mRNA_Ecto-sp13_S_contig18339.5695.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: D7G860_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G860_ECTSI) HSP 1 Score: 308 bits (790), Expect = 1.700e-103 Identity = 181/214 (84.58%), Postives = 182/214 (85.05%), Query Frame = 1
Query: 70 VASLSALIAGFALVAMVEVNIPSDVNAVLLIFFGSTAASVVGLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFLSNAKLDLHIIQAQDEXXXXXXXXXS----GHGGKNGGDGRWRRVGEGGGAEVDARRAAAGGAVSRA 699
VASLSALIAGFALVAMVEV GLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFLSNAKLDLHIIQAQDEXXXXXXXXX HGGKNGGDGRWRR+GEGGGA DARRAAAG VSRA
Sbjct: 59 VASLSALIAGFALVAMVEV----------------------GLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFLSNAKLDLHIIQAQDEXXXXXXXXXXXXXXAHGGKNGGDGRWRRLGEGGGAGADARRAAAGAVVSRA 250
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: A0A836C9P0_9STRA (Calcium release-activated calcium channel protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9P0_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.180e-47 Identity = 88/175 (50.29%), Postives = 123/175 (70.29%), Query Frame = 1
Query: 4 VWWRGVNDRKREVEEKAKQLEQVASLSALIAGFALVAMVEVNIPSDVNAVLLIFFGSTAASVVGLMLLAMLSSTFMLVAIMKYDVK-AKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHR---VAAGAISVIALLSTLIFYAYTYRKWGPFLS 516
+W R V+++ +EEKAKQLEQ+A LSAL+AGFALVAM ++ IP VN LL+ FG+ A+ VG+ L+AMLSST +LVA++KYD K A + P F FW++ CE+DWR SFR FNI I LF+ VL +VGWI AH+ ++ ++V+A+ S ++++ YTYRKW FL+
Sbjct: 30 LWCRWVDEQWHAMEEKAKQLEQIAQLSALLAGFALVAMCQMQIPDGVNGWLLVSFGTVTAAAVGVPLIAMLSSTLVLVAVIKYDPKVAVNAACPDFGTFWSTHCEADWRLSFRCFNISIALFLMVLGQVGWIQFF----AHQNYVASSTLVTVVAVASAMVYFLYTYRKWSTFLA 200
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: A0A6S9GQE6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9GQE6_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.680e-44 Identity = 83/161 (51.55%), Postives = 119/161 (73.91%), Query Frame = 1
Query: 52 AKQLEQVASLSALIAGFALVAMVEVNIPSDVNAVLLIFFGSTAASVVGLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFL--SNAKL 528
A+QL+ V++ SALIAGF++V +VEV IP ++N VLL+ FG T A+VVGLML AML+STFMLVAI++YD R P F +FW +RCESDW+F+ RAF G+PLF+ VLA++GW+ + A +A+ ++ +A+ + +I++A+T RKW FL S+AKL
Sbjct: 61 AQQLKAVSNQSALIAGFSMVVLVEVQIPKNMNPVLLVTFGCTTAAVVGLMLTAMLNSTFMLVAILRYD--CVQREVP-FAKFWRTRCESDWKFALRAFAYGVPLFLCVLAQIGWVVFWEHQSARYIASSLVTFVAMCTIIIWFAHTERKWRDFLLRSDAKL 218
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: A0A7S4NBN3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NBN3_9STRA) HSP 1 Score: 156 bits (395), Expect = 3.450e-44 Identity = 81/162 (50.00%), Postives = 116/162 (71.60%), Query Frame = 1
Query: 49 KAKQLEQVASLSALIAGFALVAMVEVNIPSDVNAVLLIFFGSTAASVVGLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFLSNAKLDL 534
KA+QL+ V+ SALIAGF++V +VEV IPSD++ VLL+ FG T A VV LML++ML+STF+LVAI++YD ++ F FW RCESDW+F+ RAF +PLFM VLA++GW+ D A A+ I+VIA+++ + ++A+T RKWG FL +++ L
Sbjct: 49 KAQQLKAVSHQSALIAGFSMVVLVEVQIPSDLHPVLLVMFGCTTAGVVSLMLVSMLNSTFVLVAILRYDCVRREA---PFAEFWRKRCESDWKFALRAFGYAVPLFMCVLAQIGWVVFWDHESARIYASTLITVIAMVTIVFWFAHTDRKWGGFLLSSEARL 207
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: A0A6U0JNC6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JNC6_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.650e-42 Identity = 76/163 (46.63%), Postives = 115/163 (70.55%), Query Frame = 1
Query: 49 KAKQLEQVASLSALIAGFALVAMVEVNIPSDVNAVLLIFFGSTAASVVGLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFLSNAKLDLH 537
KA+QL+ V+ SALIAGF++V +VE+ IP+D++ LL+ FG T A VV LML+AML++T++LVAI++YD ++ F FW RCESDW+ + +AF +G+PLF+ VLA +GW+ D A A+ ++ IAL++ L+++A+T RKWG FL + + LH
Sbjct: 50 KAQQLKAVSHQSALIAGFSMVVLVEIQIPTDLSPGLLVTFGCTTAGVVSLMLIAMLNATYILVAILRYDCVKRET---PFSDFWRKRCESDWQLALKAFGLGVPLFLCVLALIGWVIFWDHESARYYASALVTTIALVTLLLWFAHTDRKWGKFLMSTEAKLH 209
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: A0A7S2S1Q7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q7_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.190e-40 Identity = 74/168 (44.05%), Postives = 116/168 (69.05%), Query Frame = 1
Query: 46 EKAKQLEQVASLSALIAGFALVAMVEVNIPSDVNAVLLIFFGSTAASVVGLMLLAMLSSTFMLVAIMKYDVKA--------KDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHR-VAAGAISVIALLSTLIFYAYTYRKWGPFLSNA 522
