mRNA_Ecto-sp13_S_contig18414.5730.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18414.5730.1
Unique NamemRNA_Ecto-sp13_S_contig18414.5730.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: D7FQ45_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ45_ECTSI)

HSP 1 Score: 598 bits (1543), Expect = 2.140e-213
Identity = 295/311 (94.86%), Postives = 301/311 (96.78%), Query Frame = 1
Query:    1 MDKQRSGEPSLLPAKRVRWDDSLLPDLTNTSGTASSNKAPPTPPSCSANDAIRLCSAIGRKTAGADEKEGVNEDEGCRPDFTHQLFEEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTSDNDASRTTAILSGLSKALPPENFTMDERKFYEELEGRRRDFKPPGARVYEYSRGGTTFSVYKATGEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGVSLRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGFEKVTRL 933
            MDKQ SG+PSLLPAKRVRWDDS+LPD TNTSGTASSNKAPP PPSCSAN AIR+CSAIG KTAGADEKE VNED GCRPDFTHQLFEEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTS+NDASRTTAILSGLSKALPPENFT DERKFYEELEGRRRDFKPPGARVYEYSRGGTTFSVYKATGEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGVSLRICQALVLPQFQRQGHGKELLSFLYGLARSR+SVFEITVEDPAPGFEK+  L
Sbjct:    1 MDKQCSGDPSLLPAKRVRWDDSVLPDRTNTSGTASSNKAPPAPPSCSANGAIRICSAIGPKTAGADEKEEVNEDVGCRPDFTHQLFEEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTSENDASRTTAILSGLSKALPPENFTTDERKFYEELEGRRRDFKPPGARVYEYSRGGTTFSVYKATGEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGVSLRICQALVLPQFQRQGHGKELLSFLYGLARSRKSVFEITVEDPAPGFEKMRNL 311          
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: A0A8K1FAX9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAX9_PYTOL)

HSP 1 Score: 143 bits (360), Expect = 6.410e-36
Identity = 92/246 (37.40%), Postives = 139/246 (56.50%), Query Frame = 1
Query:  235 PDFTHQLF-EEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTSDNDASRTTAILSGLSKALPPENFTMDERKFYEEL-EGRRRDFKPPGARVYEYSR--GGTT--FSVYKAT-GEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGVSL------RICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGFEKVTRL 933
            P FT+  F +EE+IEG+++  + I + +        ++IQ  D + +R+  I S L+ +LPP+  T D+  F ++L +    DF PPG  V  Y R   GT   F +Y+    ++  A + H   Q L+ WFIE AD ID++D RW V Y+  E  P  ++  K     + G+ T F FRNP+   S       RICQAL+ P +QRQGH + L+ ++YG  ++ E+V+E+TVEDP PGF K+  L
Sbjct:   52 PAFTYHAFGKEEQIEGYDN--LRIEVLFNAFDFSAWLRIQCKDQE-TRSEDIRSKLASSLPPD-VTEDQEAFVQKLKQDADSDFTPPGTLVSSYQRQVDGTEQLFEIYECNLDQNEAAQKLHENLQTLSLWFIEGADGIDVSDPRW-VVYIIYERAPSPIVTAKMSFTPV-GFVTLFKFRNPLGRKSSSATETHRICQALIFPAYQRQGHCERLVEYIYGQVQANENVYEVTVEDPVPGFSKLRDL 291          
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: A0A024TW45_9STRA (Histone acetyltransferase type B catalytic subunit n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW45_9STRA)

HSP 1 Score: 132 bits (332), Expect = 6.280e-32
Identity = 97/269 (36.06%), Postives = 138/269 (51.30%), Query Frame = 1
Query:  142 ANDAIRLCSAIGRKTAGADEKEGVNEDEGCRPDFTHQLF-EEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTSDNDASRTTAILSGLSKALPPENFTMDERKFYEELEGRRRDFKPPGARVYEYSRGGTTFSV-YKATGEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGV---SLRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGFEKVTRL 933
            ANDA+ +C          ++    ++     P FT+  F +EE I G+    +SI + +   + D LV++   + D      I++ ++ +LP + FT D+  F   L       KP G+ V  Y++    F+  Y    ED  A  Y  R Q L+ WFIE AD ID+ D RW V+ LF  +  +G L         AGY T F F  PVK +   SLRICQ LVLP +QRQGHG+ L+ ++   ARS+  V E+TVEDP PGF  +  L
Sbjct:   39 ANDAVLICIV--------NDASNWSDLPSFHPAFTYHAFGKEEIIRGYR--GLSIMLRFNARTFDCLVEVNFDERDEGADD-IIALMANSLP-KGFTQDKDVFLRGLADV--TSKPFGSLVNAYTKDDKEFATHYAVLYEDDAAAAYFDRMQKLSLWFIEGADDIDVRDGRWSVYVLF--DLSRGFLHP-------AGYITVFAFNAPVKQIMMQSLRICQVLVLPPYQRQGHGERLVEYIMHQARSQPIVHEVTVEDPVPGFSMLRDL 284          
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: W4GN24_9STRA (Histone acetyltransferase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GN24_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.600e-31
Identity = 87/230 (37.83%), Postives = 127/230 (55.22%), Query Frame = 1
Query:  235 PDFTHQLF-EEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTSDNDASRTTAILSGLSKALPPENFTMDERKFYEELEGRRRDFKPPGARVYEYSRGGTTFSVYKAT-GEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGV-SLRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGF 915
            P FT+  F ++E I G++   + I + +   + D  V++ T D+  +    +++ +  +LP + FT D+  F   LE      KPPGA V  Y++    F+ Y A   ED  A  Y  R Q L+ WFIE AD ID+ D RW ++ +F  +   G L         AGY T F F  P+  + ++RICQ LVLP +QRQGHG+ L+ ++   ARSR +V E+TVEDP PGF
Sbjct:   42 PAFTYHAFGKDEVIRGYQ--GLCIMLTFNANTFDCFVEV-TFDHRDTDADDVMAMMEHSLP-KGFTQDKEAFLHALE--HSAAKPPGALVNSYTKDDKEFATYFAVLSEDAAAAAYLDRMQKLSLWFIEGADDIDVHDARWSLYVVF--DVSAGYLHP-------AGYITMFTFHAPMTMMQNVRICQVLVLPPYQRQGHGERLVEYIMHQARSRANVHEVTVEDPVPGF 256          
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: A0A6G0XL26_9STRA (Histone acetyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XL26_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.840e-31
Identity = 94/265 (35.47%), Postives = 142/265 (53.58%), Query Frame = 1
Query:  136 CSANDAIRLCSAIGRKTAGADEKEGVNEDEGCRPDFTHQLF-EEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTSDNDASRTTAILSGLSKALPPENFTMDERKFYEELEGRRRDFKPPGARVYEYSRGGTTFSVY-KATGEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVK-GVS--LRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGF 915
            C AN+A+ +           D+ +  ++ +   P FT+  F ++E I G+    + I++ ++  + D LV+I  +  D      I++ ++ +LP +NFT D+  F   L  R    KP G  V  Y++     S Y     EDP    Y  + Q L+ WFIE AD ID+ D RW ++ +F  +  QG    +  P    GY T F F  P+K G+S  +RICQAL+LPQ+QRQGHG+ L+  +   ARS  +V+E+TVEDP PGF
Sbjct:   18 CPANEAVHI-------RIVDDQDKDWSQTKSFHPAFTYHAFGKDEVIRGYH--GLEIQLTFSARTFDCLVEIAYTSRD-DEYDDIITLITNSLP-KNFTQDKEAFLASL--RDAPSKPAGTLVDSYTKDDVEVSTYFTVLSEDPQGRAYLEKMQKLSLWFIEGADDIDVDDPRWSLYVIF--DVSQG----RHLPM---GYITIFTFNTPLKQGMSQNVRICQALILPQYQRQGHGERLVEHIVHQARSMSNVYEVTVEDPVPGF 260          
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: A0A369SES1_9METZ (Histone acetyltransferase type B catalytic subunit n=2 Tax=Trichoplax TaxID=10227 RepID=A0A369SES1_9METZ)

HSP 1 Score: 128 bits (322), Expect = 7.100e-31
Identity = 85/266 (31.95%), Postives = 133/266 (50.00%), Query Frame = 1
Query:  139 SANDAIRLCSAIGRKTAGADEKEGVNEDEGCRPDFTHQLF-EEERIEGFEDGAVSIRIFYTPTSL------DFLVKIQTSDNDASRTTAILSGLSKALPPENFTMDERKFYEELEGRRRDFKPPGARVYEYSRGGTTFSVYKATGEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGVSLRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGF 915
            SAN+AI L     +  +  DE   + + E   P+FTHQLF + E I G++D  + I+++Y  +SL       +  KI  S +D  +   I+  LS  LP + F  ++ ++   LE    +FKP G  +  YS    TF + KA  + PG   YH R +    W+IETA  ID  D++W  + L+ +               + GY T++ +      +  RI Q ++LP +QR GHG +LL   Y LA   +++ +IT EDP+  F
Sbjct:   12 SANEAIHL-----KLVSKGDEV--LEKSESFHPEFTHQLFGDNEAIFGYKD--LEIKLYYGSSSLLTYFGFTYSQKIDPSTSDGVKADDIIQILSDVLP-QGFYTNQDEYMRVLEKEESNFKPFGEIINSYSLDDQTFEIRKANVDIPGFKAYHERLRTFLIWYIETASFIDDDDEKWTFYLLYHKRKDHNAFRYD-----IIGYMTSYNYYAYPDKIRSRISQIIILPPYQRNGHGAKLLESYYSLAEKDDNILDITAEDPSENF 262          
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: UPI001B88B065 (histone acetyltransferase type B catalytic subunit-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B065)

HSP 1 Score: 129 bits (323), Expect = 1.230e-30
Identity = 91/280 (32.50%), Postives = 145/280 (51.79%), Query Frame = 1
Query:  136 CSANDAIRLCSAIGRKTAGADEKEGVNEDEGCRPDFTHQLF-EEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTSDNDAS-----------RTTAILSGLSKALPPENFTMDERKFYEELEGRRRDFKPPGARVYEYS--RGGTT--FSVYKATGEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPA-ALAGYFTAFGFRNPVKGVSLRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGFEKV 924
            C+AN+AI+L           DE +  +  +   P+ THQLF E+E I G++D  +++++FY+   L+  + ++ SD  +                +L+ ++K +PP  FT +   F   L     DFKP GA+++ Y+  + GT   F +YK   E PG   YH R Q    ++I+ A  ID+ DDRW  + LF++    G       P  A+ GY T + +    + +  RI Q L+LP FQ+QGHG +LL   Y    +R  V +ITVEDP+  F+++
Sbjct:   16 CTANEAIQL-------KLVRDESDVEDCKKTFYPEMTHQLFGEQESIFGYKD--LTVQMFYSAAKLNTYINMKYSDKISKDKFFDSGISLPEADNVLATITKHVPP-GFTSNLDDFLTSLADDA-DFKPFGAKLHSYTVHKDGTEREFEIYKTDIECPGFRAYHERLQTFILFYIDAASFIDVDDDRWHYYLLFEKYKSNG------NPMYAIVGYMTVYNYYAYPEKIRPRISQVLILPPFQKQGHGAQLLQTFYNDCYTRSEVLDITVEDPSENFQRL 278          
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: A0A812DKR5_SEPPH (Histone acetyltransferase type B catalytic subunit n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DKR5_SEPPH)

HSP 1 Score: 129 bits (323), Expect = 1.540e-30
Identity = 97/278 (34.89%), Postives = 141/278 (50.72%), Query Frame = 1
Query:  136 CSANDAIRLCSAIGRKTAGADEKEGVNEDEGCRPDFTHQLF-EEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTSDNDASR------TTAILSGLSKALPPENFT-MDERKFYEELEGRRRDFKPPGARVYEYSRGGTT------FSVYKATGED-PGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGVSLRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGFEKV 924
            C AND I             +EK+  NED   RPD THQLF ++E I G+ D  +S+ +FYT  +L   +KI+  D    +         +   ++K +PP   T +DE  F   L  +   F+PPG  ++ Y            F VYKA+ ED P   +YH R Q    +FI+ A  ID+ DDRW  + LF++    G     +R AA+ GY T + +    + +  RI Q L+LP FQ+QGHG +LL   Y    +R  V +ITVEDP+  F+++
Sbjct:   30 CCANDVINF-------KLVREEKDLENEDTTFRPDMTHQLFGDQESIFGYRD--LSLDVFYTAGTLITYLKIKYMDKVTPQKFEGICADDVEKPIAKMMPPGYLTNIDE--FVNAL-SKEDTFRPPGEMLHSYKTENKKDNKVKWFEVYKASIEDTPDFRKYHERLQTFILFFIDAASYIDVDDDRWTFYLLFEKYRINGG----FRYAAV-GYMTVYNYYAYPEKIRPRISQVLILPPFQKQGHGAQLLQTFYNETYTRPEVLDITVEDPSENFQRL 290          
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: V4AGL7_LOTGI (Histone acetyltransferase type B catalytic subunit n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AGL7_LOTGI)

HSP 1 Score: 128 bits (322), Expect = 1.580e-30
Identity = 84/255 (32.94%), Postives = 132/255 (51.76%), Query Frame = 1
Query:  196 DEKEGVNEDEGCRPDFTHQLF-EEERIEGFEDGAVSIRIFYTPT------SLDFLVKIQTSDNDASRTTAILSGLSKALPPENFT-MDERKFYEELEGRRRDFKPPGARVYEYS----RGGTTFSVYKATGEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGVSLRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGFEKV 924
            DE +  + D+  +PD THQ+F E+E I G++D  + ++++YT        S+ ++ K+     D      +L  L++ +PP  +T +D+  F   L  +  +FKP G  ++ Y          F VYK   + PG  +YH+R Q    +FI+ A  ID+ DDRW  F +F++    G         A+AGY T + +         RI Q L+LP FQRQGHG ELL   Y     R+ + +ITVEDP+  F+++
Sbjct:   29 DENDVEDYDKSFKPDMTHQVFGEQESIFGYKD--LEVKMYYTAAKLNTYLSMSYIDKVTPKRFDGLVPDEVLPKLAQEIPPGYYTNLDD--FLATLP-KEVNFKPFGEMLHSYKVKTDGSSRNFEVYKTDIDVPGFRDYHSRLQTFLLFFIDAASYIDVDDDRWNYFLVFEKYRNNGET-----MYAIAGYMTIYNYYAYPNKTRPRISQVLILPPFQRQGHGAELLQTFYNTCYDRDDIMDITVEDPSENFQRL 273          
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Match: A0A0D2WN46_CAPO3 (Histone acetyltransferase type B catalytic subunit n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WN46_CAPO3)

