mRNA_Ecto-sp13_S_contig18522.5783.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: D8LRC6_ECTSI (Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC6_ECTSI) HSP 1 Score: 234 bits (598), Expect = 5.270e-73 Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 1
Query: 7 AAPVVKRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKTGGNQVERILSRTVGGRVTLDLDVKKMVESNPKRRSVMVNNGTPMLFTIMRDRLMQILA 393
AAPVVKRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVK GGNQVERILSRTVGGRVTLDLDVKKMV+SNPKRRSVMV+NGTPMLFTIMRDRLMQILA
Sbjct: 66 AAPVVKRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKAGGNQVERILSRTVGGRVTLDLDVKKMVQSNPKRRSVMVDNGTPMLFTIMRDRLMQILA 194
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: A0A6H5JBN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN7_9PHAE) HSP 1 Score: 210 bits (535), Expect = 3.340e-67 Identity = 110/118 (93.22%), Postives = 117/118 (99.15%), Query Frame = 1
Query: 1 MAAAPVVKRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKTGGNQVERILSRTVGGRVTLDLDVKKMVESNPKRRSVMVNNGTPML 354
MAAAPVVKRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDA+K GGNQVERILSRTVGGRVTLDLDVKK+++S+PKRRSVMV+NGTPM+
Sbjct: 64 MAAAPVVKRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAIKAGGNQVERILSRTVGGRVTLDLDVKKLIQSDPKRRSVMVDNGTPMV 181
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: A0A7S2B7W2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B7W2_9EUKA) HSP 1 Score: 123 bits (309), Expect = 1.560e-32 Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = 1
Query: 10 APVVKRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKTGGNQVERILSRTVGGRVTLDLDVKKMVESNPKRRSVMVNNGTPMLFTIMRDRLMQILA 393
AP ++RVA+VGAG+GGL LA AL T T V+EV VFE+ D +KP IGGG+QIN GA +LARLGLG+ +K V RILSR GG LD+DV+ +V P +++ ++GTP F+IMRD L ++LA
Sbjct: 40 APPLRRVAVVGAGIGGLALARALYTLDTGVEEVVVFERRDEIKPNIGGGIQINGGAAVLARLGLGEQMKASALPVRRILSRKSGGFELLDIDVESLVLGEP---TLVDDSGTPQAFSIMRDALQRMLA 164
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: R1CJR6_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CJR6_EMIHU) HSP 1 Score: 121 bits (303), Expect = 6.290e-30 Identity = 66/124 (53.23%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 22 KRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKTGGNQVERILSRTVGGRVTLDLDVKKMVESNPKRRSVMVNNGTPMLFTIMRDRLMQILA 393
+RVA+VGAG+GGL LA AL T T V+EV VF++ +KPG+GGG+QIN GA +LARLGLG+ +K V RILSR GG LD+DV+ +V + P +++ +GTP F+IMRD L +ILA
Sbjct: 29 RRVAVVGAGIGGLALARALQTLDTGVEEVAVFDRRSELKPGVGGGIQINGGAAVLARLGLGEQMKASALPVRRILSRKSGGFELLDIDVESLVSAEP---ALVAPDGTPQAFSIMRDALQRILA 149
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: A0A0M0K4R9_9EUKA (FAD_binding_3 domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K4R9_9EUKA) HSP 1 Score: 113 bits (282), Expect = 1.620e-27 Identity = 63/123 (51.22%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 22 KRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKTGGNQVERILSRTVGGRVTLDLDVKKMVESNPKRRSVMVNNGTPMLFTIMRDRLMQIL 390
+RVA+VGAG+GGL LA AL T V+E+ VF++ +KPG GGG+QIN GA +LARLGLG+ VK V RILSR GG LD+DV +V + P +++ +GTP F+IMRD L ++L
Sbjct: 7 RRVAVVGAGIGGLALARALGELDTGVEEIVVFDRRAELKPGTGGGIQINGGAAVLARLGLGEQVKRAALPVRRILSRKSGGFELLDIDVASLVSAEP---ALVAADGTPQAFSIMRDALQRML 126
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: A0A836CJN1_9STRA (Monooxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN1_9STRA) HSP 1 Score: 104 bits (260), Expect = 6.930e-24 Identity = 63/124 (50.81%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 22 KRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEK-FDSVKPGIGGGVQINSGAVILARLGLGDAVKTGGNQVERILSRTVGGRVTLDLDVKKMVESNPKRRSVMVNNGTPMLFTIMRDRLMQIL 390
+R+AIVGAG GGLTLANAL T VDEV+VFE+ +++PG GGG+QINSGA IL LG GD + ++ R+L+R GRV LDLDV + E +R S + IMRDRL Q+L
Sbjct: 29 RRIAIVGAGAGGLTLANALRKLDTGVDEVEVFERSVSNLQPGTGGGIQINSGASILRLLGFGDELDASAQRITRVLTRAASGRVLLDLDVLEAAER--RRNSGQFAASDLKFYAIMRDRLQQML 150
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: A0A7S2RL63_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL63_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.050e-18 Identity = 56/135 (41.48%), Postives = 84/135 (62.22%), Query Frame = 1
Query: 25 RVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKTGGNQVERILSR----TVGG------RVTLDLDVKKMVES--NPKRRSVMVNNGTPMLFTIMRDRLMQILA 393
RV ++G G+GGL+LANAL +A D V VF+K ++PG+GGGVQ+ GA +LARLG G+ + G+ + R+L+R VGG + LDLDV+ + + + ++ + G M FTIMRD L+++LA
Sbjct: 9 RVGVIGGGIGGLSLANALIQQDSAFD-VTVFDKAAVLRPGLGGGVQLTGGAAVLARLGFGEELVAAGHPLRRVLTRKVPPAVGGAGAVEPKQLLDLDVRSALADLEDARETGLLQDTGDVMAFTIMRDELLRMLA 142
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: A0A8J5XJX9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJX9_DIALT) HSP 1 Score: 85.9 bits (211), Expect = 4.640e-17 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 1
Query: 25 RVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKTGGNQVERILSRTVGGRVTLDLDVKKMVESNPK--RRSVMVNNGTPMLFTIMRDRLMQILA 393
RV I+GAG GL A A+ A E+ V +K D ++P +GGGVQ+NSGA +LARLGLG AVK G + R+ +RTV LDLD+ + +P+ ++ +G + T+MRD L +LA
Sbjct: 17 RVGIIGAGPAGLAQAIAIRRLVGADVELVVIDKSDQLRPALGGGVQLNSGAAVLARLGLGAAVKRVGQPISRVHARTVDHTTLLDLDLAGAIRQHPRAAESGIVDRDGDVLAVTMMRDALQAMLA 141
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: A0A8J2SB69_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SB69_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 8.900e-17 Identity = 56/123 (45.53%), Postives = 74/123 (60.16%), Query Frame = 1
Query: 22 KRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARL--GLGDAVKTGGNQVERILSRTVGGRVTLDLDVKKMVESNPK--RRSVMVNNGTPMLFTIMRDRL 378
+ + IVGAG GLTLA AL V V +F++ DS +P +GGGVQ+NSGA +LARL LG AV G V R+ SRT GG LDLD+ + N + +R ++ +G +TIMRD L
Sbjct: 24 QTIGIVGAGPAGLTLAVALNRALPDV-AVTIFDRSDSCRPALGGGVQLNSGAAVLARLDPALGAAVAALGQPVRRVRSRTAGGDALLDLDLAAAIRGNARARKRGLVDADGGVRAYTIMRDAL 145
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Match: A0A7S1UMX4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMX4_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 6.480e-14 Identity = 49/129 (37.98%), Postives = 73/129 (56.59%), Query Frame = 1
Query: 22 KRVAIVGAGVGGLTLANALCT---GSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKTGGNQVERILSRTVGGRVTLDLDVKKMVESNPKRRSVMVNNGT---PMLFTIMRDRLMQIL 390
+RVA+VGAG GGL LA AL V++V VFE+ ++PG+GGG+Q++ GA +LA LGL D +K N +E + +RTV L LDV + + +V + + +MRD L ++L
Sbjct: 8 QRVAVVGAGPGGLALARALEALGGAGAGVEDVTVFERRAGLEPGLGGGLQLSGGAAVLAELGLLDELKAIANPLEGVRARTVERATLLTLDVPAAIRRRRDAAAALVKGADGDDTLTYAVMRDALQRML 136 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18522.5783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18522.5783.1 >prot_Ecto-sp13_S_contig18522.5783.1 ID=prot_Ecto-sp13_S_contig18522.5783.1|Name=mRNA_Ecto-sp13_S_contig18522.5783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp MAAAPVVKRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGback to top mRNA from alignment at Ecto-sp13_S_contig18522:2385..3469+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18522.5783.1 ID=mRNA_Ecto-sp13_S_contig18522.5783.1|Name=mRNA_Ecto-sp13_S_contig18522.5783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1085bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18522:2385..3469+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18522:2385..3469+ >mRNA_Ecto-sp13_S_contig18522.5783.1 ID=mRNA_Ecto-sp13_S_contig18522.5783.1|Name=mRNA_Ecto-sp13_S_contig18522.5783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=393bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18522:2385..3469+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |