prot_Ecto-sp13_S_contig18400.5721.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18400.5721.1
Unique Nameprot_Ecto-sp13_S_contig18400.5721.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18400.5721.1 vs. uniprot
Match: D7G5I3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I3_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.640e-79
Identity = 174/249 (69.88%), Postives = 176/249 (70.68%), Query Frame = 0 
Query:    1 RDRARPLRHQHQQQRYYGGG---ARDRSRDRSHGGAYGRDRVWPPSSMSSYSRNGGGAGGDLSRYRRDXXXXXXXXRGPRDFYSRRGRRGSLEDRGREDGSGGRRDRDKPSAXXXXXXXXXXXXXXXAAVDSAATPAKSGSGDKQEAKTTAAASAKAIAVPGSVITVVSDSAKGDDTAQKANLPDLRMVIERSRRRGKMKPSRGQEEGGGEG---PVAVRGRMAGAPGVMRGFSSSGEE-GEQEGKRVG 242
            RDRARPLRHQ             ARDRSRDRSHGGAYGRDR WPPSSMSSY                 XXXXXXXXRGPRDFYSRRGRRGSLEDRGREDGSGGRRDRDKPSA                AVDSAATP KSG+ DK+E K T A S KAIAVPGSVITVVSDSAKGDDTAQKANLPDLRMVIERSRRRGKMKP RGQE         PV  RGRMAGAPGVMR FSSSGEE G   G R G
Sbjct:  277 RDRARPLRHQXXXXXXXXXXXXXARDRSRDRSHGGAYGRDRDWPPSSMSSYXXXXXXXXXXXXXXXXXXXXXXXXXRGPRDFYSRRGRRGSLEDRGREDGSGGRRDRDKPSAGRGGDGGMQGKEGRGTAVDSAATPGKSGNDDKEEPKATTATSVKAIAVPGSVITVVSDSAKGDDTAQKANLPDLRMVIERSRRRGKMKPPRGQEXXXXXXXXXPVVARGRMAGAPGVMRAFSSSGEEDGADNGTREG 525
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BLAST of mRNA_Ecto-sp13_S_contig18400.5721.1 vs. uniprot
Match: A0A6H5L076_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L076_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 4.080e-40
Identity = 98/123 (79.67%), Postives = 101/123 (82.11%), Query Frame = 0 
Query:  125 AAVDSAATPAKSGSGDKQEAKTTAAASAKAIAVPGSVITVVSDSAKGDDTAQKANLPDLRMVIERSRRRGKMKPSRGQEE--GGGEGPVAVRGRMAGAPGVMRGFSSSGE--EGEQEG--KRV 241
            AAVDSAA+P KSGS  K+EAK T AAS KAIAVPGSVITVVSDSAKG+DTAQKANLPDLR VIERSRRRGKM PSRGQEE  G GEGPV  RGRMAGAPGVMRGFS S E   G  EG  KRV
Sbjct:  396 AAVDSAASPGKSGSDGKEEAKATTAASTKAIAVPGSVITVVSDSAKGNDTAQKANLPDLRTVIERSRRRGKMNPSRGQEEEKGEGEGPVVARGRMAGAPGVMRGFSPSDEADNGTSEGGVKRV 518
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18400.5721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5I3_ECTSI1.640e-7969.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L076_9PHAE4.080e-4079.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18400contigEcto-sp13_S_contig18400:241..2909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18400.5721.1mRNA_Ecto-sp13_S_contig18400.5721.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18400 241..2909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18400.5721.1 ID=prot_Ecto-sp13_S_contig18400.5721.1|Name=mRNA_Ecto-sp13_S_contig18400.5721.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
RDRARPLRHQHQQQRYYGGGARDRSRDRSHGGAYGRDRVWPPSSMSSYSR
NGGGAGGDLSRYRRDRERSRDRDRGPRDFYSRRGRRGSLEDRGREDGSGG
RRDRDKPSAGRGGDGGGQGKEGRGAAVDSAATPAKSGSGDKQEAKTTAAA
SAKAIAVPGSVITVVSDSAKGDDTAQKANLPDLRMVIERSRRRGKMKPSR
GQEEGGGEGPVAVRGRMAGAPGVMRGFSSSGEEGEQEGKRVG
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