HSP 1 Score: 127 bits (319), Expect = 1.780e-30
Identity = 81/234 (34.62%), Postives = 118/234 (50.43%), Query Frame = 1
Query:  235 PDFTHQLF-EEERIEGFEDGAVSIRIFYTPTSLDFLVKIQTSDNDASRTTAI----LSGLSKALPPENFTMDERKFYEELEGRRRDFKPPGARVYEYSRGG--TTFSVYKATGEDPGACEYHARAQCLAPWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGFRNPVKGVSLRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVEDPAPGF 915
            P+F HQLF + ERI G+ +  ++I++FYT +++  L  +  S+    R        +  L   + PEN   DE  F + L      F P G  +  Y R G  +TF VY+A        E+H R Q    WF++ A  IDL D++W VF +F+        G         GY T + F      +  RI Q LVLP +Q+QGHG+E+L   Y +ARSR  V++++VEDP   F
Sbjct:   10 PEFAHQLFGDNERIFGYRN--LNIKLFYTASAMHPLFSMTYSEKVVKRKGEAGADDVVKLIGDILPENHARDEATFKQRL-SEDAAFVPMGELISSYQREGDDSTFEVYRADCSTQRLAEFHTRIQTFLMWFVDGASFIDLNDNKWTVFLVFKRVANVSADGSNPTRHLFVGYMTTYDFFAYPDRLRPRISQVLVLPPYQKQGHGREMLQAFYRVARSRAEVWDVSVEDPGLAF 240          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18414.5730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ45_ECTSI2.140e-21394.86Histone acetyltransferase n=1 Tax=Ectocarpus silic... [more]
A0A8K1FAX9_PYTOL6.410e-3637.40Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TW45_9STRA6.280e-3236.06Histone acetyltransferase type B catalytic subunit... [more]
W4GN24_9STRA1.600e-3137.83Histone acetyltransferase n=2 Tax=Aphanomyces asta... [more]
A0A6G0XL26_9STRA1.840e-3135.47Histone acetyltransferase n=1 Tax=Aphanomyces eute... [more]
A0A369SES1_9METZ7.100e-3131.95Histone acetyltransferase type B catalytic subunit... [more]
UPI001B88B0651.230e-3032.50histone acetyltransferase type B catalytic subunit... [more]
A0A812DKR5_SEPPH1.540e-3034.89Histone acetyltransferase type B catalytic subunit... [more]
V4AGL7_LOTGI1.580e-3032.94Histone acetyltransferase type B catalytic subunit... [more]
A0A0D2WN46_CAPO31.780e-3034.62Histone acetyltransferase type B catalytic subunit... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18414contigEcto-sp13_S_contig18414:110..3393 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score605.9
Seed ortholog evalue1.1e-170
Seed eggNOG ortholog2880.D7FQ45
Preferred nameHAT1
Model size933
KEGG koko:K11303
KEGG Pathwayko05034,map05034
Hectar predicted targeting categoryother localisation
GOsGO:0000123,GO:0000228,GO:0000302,GO:0000785,GO:0000790,GO:0001558,GO:0003674,GO:0003682,GO:0003824,GO:0004402,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006335,GO:0006336,GO:0006338,GO:0006342,GO:0006348,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007584,GO:0008080,GO:0008150,GO:0008152,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010485,GO:0010556,GO:0010558,GO:0010570,GO:0010605,GO:0010629,GO:0016043,GO:0016363,GO:0016407,GO:0016410,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0030308,GO:0031055,GO:0031248,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031497,GO:0031667,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034080,GO:0034212,GO:0034399,GO:0034508,GO:0034599,GO:0034614,GO:0034622,GO:0034641,GO:0034723,GO:0034724,GO:0034728,GO:0036166,GO:0036211,GO:0040008,GO:0040029,GO:0042221,GO:0042393,GO:0043044,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043933,GO:0043967,GO:0043981,GO:0043982,GO:0043983,GO:0043995,GO:0043996,GO:0043997,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045926,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0060258,GO:0061641,GO:0061733,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070784,GO:0070785,GO:0070887,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:1900428,GO:1900429,GO:1901360,GO:1901564,GO:1901700,GO:1901701,GO:1902493,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2000220,GO:2000221,GO:2001141
Exons6
EggNOG free text desc.chromatin silencing at telomere
EggNOG OGsKOG2696@1,KOG2696@2759
Ec32 ortholog descriptionHAT1-like GNAT family acetyltransferase
Ec32 orthologEc-01_007540.1
EC2.3.1.48
Cds size933
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18414.5730.1prot_Ecto-sp13_S_contig18414.5730.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18414 110..3393 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462946.6361182-CDS-Ecto-sp13_S_contig18414:109..2221681462946.6361182-CDS-Ecto-sp13_S_contig18414:109..222Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18414 110..222 -
1681462946.6493967-CDS-Ecto-sp13_S_contig18414:643..8471681462946.6493967-CDS-Ecto-sp13_S_contig18414:643..847Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18414 644..847 -
1681462946.6682193-CDS-Ecto-sp13_S_contig18414:1243..13851681462946.6682193-CDS-Ecto-sp13_S_contig18414:1243..1385Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18414 1244..1385 -
1681462946.6828883-CDS-Ecto-sp13_S_contig18414:1761..18611681462946.6828883-CDS-Ecto-sp13_S_contig18414:1761..1861Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18414 1762..1861 -
1681462946.7017052-CDS-Ecto-sp13_S_contig18414:2253..24581681462946.7017052-CDS-Ecto-sp13_S_contig18414:2253..2458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18414 2254..2458 -
1681462946.7122061-CDS-Ecto-sp13_S_contig18414:3224..33931681462946.7122061-CDS-Ecto-sp13_S_contig18414:3224..3393Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18414 3225..3393 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18414.5730.1

>prot_Ecto-sp13_S_contig18414.5730.1 ID=prot_Ecto-sp13_S_contig18414.5730.1|Name=mRNA_Ecto-sp13_S_contig18414.5730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp
MDKQRSGEPSLLPAKRVRWDDSLLPDLTNTSGTASSNKAPPTPPSCSAND
AIRLCSAIGRKTAGADEKEGVNEDEGCRPDFTHQLFEEERIEGFEDGAVS
IRIFYTPTSLDFLVKIQTSDNDASRTTAILSGLSKALPPENFTMDERKFY
EELEGRRRDFKPPGARVYEYSRGGTTFSVYKATGEDPGACEYHARAQCLA
PWFIETADAIDLTDDRWEVFYLFQEEPPQGVLGEKWRPAALAGYFTAFGF
RNPVKGVSLRICQALVLPQFQRQGHGKELLSFLYGLARSRESVFEITVED
PAPGFEKVTRL
back to top

mRNA from alignment at Ecto-sp13_S_contig18414:110..3393-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18414.5730.1 ID=mRNA_Ecto-sp13_S_contig18414.5730.1|Name=mRNA_Ecto-sp13_S_contig18414.5730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3284bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18414:110..3393- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACAAGCAGCGTAGCGGTGAACCCAGCTTGCTACCTGCCAAGCGTGT TCGATGGGACGACTCCTTGCTCCCAGATCTGACCAACACGTCCGGGACAG CTAGTTCAAACAAGGCGCCACCTACACCACCATCGTGTAGTGCCAACGAC GCTATCAGGCTTTGTAGTGGTAAGAAACGGGACAGAACTTTATCAATAGC GTACATTCATCCTCTGTCTCTACACGTATGCCGAGAATCTCTTTCCTGTG ATTTCTGCTCGTTTTGAGATCTTCACTGAATTTTTAATTGGCTACGCAAG ATACCACACCCCCTGGCCCAATGTGTTCGCCGTACTCCACGCGAAGAGAG CGCCGAAACAGATAGTCACACGTTTTCGGAAGGCCCTGGACGAGACAAGT CCAATGCCGCCATCATCGACACCGTCCTCCCTGTTTTTACTGCAGGATAG TCGAGTTTTGAAGTTCGGTCGAGGATAGTCGAGTTTTGAAGCTCGGTCGA GCGGCCTAACATACAACCAACACTCTGCACGGCGGTACGGCGGTACACCT CATGGGCAGTCCGATGCACATGATTAGCTGCGTGTCGCATACACACGTTG TACTTCAGAAGAAAAACTCGACGGGACTCGGGCATTAACTTTGTTGAGAA GCATGATGACCAAGACTACCACACTAATAGTCAAGTGGTTTTCGTGCTTC TCAACATGTAGACTTTTCACTGTAGGTGTTCGAGGTTTAGAACCACTGGT CAGCTGAAGATCGTGTGAATAACCAGGACGTCTCCGAGCCGAGAAAAAAT CATGTCGAAAAACGTGAGGGTGATTGAGTAGCGAAGTCTTCGGAGATAGG CGACGATTTGCAAGTACTTCATACACGTTCTCTATCATTACTCATGTTCG ACGTGTGCCCTCCGATCCCGGACGAAAAACGGCAGCCATCGGTCGGAAGA CGGCTGGTGCCGACGAGAAGGAGGGGGTTAACGAAGACGAGGGGTGCCGC CCAGACTTCACACACCAGCTGTTCGAAGAGGAGCGCATCGAGGGTTTCGA GGACGGAGCTGTCAGCATCCGGATTTTCTACACGCCAACTTCGCTTGACT TCCTGGTCAAGATACAAACGAGCGACAACGACGCCAGCAGGTATGGCACT ACAGTACTCCCGTGCACAATTGGCGCCACCACCTGCATCATGAGTTGCTC AGCGAGGTTGGTAGGCATCAGTTCCTGCTTGTGCGGCAGAGCGATTGCGG TATGAACCGTACTTCCCCCGCACCACTCCCCGTCTCTTGTTGCGGTGTAT GCACATACGTGGGTGCGACACGACGACGTTGATTGATGCATGCAAGACGG TAACAGGTGCGGTCCCTTTGCGCAAGGAAAAGTTGATTGCCTATTGCCTA CGTTCCTAGAGGGCGATCGGCATGTTTCCCGTCTGGCTTGTTTTTCCTCT CACATCCCTGTTGCTGCTGCACCCAATCGATCGTGCTGGCGTCTTGCCTG CCTCATCACCTATCGCACTCAATATACCCCAGGACGACCGCTATATTGTC TGGTCTGTCAAAGGCGCTCCCCCCTGAAAACTTCACGATGGATGAGCGGA AGTTCTACGAAGAGCTGGAAGGGAGACGAAGAGTGAGTGGGTGATGTCCA GATTACCGTTTCCACCGCAAGATCGACCTACAGCAGTAGTGCGTGTGTTG TGCTGCGATCAACGCAGTGATCTGCTTGAAGAACCTCTTCTTATAGTGTT GTATATCGAATTCATGTCGTGCATGTTTTGGGACAACACAAAAAGTGCTC TGCTGTGGACAGTGCATCGAGCGGTGTGTTCCTTTGGACGCGCTCTCTAG TGGGCTGTGTAGTCCAAAACCTGCCAAAAGCACCTGAACGTACACGGAAA TCAACACGCAAGACTGATGGAAGGGGTGGTGCTCGAACAGCATCACATCA