EKA+QL+ ++ LSALIAGFA++ MVE+ +P D++ LL+ FG T+A VVGLML+AMLSST +L+AI+K+D K+ + + SF+ FW + CE DW+ +++AF G+PLFM VLA++GWI V R +AA ++++A L++ ++ + KWG F+ ++
Sbjct: 56 EKAEQLKAISHLSALIAGFAMIVMVEIQLPDDLHLGLLVIFGGTSAGVVGLMLIAMLSSTMVLIAILKFDCKSVADTASSGRPPRFQSFEEFWTTLCEDDWQMAYQAFTKGVPLFMCVLAQLGWIIFHGYGVKDRNIAASIVTIVAALTSCWWFTHAVSKWGYFIKHS 223
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: K0S0L8_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0L8_THAOC) HSP 1 Score: 118 bits (296), Expect = 1.570e-28 Identity = 63/155 (40.65%), Postives = 97/155 (62.58%), Query Frame = 1
Query: 49 KAKQLEQVASLSALIAGFALVAMVEVNIPSDVNAVLLIFFGSTAASVVGLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFL 513
KA+QL+ VA+ AL AGF++V +VE +IP +N LL FGS A + L L++ L+ST++LVAI++YD +D F FW RCE DW+ + R F+ G+P F+ V++ V W+T + + V+A ++ I++ TL ++ T RKW FL
Sbjct: 46 KAQQLQVVANQGALFAGFSMVVLVESSIPEALNGALLAVFGSAVAMTIALFLVSTLNSTYILVAILRYDCVRRD---VPFSEFWNKRCEPDWKIALRCFSYGVPSFLLVVSLVAWVTFWEAE-SGFVSASVVTTISMAVTLFWFGRTDRKWRGFL 196
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: A0A7S2CAC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAC6_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.130e-28 Identity = 58/137 (42.34%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 157 LIFFGSTAASVVGLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITL---DDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFLSNAKLDLHIIQAQDE 558
L+ FG+T+A VVGLML+AML+ T ML+AI+KYD ++ P F FW CE DW F++R+F G+PLFM VLA++GWI DD + + A AI+ +A ++ +++ +T KWG F+ +A D+ ++Q + +
Sbjct: 1 LMLFGTTSALVVGLMLIAMLNCTMMLIAILKYDCVNRN---PPFHTFWRVHCEDDWHFAYRSFTFGLPLFMCVLAQIGWIQFHKYDDST--RNLGASAITFVAAVTFSLWFLHTKSKWGNFIRDA--DVKLVQEESQ 130
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: A0A7S1BSJ4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSJ4_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.960e-26 Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 1
Query: 49 KAKQLEQVASLSALIAGFALVAMVEVNIPSDVNAVLLIFFGSTAASVVGLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKW 501
K++QL+ V+ LSALIAGFA+V +VE++IP + LL+ FG + V+ LML+AML++ MLVAI KYD R P F FW RCE+D+ ++ RAF +G+P+F+ VL VGW+ D + +++ IA+ + +++ +T RKW
Sbjct: 47 KSQQLKAVSHLSALIAGFAMVVLVEISIPENFPGPLLMAFGVATSIVISLMLVAMLNACLMLVAINKYDCIR--REIP-FNVFWRKRCETDFVYALRAFLLGVPVFICVLGLVGWVVFWDRDWGVA-CSSSVTAIAVATVGLWFGHTERKW 193
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Match: A0A2R5G3Z6_9STRA (Calcium release-activated calcium channel protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3Z6_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.520e-24 Identity = 65/174 (37.36%), Postives = 110/174 (63.22%), Query Frame = 1
Query: 1 QVWWRGVNDRKREVEEKAKQLEQVASLSALIAGFALVAMVEVNIPS-DVNAVLLIFFGSTAASVVGLMLLAMLSSTFMLVAIMK-YDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFLS 516
++ +R + +R+++EK +QL +A+L+ALIAGF++V ++E+NIPS DV AVL+ + + A V +M L+ + T MLV ++K +D+ +R FQ+FW RCE DW +F F IG+P+FM LA GW+ + + AG I+VI ++ ++++ + KWG +L+
Sbjct: 24 EIKYRKLEILRRQIDEKVEQLRSIANLAALIAGFSVVVLIELNIPSNDVPAVLIGLWALSTAITVCIMSLSFVICTLMLVGVLKAFDL---ERAKMPFQQFWVLRCEEDWMRAFWFFTIGVPMFMLNLALAGWVLFFE----YLPIAGLITVICAVA-IMYWLSIHLKWGSYLA 189 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18339.5695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18339.5695.1 >prot_Ecto-sp13_S_contig18339.5695.1 ID=prot_Ecto-sp13_S_contig18339.5695.1|Name=mRNA_Ecto-sp13_S_contig18339.5695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=234bp QVWWRGVNDRKREVEEKAKQLEQVASLSALIAGFALVAMVEVNIPSDVNAback to top mRNA from alignment at Ecto-sp13_S_contig18339:699..3386- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18339.5695.1 ID=mRNA_Ecto-sp13_S_contig18339.5695.1|Name=mRNA_Ecto-sp13_S_contig18339.5695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2688bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18339:699..3386- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18339:699..3386- >mRNA_Ecto-sp13_S_contig18339.5695.1 ID=mRNA_Ecto-sp13_S_contig18339.5695.1|Name=mRNA_Ecto-sp13_S_contig18339.5695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=702bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18339:699..3386- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |