1752), Expect = 3.670e-238
Identity = 451/529 (85.26%), Postives = 461/529 (87.15%), Query Frame = 0

Query:    1 MDSFTSPSAPDGTSGSQYSSTRSSLPAASSGAAEGQQPEGEAPGASRQAATPRQQPQGSSMYDLFLTAVGLTPRGLGAETFSPGGSGVGAEEEEFWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGGA---NFYSASALAGVRGRDTIF------------------NSVAGSNRSAPAVSAQRPSLRAEIARAHPGEASDGQDGSVDTAADAMCTATGAEGTARRRRRLLGSNAAVGPESADSRASRSRTFSATTPRLFRRGNPMFRSGDTGSFWRSNFFAGNATFDDESDVEEDAASTATRAVERAVNGTSAVTAAATGGHAAAAMADVERNGRVAGGNNLDSTERGEGGDGGGQGRILFYHKPTLANVPAGDIPDVVPVYLGCPRGNMALGLPLDEAWQGEEHQDTTFNQNLSYTILSWPEDHVQDLLELWRLQVLFFTTIIFNILVSALLFFTENPDRSRVEGFARPGAFPRPFEQRSPIDDPTGLRSEA 508
            MDSFTSPSAPDGTSG QYSSTRSSLPAASSGAAEGQQPEGEAPGAS QAATPRQQPQGSSMYDLFLTA+GLTP GLGAETFSPGGSGV AEEE     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VPIGGA   ++ S SA+AGVRGR T F                  NSVAGSNRSAPA  AQRPS  AEIAR HPGEASDGQD SVDTAADAMCTATGAEGTARRRRRLLGSNAAVGPES D+RASRSRTFSATTPRLFRRGNP+FRSGD GSFWRSN FAGNATFDDE+DVEEDAA T TRAVERAVN                 +ADVERN RVAG N+LDSTERGEGGDGGGQGRILFYHKPTLANVPAGDIPDVVPVYLGCPRGNMALGLPLDEAWQGEEHQDTTFNQNLSYTILSWPEDHVQDLLELWRLQVLFF TIIFNILVSALLFFTENPDR+RVEGFAR GAFPRPFEQRSP DDPTGLRSEA
Sbjct:    1 MDSFTSPSAPDGTSGGQYSSTRSSLPAASSGAAEGQQPEGEAPGASGQAATPRQQPQGSSMYDLFLTAIGLTPPGLGAETFSPGGSGVEAEEEXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVPIGGACANSYSSVSAVAGVRGRGTTFTXXXXXXXXXXXXXXXXXNSVAGSNRSAPAAGAQRPSAGAEIARTHPGEASDGQDASVDTAADAMCTATGAEGTARRRRRLLGSNAAVGPES-DARASRSRTFSATTPRLFRRGNPLFRSGDIGSFWRSNVFAGNATFDDENDVEEDAAGTGTRAVERAVNXXXXXXXXXXXXXXXXXVADVERNDRVAGCNSLDSTERGEGGDGGGQGRILFYHKPTLANVPAGDIPDVVPVYLGCPRGNMALGLPLDEAWQGEEHQDTTFNQNLSYTILSWPEDHVQDLLELWRLQVLFFATIIFNILVSALLFFTENPDRTRVEGFARSGAFPRPFEQRSPTDDPTGLRSEA 525

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BLAST of mRNA_Ecto-sp13_S_contig1857.5812.1 vs. uniprot
Match: D8LBY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY6_ECTSI)

HSP 1 Score: 659 bits (1699), Expect = 5.370e-232
Identity = 415/465 (89.25%), Postives = 426/465 (91.61%), Query Frame = 0

Query:   61 MYDLFLTAVGLTPRGLGAETFSPGGSGVGAEEEEFWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGGANFYSASALAGVRGRDTIF-----------------NSVAGSNRSAPAVSAQRPSLRAEIARAHPGEASDGQDGSVDTAADAMCTATGAEGTARRRRRLLGSNAAVGPESADSRASRSRTFSATTPRLFRRGNPMFRSGDTGSFWRSNFFAGNATFDDESDVEEDAASTATRAVERAVNGTSAVTAAATGGHAAAAMADVERNGRVAGGNNLDSTERGEGGDGGGQGRILFYHKPTLANVPAGDIPDVVPVYLGCPRGNMALGLPLDEAWQGEEHQDTTFNQNLSYTILSWPEDHVQDLLELWRLQVLFFTTIIFNILVSALLFFTENPDRSRVEGFARPGAFPRPFEQRSPIDDPTGLRSEA 508
            MYDLFLTAVGLTPRGLGAETFSPGGSGV AEEEEFWS  XXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXX  VPIGGAN YSASA+AGVRGRDT+F                 NS+AGSNRSAPA  AQRPS  AEIAR HPGEASDGQD SVDT ADAMCTATGAEGTARRRRRLLGSNAAVGPESADSRASRSRTFSATTPRLFRRGNP+FRSGD GSFWRSN FAGNATFDDE+DVEEDAA TATRAVERA+NGTSAVTAAATGGHAAAA+A +E NGRVAGGN+LDSTERGEGGDGGGQGRILFYHKPTLANVPAGDIPDVVPVYLGCPRGNMALGLPLDEAW GEEHQDTTFNQNLSYTILSWPEDHVQDLLELWRLQVLFFTTIIFNILVSALLFFTENPDR+RVEGFARPGAFPRPFE+RSPIDDPTGLRSEA
Sbjct:    1 MYDLFLTAVGLTPRGLGAETFSPGGSGVEAEEEEFWSATXXXXXXXXXXXXXXXXXXXXXXXXXIPRXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VPIGGANSYSASAVAGVRGRDTMFTXXXXXXXXXXXXXXXXNSLAGSNRSAPAAGAQRPSAGAEIARTHPGEASDGQDASVDTVADAMCTATGAEGTARRRRRLLGSNAAVGPESADSRASRSRTFSATTPRLFRRGNPLFRSGDIGSFWRSNVFAGNATFDDENDVEEDAAGTATRAVERAINGTSAVTAAATGGHAAAAVAGMEGNGRVAGGNSLDSTERGEGGDGGGQGRILFYHKPTLANVPAGDIPDVVPVYLGCPRGNMALGLPLDEAWPGEEHQDTTFNQNLSYTILSWPEDHVQDLLELWRLQVLFFTTIIFNILVSALLFFTENPDRTRVEGFARPGAFPRPFEKRSPIDDPTGLRSEA 463

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1857.5812.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1857.5812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JLJ8_9PHAE	3.670e-238	85.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LBY6_ECTSI	5.370e-232	89.25	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 533..550
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 452..470
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 527..532
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 551..593
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..451
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 471..507
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 508..526
None	No IPR available	TMHMM	TMhelix		coord: 508..527
None	No IPR available	TMHMM	TMhelix		coord: 448..470
None	No IPR available	TMHMM	TMhelix		coord: 531..550

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1857	contig	Ecto-sp13_S_contig1857:3739..7136 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1857.5812.1	mRNA_Ecto-sp13_S_contig1857.5812.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1857 3467..7542 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1857.5812.1 ID=prot_Ecto-sp13_S_contig1857.5812.1|Name=mRNA_Ecto-sp13_S_contig1857.5812.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=594bp
MDSFTSPSAPDGTSGSQYSSTRSSLPAASSGAAEGQQPEGEAPGASRQAA
TPRQQPQGSSMYDLFLTAVGLTPRGLGAETFSPGGSGVGAEEEEFWSATN
EEEKVGGVPRGSGGVVDESSRGGRTPRREEQQQPAAAAGAGAGAESGDTN
NNNNNNNVPIGGANFYSASALAGVRGRDTIFNSVAGSNRSAPAVSAQRPS
LRAEIARAHPGEASDGQDGSVDTAADAMCTATGAEGTARRRRRLLGSNAA
VGPESADSRASRSRTFSATTPRLFRRGNPMFRSGDTGSFWRSNFFAGNAT
FDDESDVEEDAASTATRAVERAVNGTSAVTAAATGGHAAAAMADVERNGR
VAGGNNLDSTERGEGGDGGGQGRILFYHKPTLANVPAGDIPDVVPVYLGC
PRGNMALGLPLDEAWQGEEHQDTTFNQNLSYTILSWPEDHVQDLLELWRL
QVLFFTTIIFNILVSALLFFTENPDRSRVEGFARPGAFPRPFEQRSPIDD
PTGLRSEAWHLAAALLLSLLGIVCVLARLRAGIALYLVLTVVNAVVGLSH
SPDPLFACRYAIDVLLVAMGRSYLSSLSYTWVTASAGAGRWGW*