ATTTCTGATTTGTTCGTTGTTCATTTTCCTCCCATTTCATCCGGTGCACG CCTAATAGGATTTCAAGCCACCTGGTGCCCGCGTCTACGAGTACTCAAGG GGGGGGACAACATTCTCGGTGTACAAAGCCACCGGGGAGGATCCCGGGGC GTGCGAGTACCACGCGCGGGCCCAGTGCCTTGCGCCCTGGTTTATTGAGA GTGAGGAGGTCTGAAGTTTGGAACCCTGCTAGCTACTCGATTTGCTTTTG TGTACACGTCTCTCTGGCCTCTCTTGCCACACACGCTTTCGCTTGTGTCT GGAAGTGCAGTGTGATTGGACAGTCTTCACCTGTTCAACCAGAACGACCT CACAACTAAAGTACTCACAGACGATGAAGGAGTACGGAATAGTCCTCTTA CGGGGTACACCGCCATGATGGCCGTTTCAAGCCTCCTTTTCTTTCCCTTG CCTCCCCTGTAAGAGCTTCGACGACCGAAGTTAGATTATCCCGCGGTTCA CCTCCCCCGTTCCCCCCGATTCCGCGCTCTGCTATGGGCAAAATGAAACA AGCACACCCTTTGACCTCGTAAGCGTGCGCGCCTTTCTGCGCGCAGCCGC CGATGCCATCGACCTGACGGACGACCGCTGGGAGGTGTTCTACTTGTTCC AGGAAGAACCACCACAGGGGGTCTTGGGCGAGAAGTGGAGACCCGCCGCG CTGGCGGGATACTTCACGGCCTTCGGCTTCCGGAACCCAGTCAAGGGTGT CAGCCTGAGGATATGCCAGGCGTTGGTTCTGCCTCAGTTCCAACGACAAG GTGAGTTGTAGGGAGCGCTAGAAGCTTCGGTTGCCCCTGTACGTCCTGGT AATGGCGTGGTTTTACGTTCACTGCCGTTTGGTAAGGTTGACCAATGCCT CGGGACAGCAGTAGTAGTGCAGGTGCGCTTTCCAGCGACCTCAGACAAAA CGTTGAACTTGGACCGCCTTCGTATTGCTTCGGCCTCCGTAGGTTTGCCT CCATGCCAACGTGCGGAGTGCGGTCTGTGCTTGGCTGTGGGACGACATGG CTAGCTCACGGTTCAAGCAGAGTGTCTCAGGGAAAACCAAACAGCAGTTC CCGAGTCCCGACGTTCGCTGTCTACTCGTAGCCTTCTCTGGCCCTTCAAC GGTACAGGAAAGGTTTTTGTCTGAAAATACGAACTCTTGACGGAAAATTT TTGTCCTTCGGCTGTTGCCAGGTCACGGGAAGGAGCTGCTGTCGTTCCTC TACGGCCTGGCCCGCTCGCGTGAGAGCGTGTTCGAGATAACTGTGGAAGA TCCCGCGCCCGGGTTCGAAAAGGTAACACGACTT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18414:110..3393-

>mRNA_Ecto-sp13_S_contig18414.5730.1 ID=mRNA_Ecto-sp13_S_contig18414.5730.1|Name=mRNA_Ecto-sp13_S_contig18414.5730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=933bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18414:110..3393- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACAAGCAGCGTAGCGGTGAACCCAGCTTGCTACCTGCCAAGCGTGT
TCGATGGGACGACTCCTTGCTCCCAGATCTGACCAACACGTCCGGGACAG
CTAGTTCAAACAAGGCGCCACCTACACCACCATCGTGTAGTGCCAACGAC
GCTATCAGGCTTTGTAGTGCCATCGGTCGGAAGACGGCTGGTGCCGACGA
GAAGGAGGGGGTTAACGAAGACGAGGGGTGCCGCCCAGACTTCACACACC
AGCTGTTCGAAGAGGAGCGCATCGAGGGTTTCGAGGACGGAGCTGTCAGC
ATCCGGATTTTCTACACGCCAACTTCGCTTGACTTCCTGGTCAAGATACA
AACGAGCGACAACGACGCCAGCAGGACGACCGCTATATTGTCTGGTCTGT
CAAAGGCGCTCCCCCCTGAAAACTTCACGATGGATGAGCGGAAGTTCTAC
GAAGAGCTGGAAGGGAGACGAAGAGATTTCAAGCCACCTGGTGCCCGCGT
CTACGAGTACTCAAGGGGGGGGACAACATTCTCGGTGTACAAAGCCACCG
GGGAGGATCCCGGGGCGTGCGAGTACCACGCGCGGGCCCAGTGCCTTGCG
CCCTGGTTTATTGAGACCGCCGATGCCATCGACCTGACGGACGACCGCTG
GGAGGTGTTCTACTTGTTCCAGGAAGAACCACCACAGGGGGTCTTGGGCG
AGAAGTGGAGACCCGCCGCGCTGGCGGGATACTTCACGGCCTTCGGCTTC
CGGAACCCAGTCAAGGGTGTCAGCCTGAGGATATGCCAGGCGTTGGTTCT
GCCTCAGTTCCAACGACAAGGTCACGGGAAGGAGCTGCTGTCGTTCCTCT
ACGGCCTGGCCCGCTCGCGTGAGAGCGTGTTCGAGATAACTGTGGAAGAT
CCCGCGCCCGGGTTCGAAAAGGTAACACGACTT
back to top