prot_Ecto-sp13_S_contig18393.5714.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18393.5714.1
Unique Nameprot_Ecto-sp13_S_contig18393.5714.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18393.5714.1 vs. uniprot
Match: D7G3K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K7_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 1.630e-127
Identity = 202/206 (98.06%), Postives = 202/206 (98.06%), Query Frame = 0 
Query:    1 SNNSSTGGPSGXXXXXXXXGGPWDTKIVVSLPKDPMGERHETGRAGKTSNPVWDQAVVLRDIEYSELVRVEMRRPRKIGENPVLASVEFEVHDVIGLSLREGASVFQLECDRSRARYGIILLAFRFDPPVAADVLGALDGVGLASLPRGVTTPADQG-DEGEKAPAWGAPEAGQQAEREVEVAEPVYINVEGHFACLLLDDDTPLN 205
            SNNSSTGGP  XXXXXXX GGPWDTKIVVSLPKDPMGERHETGRAGKTSNPVWDQAVVLRDIEYSELVRVEMRRPRKIGENPVLASVEFEVHDVIGLSLREGASVFQLECDRSRARYGIILLAFRFDPPVAADVLGALDGVGLASLPRGVTTPADQG DEGEKAPAWGAPEAGQQAEREVEVAEPVYINVEGHFACLLLDDDTPLN
Sbjct:   37 SNNSSTGGPXXXXXXXXXGGGPWDTKIVVSLPKDPMGERHETGRAGKTSNPVWDQAVVLRDIEYSELVRVEMRRPRKIGENPVLASVEFEVHDVIGLSLREGASVFQLECDRSRARYGIILLAFRFDPPVAADVLGALDGVGLASLPRGVTTPADQGHDEGEKAPAWGAPEAGQQAEREVEVAEPVYINVEGHFACLLLDDDTPLN 242
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18393.5714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3K7_ECTSI1.630e-12798.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 20..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18393contigEcto-sp13_S_contig18393:4..3274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18393.5714.1mRNA_Ecto-sp13_S_contig18393.5714.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18393 4..3275 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18393.5714.1 ID=prot_Ecto-sp13_S_contig18393.5714.1|Name=mRNA_Ecto-sp13_S_contig18393.5714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
SNNSSTGGPSGSSSGSTGGGGPWDTKIVVSLPKDPMGERHETGRAGKTSN
PVWDQAVVLRDIEYSELVRVEMRRPRKIGENPVLASVEFEVHDVIGLSLR
EGASVFQLECDRSRARYGIILLAFRFDPPVAADVLGALDGVGLASLPRGV
TTPADQGDEGEKAPAWGAPEAGQQAEREVEVAEPVYINVEGHFACLLLDD
DTPLN
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